RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 COPS5Q92905 334 aa31.1■■■□□ 2.57
CCM2-218ENST00000541586 SLC5A5Q92911 643 aa31.1■■■□□ 2.57
CCM2-218ENST00000541586 CDK5RAP3Q96JB5 506 aa31.1■■■□□ 2.57
CCM2-218ENST00000541586 CDHR1Q96JP9 859 aa31.1■■■□□ 2.57
CCM2-218ENST00000541586 DDX41Q9UJV9 622 aaKnown RBP31.1■■■□□ 2.57
CCM2-218ENST00000541586 RBM47A0AV96 593 aaKnown RBP31.1■■■□□ 2.57
CCM2-218ENST00000541586 MAFGO15525 162 aa31.1■■■□□ 2.57
CCM2-218ENST00000541586 ADCY6O43306 1168 aa31.1■■■□□ 2.57
CCM2-218ENST00000541586 TGFB3P10600 412 aa31.1■■■□□ 2.57
CCM2-218ENST00000541586 RNF208Q9H0X6 261 aa31.1■■■□□ 2.57
CCM2-218ENST00000541586 MAGEF1Q9HAY2 307 aa31.1■■■□□ 2.57
CCM2-218ENST00000541586 MAN1B1Q9UKM7 699 aa31.1■■■□□ 2.57
CCM2-218ENST00000541586 ICAM3P32942 547 aa31.09■■■□□ 2.57
CCM2-218ENST00000541586 CCDC62Q6P9F0 684 aa31.09■■■□□ 2.57
CCM2-218ENST00000541586 KCNV1Q6PIU1 500 aa31.09■■■□□ 2.57
CCM2-218ENST00000541586 ZNF333Q96JL9 665 aa31.09■■■□□ 2.57
CCM2-218ENST00000541586 ZNF577Q9BSK1 485 aa31.09■■■□□ 2.57
CCM2-218ENST00000541586 BCAS3Q9H6U6 928 aa31.09■■■□□ 2.57
CCM2-218ENST00000541586 KBTBD4Q9NVX7 518 aa31.09■■■□□ 2.57
CCM2-218ENST00000541586 LRRC37A2A6NM11 1700 aa31.09■■■□□ 2.57
CCM2-218ENST00000541586 GTPBP6O43824 516 aaPredicted RBP31.08■■■□□ 2.57
CCM2-218ENST00000541586 PSMD10O75832 226 aa31.08■■■□□ 2.57
CCM2-218ENST00000541586 CCL5P13501 91 aa31.08■■■□□ 2.57
CCM2-218ENST00000541586 TMEM119Q4V9L6 283 aa31.08■■■□□ 2.57
CCM2-218ENST00000541586 NCAPH2Q6IBW4 605 aa31.08■■■□□ 2.57
CCM2-218ENST00000541586 BLZF1Q9H2G9 400 aa31.08■■■□□ 2.57
CCM2-218ENST00000541586 AGO4Q9HCK5 861 aaKnown RBP31.08■■■□□ 2.57
CCM2-218ENST00000541586 CCT6AP40227 531 aaKnown RBP31.07■■■□□ 2.56
CCM2-218ENST00000541586 CUL4BQ13620 913 aa31.07■■■□□ 2.56
CCM2-218ENST00000541586 ECM1Q16610 540 aa31.07■■■□□ 2.56
CCM2-218ENST00000541586 UVSSAQ2YD98 709 aa31.07■■■□□ 2.56
CCM2-218ENST00000541586 DUSP28Q4G0W2 176 aa31.07■■■□□ 2.56
CCM2-218ENST00000541586 LRCH2Q5VUJ6 765 aa31.07■■■□□ 2.56
CCM2-218ENST00000541586 LUZP1Q86V48 1076 aa31.07■■■□□ 2.56
CCM2-218ENST00000541586 XRN2Q9H0D6 950 aaKnown RBP eCLIP31.07■■■□□ 2.56
CCM2-218ENST00000541586 KIAA1217Q5T5P2 1943 aa31.07■■■□□ 2.56
CCM2-218ENST00000541586 HYIQ5T013 277 aa31.07■■■□□ 2.56
CCM2-218ENST00000541586 CYFIP1Q7L576 1253 aa31.07■■■□□ 2.56
CCM2-218ENST00000541586 ARMC5Q96C12 935 aa31.07■■■□□ 2.56
CCM2-218ENST00000541586 BLOC1S4Q9NUP1 217 aa31.07■■■□□ 2.56
CCM2-218ENST00000541586 STK17AQ9UEE5 414 aa31.07■■■□□ 2.56
CCM2-218ENST00000541586 KDM3AQ9Y4C1 1321 aa31.06■■■□□ 2.56
CCM2-218ENST00000541586 IPO5O00410 1097 aaKnown RBP31.06■■■□□ 2.56
CCM2-218ENST00000541586 DYNC1LI2O43237 492 aaPredicted RBP31.06■■■□□ 2.56
CCM2-218ENST00000541586 SLC26A4O43511 780 aa31.06■■■□□ 2.56
CCM2-218ENST00000541586 RARBP10826 455 aa31.06■■■□□ 2.56
CCM2-218ENST00000541586 BMP6P22004 513 aa31.06■■■□□ 2.56
CCM2-218ENST00000541586 UBA1P22314 1058 aaKnown RBP31.06■■■□□ 2.56
CCM2-218ENST00000541586 TRIML1Q8N9V2 468 aa31.06■■■□□ 2.56
CCM2-218ENST00000541586 GSDMAQ96QA5 445 aa31.06■■■□□ 2.56
CCM2-218ENST00000541586 NAT10Q9H0A0 1025 aaKnown RBP31.06■■■□□ 2.56
CCM2-218ENST00000541586 DDX20Q9UHI6 824 aaKnown RBP31.06■■■□□ 2.56
CCM2-218ENST00000541586 DDX39AO00148 427 aaKnown RBP31.05■■■□□ 2.56
CCM2-218ENST00000541586 GGPS1O95749 300 aa31.05■■■□□ 2.56
CCM2-218ENST00000541586 MYCNP04198 464 aaPredicted RBP31.05■■■□□ 2.56
CCM2-218ENST00000541586 SP4Q02446 784 aa31.05■■■□□ 2.56
CCM2-218ENST00000541586 MORC3Q14149 939 aa31.05■■■□□ 2.56
CCM2-218ENST00000541586 DHX37Q8IY37 1157 aaKnown RBP31.05■■■□□ 2.56
CCM2-218ENST00000541586 ERMNQ8TAM6 284 aa31.05■■■□□ 2.56
CCM2-218ENST00000541586 MLXIPQ9HAP2 919 aa31.05■■■□□ 2.56
CCM2-218ENST00000541586 GAS7O60861 476 aa31.04■■■□□ 2.56
CCM2-218ENST00000541586 KCNA2P16389 499 aa31.04■■■□□ 2.56
CCM2-218ENST00000541586 PPP2R5CQ13362 524 aa31.04■■■□□ 2.56
CCM2-218ENST00000541586 NEDD9Q14511 834 aa31.04■■■□□ 2.56
CCM2-218ENST00000541586 IQCB1Q15051 598 aa31.04■■■□□ 2.56
CCM2-218ENST00000541586 HAUS3Q68CZ6 603 aa31.04■■■□□ 2.56
CCM2-218ENST00000541586 SENP7Q9BQF6 1050 aa31.04■■■□□ 2.56
CCM2-218ENST00000541586 ITGB3BPQ13352 177 aaPredicted RBP31.04■■■□□ 2.56
CCM2-218ENST00000541586 DEFB118Q96PH6 123 aa31.04■■■□□ 2.56
CCM2-218ENST00000541586 NT5C3AQ9H0P0 336 aa31.04■■■□□ 2.56
CCM2-218ENST00000541586 GNEQ9Y223 722 aaKnown RBP31.04■■■□□ 2.56
CCM2-218ENST00000541586 STK24Q9Y6E0 443 aa31.04■■■□□ 2.56
CCM2-218ENST00000541586 MED24O75448 989 aa31.03■■■□□ 2.56
CCM2-218ENST00000541586 MYL1P05976 194 aa31.03■■■□□ 2.56
CCM2-218ENST00000541586 KCNK18Q7Z418 384 aa31.03■■■□□ 2.56
CCM2-218ENST00000541586 TLK2Q86UE8 772 aa31.03■■■□□ 2.56
CCM2-218ENST00000541586 OR6J1Q8NGC5 347 aa31.03■■■□□ 2.56
CCM2-218ENST00000541586 LARP4BQ92615 738 aaKnown RBP31.03■■■□□ 2.56
CCM2-218ENST00000541586 RIT2Q99578 217 aa31.03■■■□□ 2.56
CCM2-218ENST00000541586 POTEB3A0JP26 581 aa31.02■■■□□ 2.56
CCM2-218ENST00000541586 EML1O00423 815 aa31.02■■■□□ 2.56
CCM2-218ENST00000541586 NKRFO15226 690 aaKnown RBP eCLIP31.02■■■□□ 2.56
CCM2-218ENST00000541586 DUSP11O75319 330 aaKnown RBP31.02■■■□□ 2.56
CCM2-218ENST00000541586 GH1P01241 217 aa31.02■■■□□ 2.56
CCM2-218ENST00000541586 CELF3Q5SZQ8 465 aaKnown RBP31.02■■■□□ 2.56
CCM2-218ENST00000541586 POTEBQ6S5H4 581 aa31.02■■■□□ 2.56
CCM2-218ENST00000541586 RAD54LQ92698 747 aa31.02■■■□□ 2.56
CCM2-218ENST00000541586 TEKT3Q9BXF9 490 aa31.02■■■□□ 2.56
CCM2-218ENST00000541586 PGK1P00558 417 aa31.01■■■□□ 2.56
CCM2-218ENST00000541586 IRX5P78411 483 aaPredicted RBP31.01■■■□□ 2.56
CCM2-218ENST00000541586 CATSPER3Q86XQ3 398 aa31.01■■■□□ 2.56
CCM2-218ENST00000541586 BPIFA3Q9BQP9 254 aa31.01■■■□□ 2.56
CCM2-218ENST00000541586 AP5M1Q9H0R1 490 aa31.01■■■□□ 2.56
CCM2-218ENST00000541586 XPNPEP3Q9NQH7 507 aa31.01■■■□□ 2.56
CCM2-218ENST00000541586 KIAA1024Q9UPX6 916 aa31.01■■■□□ 2.56
CCM2-218ENST00000541586 MSCO60682 206 aa31.01■■■□□ 2.55
CCM2-218ENST00000541586 RPA1P27694 616 aa31.01■■■□□ 2.55
CCM2-218ENST00000541586 MCM6Q14566 821 aa31.01■■■□□ 2.55
CCM2-218ENST00000541586 LHX8Q68G74 356 aa31.01■■■□□ 2.55
CCM2-218ENST00000541586 B3GNT9Q6UX72 402 aa31.01■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms