RNA–Protein interactions for RNA: ENST00000541713.5

PTPN1-202, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

TSL 2 BASIC

Gene PTPN1, Length 3,469 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-202ENST00000541713 EML1O00423 815 aa14.89□□□□□ -0.03
PTPN1-202ENST00000541713 ATP2C2O75185 946 aa14.89□□□□□ -0.03
PTPN1-202ENST00000541713 TAF4BQ92750 862 aa14.89□□□□□ -0.03
PTPN1-202ENST00000541713 MYO1CO00159 1063 aa14.88□□□□□ -0.03
PTPN1-202ENST00000541713 NOL4O94818 638 aa14.88□□□□□ -0.03
PTPN1-202ENST00000541713 KLHDC7AQ5VTJ3 777 aa14.88□□□□□ -0.03
PTPN1-202ENST00000541713 FBXO11Q86XK2 927 aa14.88□□□□□ -0.03
PTPN1-202ENST00000541713 CSRNP1Q96S65 589 aa14.88□□□□□ -0.03
PTPN1-202ENST00000541713 DDX47Q9H0S4 455 aaKnown RBP14.88□□□□□ -0.03
PTPN1-202ENST00000541713 RRP15Q9Y3B9 282 aaKnown RBP14.88□□□□□ -0.03
PTPN1-202ENST00000541713 NDUFB10O96000 172 aa14.88□□□□□ -0.03
PTPN1-202ENST00000541713 FXR2P51116 673 aaKnown RBP eCLIP14.88□□□□□ -0.031e-7■□□□□ 8.8
PTPN1-202ENST00000541713 ZNF211Q13398 564 aaPredicted RBP14.88□□□□□ -0.03
PTPN1-202ENST00000541713 ABCB5Q2M3G0 1257 aa14.88□□□□□ -0.03
PTPN1-202ENST00000541713 AJAP1Q9UKB5 411 aaPredicted RBP14.88□□□□□ -0.03
PTPN1-202ENST00000541713 POLRMTO00411 1230 aaKnown RBP14.87□□□□□ -0.03
PTPN1-202ENST00000541713 AKAP3O75969 853 aa14.87□□□□□ -0.03
PTPN1-202ENST00000541713 ZNF746Q6NUN9 644 aaPredicted RBP14.87□□□□□ -0.03
PTPN1-202ENST00000541713 LRRC31Q6UY01 552 aa14.87□□□□□ -0.03
PTPN1-202ENST00000541713 RETREG2Q8NC44 543 aa14.87□□□□□ -0.03
PTPN1-202ENST00000541713 FAM76AQ8TAV0 307 aa14.87□□□□□ -0.03
PTPN1-202ENST00000541713 FAM71BQ8TC56 605 aa14.87□□□□□ -0.03
PTPN1-202ENST00000541713 DHX36Q9H2U1 1008 aaKnown RBP14.87□□□□□ -0.03
PTPN1-202ENST00000541713 PVALEFA0A1B0GWK0 134 aa14.87□□□□□ -0.03
PTPN1-202ENST00000541713 MYL1P05976 194 aa14.87□□□□□ -0.03
PTPN1-202ENST00000541713 FECHP22830 423 aa14.87□□□□□ -0.03
PTPN1-202ENST00000541713 SYCP3Q8IZU3 236 aa14.87□□□□□ -0.03
PTPN1-202ENST00000541713 BANK1Q8NDB2 785 aa14.87□□□□□ -0.03
PTPN1-202ENST00000541713 UBXN6Q9BZV1 441 aa14.87□□□□□ -0.03
PTPN1-202ENST00000541713 ACP6Q9NPH0 428 aa14.87□□□□□ -0.03
PTPN1-202ENST00000541713 A0A1B0GUL6 1792 aa14.87□□□□□ -0.03
PTPN1-202ENST00000541713 GNGT1P63211 74 aa14.87□□□□□ -0.03
PTPN1-202ENST00000541713 EXOC3L4Q17RC7 722 aa14.87□□□□□ -0.03
PTPN1-202ENST00000541713 HNRNPLLQ8WVV9 542 aaKnown RBP14.87□□□□□ -0.03
PTPN1-202ENST00000541713 COL16A1Q07092 1604 aaPredicted RBP14.87□□□□□ -0.03
PTPN1-202ENST00000541713 FAM13AO94988 1023 aa14.86□□□□□ -0.03
PTPN1-202ENST00000541713 XRCC5P13010 732 aaKnown RBP14.86□□□□□ -0.03
PTPN1-202ENST00000541713 LRRC63Q05C16 580 aa14.86□□□□□ -0.03
PTPN1-202ENST00000541713 PRMT6Q96LA8 375 aaPredicted RBP14.86□□□□□ -0.03
PTPN1-202ENST00000541713 GOPCQ9HD26 462 aa14.86□□□□□ -0.03
PTPN1-202ENST00000541713 APBA3O96018 575 aa14.86□□□□□ -0.03
PTPN1-202ENST00000541713 GABPAQ06546 454 aa14.86□□□□□ -0.03
PTPN1-202ENST00000541713 HGSNATQ68CP4 663 aa14.86□□□□□ -0.03
PTPN1-202ENST00000541713 SH3BP5LQ7L8J4 393 aa14.86□□□□□ -0.03
PTPN1-202ENST00000541713 DYDC2Q96IM9 177 aa14.86□□□□□ -0.03
PTPN1-202ENST00000541713 CELF4Q9BZC1 486 aaKnown RBP14.86□□□□□ -0.03
PTPN1-202ENST00000541713 CWC15Q9P013 229 aaKnown RBP14.86□□□□□ -0.03
PTPN1-202ENST00000541713 GCNT4Q9P109 453 aa14.86□□□□□ -0.03
PTPN1-202ENST00000541713 A0A1W2PRG0 241 aa14.86□□□□□ -0.03
PTPN1-202ENST00000541713 AGPSO00116 658 aa14.86□□□□□ -0.03
PTPN1-202ENST00000541713 CALCAP01258 141 aa14.86□□□□□ -0.03
PTPN1-202ENST00000541713 RRP1BQ14684 758 aaKnown RBP14.86□□□□□ -0.03
PTPN1-202ENST00000541713 ZNF571Q7Z3V5 609 aaPredicted RBP14.86□□□□□ -0.03
PTPN1-202ENST00000541713 GLYCTKQ8IVS8 523 aa14.86□□□□□ -0.03
PTPN1-202ENST00000541713 TSGA10Q9BZW7 698 aa14.86□□□□□ -0.03
PTPN1-202ENST00000541713 COA1Q9GZY4 146 aa14.86□□□□□ -0.03
PTPN1-202ENST00000541713 PLCH1Q4KWH8 1693 aa14.86□□□□□ -0.03
PTPN1-202ENST00000541713 MEIS2O14770 477 aa14.85□□□□□ -0.03
PTPN1-202ENST00000541713 LIG3P49916 1009 aa14.85□□□□□ -0.03
PTPN1-202ENST00000541713 CFAP221Q4G0U5 840 aa14.85□□□□□ -0.03
PTPN1-202ENST00000541713 GPATCH4Q5T3I0 446 aaKnown RBP14.85□□□□□ -0.03
PTPN1-202ENST00000541713 HAUS3Q68CZ6 603 aa14.85□□□□□ -0.03
PTPN1-202ENST00000541713 DAAM2Q86T65 1068 aa14.85□□□□□ -0.03
PTPN1-202ENST00000541713 COL23A1Q86Y22 540 aaPredicted RBP14.85□□□□□ -0.03
PTPN1-202ENST00000541713 BCAS4Q8TDM0 211 aa14.85□□□□□ -0.03
PTPN1-202ENST00000541713 STIM2Q9P246 746 aa14.85□□□□□ -0.03
PTPN1-202ENST00000541713 GOLGA8IPA6NC78 632 aa14.85□□□□□ -0.03
PTPN1-202ENST00000541713 GOLGA8JA6NMD2 632 aa14.85□□□□□ -0.03
PTPN1-202ENST00000541713 HSF2BPO75031 334 aa14.85□□□□□ -0.03
PTPN1-202ENST00000541713 ITGA4P13612 1032 aa14.85□□□□□ -0.03
PTPN1-202ENST00000541713 PDIA5Q14554 519 aa14.85□□□□□ -0.03
PTPN1-202ENST00000541713 ODF2Q5BJF6 829 aa14.85□□□□□ -0.03
PTPN1-202ENST00000541713 IQCEQ6IPM2 695 aa14.85□□□□□ -0.03
PTPN1-202ENST00000541713 GOLGA5Q8TBA6 731 aa14.85□□□□□ -0.03
PTPN1-202ENST00000541713 AMNQ9BXJ7 453 aa14.85□□□□□ -0.03
PTPN1-202ENST00000541713 GLIS2Q9BZE0 524 aaPredicted RBP14.85□□□□□ -0.03
PTPN1-202ENST00000541713 OSGEPQ9NPF4 335 aa14.85□□□□□ -0.03
PTPN1-202ENST00000541713 USP20Q9Y2K6 914 aa14.85□□□□□ -0.03
PTPN1-202ENST00000541713 ATP6V0A2Q9Y487 856 aa14.85□□□□□ -0.03
PTPN1-202ENST00000541713 MSH4O15457 936 aa14.85□□□□□ -0.03
PTPN1-202ENST00000541713 GUCY1A3Q02108 690 aa14.85□□□□□ -0.03
PTPN1-202ENST00000541713 TUBB2AQ13885 445 aa14.85□□□□□ -0.03
PTPN1-202ENST00000541713 ALKBH5Q6P6C2 394 aaKnown RBP14.85□□□□□ -0.03
PTPN1-202ENST00000541713 PLCD3Q8N3E9 789 aa14.85□□□□□ -0.03
PTPN1-202ENST00000541713 TUBB2BQ9BVA1 445 aa14.85□□□□□ -0.03
PTPN1-202ENST00000541713 MAGEF1Q9HAY2 307 aa14.85□□□□□ -0.03
PTPN1-202ENST00000541713 FAM198AQ9UFP1 575 aa14.85□□□□□ -0.03
PTPN1-202ENST00000541713 C21orf2O43822 256 aa14.84□□□□□ -0.03
PTPN1-202ENST00000541713 RPS6KA1Q15418 735 aa14.84□□□□□ -0.03
PTPN1-202ENST00000541713 NBPF9Q3BBW0 867 aa14.84□□□□□ -0.03
PTPN1-202ENST00000541713 CFAP58Q5T655 872 aa14.84□□□□□ -0.03
PTPN1-202ENST00000541713 AADACL2Q6P093 401 aa14.84□□□□□ -0.03
PTPN1-202ENST00000541713 HOOK2Q96ED9 719 aa14.84□□□□□ -0.03
PTPN1-202ENST00000541713 RABGAP1Q9Y3P9 1069 aa14.84□□□□□ -0.03
PTPN1-202ENST00000541713 PHLPP1O60346 1717 aa14.84□□□□□ -0.03
PTPN1-202ENST00000541713 TLDC2A0PJX2 215 aa14.84□□□□□ -0.03
PTPN1-202ENST00000541713 SSTR3P32745 418 aaPredicted RBP14.84□□□□□ -0.03
PTPN1-202ENST00000541713 GIT2Q14161 759 aa14.84□□□□□ -0.03
PTPN1-202ENST00000541713 TMEM119Q4V9L6 283 aa14.84□□□□□ -0.03
PTPN1-202ENST00000541713 WDR93Q6P2C0 686 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms