RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 TBC1D8BQ0IIM8 1120 aa18.95■□□□□ 0.62
SPIDR-227ENST00000541342 TRAF1Q13077 416 aa18.95■□□□□ 0.62
SPIDR-227ENST00000541342 SEMA3FQ13275 785 aa18.95■□□□□ 0.62
SPIDR-227ENST00000541342 STIM1Q13586 685 aa18.95■□□□□ 0.62
SPIDR-227ENST00000541342 KRT26Q7Z3Y9 468 aa18.95■□□□□ 0.62
SPIDR-227ENST00000541342 C10orf67Q8IYJ2 551 aa18.95■□□□□ 0.62
SPIDR-227ENST00000541342 SLFN12Q8IYM2 578 aa18.95■□□□□ 0.62
SPIDR-227ENST00000541342 MAGEC2Q9UBF1 373 aaPredicted RBP18.95■□□□□ 0.62
SPIDR-227ENST00000541342 POLR2AP24928 1970 aaKnown RBP18.95■□□□□ 0.62
SPIDR-227ENST00000541342 WDR46O15213 610 aaKnown RBP18.95■□□□□ 0.62
SPIDR-227ENST00000541342 HIRAP54198 1017 aaPredicted RBP18.95■□□□□ 0.62
SPIDR-227ENST00000541342 CCDC170Q8IYT3 715 aa18.95■□□□□ 0.62
SPIDR-227ENST00000541342 SMCR8Q8TEV9 937 aaPredicted RBP18.95■□□□□ 0.62
SPIDR-227ENST00000541342 PARP14Q460N5 1801 aa18.95■□□□□ 0.62
SPIDR-227ENST00000541342 MACROD2A1Z1Q3 448 aa18.94■□□□□ 0.62
SPIDR-227ENST00000541342 VGLL3A8MV65 326 aa18.94■□□□□ 0.62
SPIDR-227ENST00000541342 GCOM1H8Y6P7 765 aaPredicted RBP18.94■□□□□ 0.62
SPIDR-227ENST00000541342 MSH4O15457 936 aa18.94■□□□□ 0.62
SPIDR-227ENST00000541342 POLR2MP0CAP2 368 aa18.94■□□□□ 0.62
SPIDR-227ENST00000541342 LMNB1P20700 586 aa18.94■□□□□ 0.62
SPIDR-227ENST00000541342 CCNE1P24864 410 aa18.94■□□□□ 0.62
SPIDR-227ENST00000541342 MTMR2Q13614 643 aa18.94■□□□□ 0.62
SPIDR-227ENST00000541342 TSR1Q2NL82 804 aaKnown RBP18.94■□□□□ 0.62
SPIDR-227ENST00000541342 EHBP1Q8NDI1 1231 aa18.94■□□□□ 0.62
SPIDR-227ENST00000541342 LPAR1Q92633 364 aa18.94■□□□□ 0.62
SPIDR-227ENST00000541342 ZKSCAN4Q969J2 545 aaPredicted RBP18.94■□□□□ 0.62
SPIDR-227ENST00000541342 MRPL11Q9Y3B7 192 aaKnown RBP18.94■□□□□ 0.62
SPIDR-227ENST00000541342 IGLV3-22A0A075B6J6 115 aa18.94■□□□□ 0.62
SPIDR-227ENST00000541342 EPHB6O15197 1021 aa18.94■□□□□ 0.62
SPIDR-227ENST00000541342 CYLC1P35663 651 aaPredicted RBP18.94■□□□□ 0.62
SPIDR-227ENST00000541342 EPS15P42566 896 aa18.94■□□□□ 0.62
SPIDR-227ENST00000541342 GPC2Q8N158 579 aa18.94■□□□□ 0.62
SPIDR-227ENST00000541342 RETREG2Q8NC44 543 aa18.94■□□□□ 0.62
SPIDR-227ENST00000541342 KIAA0895Q8NCT3 520 aa18.94■□□□□ 0.62
SPIDR-227ENST00000541342 NOC3LQ8WTT2 800 aaKnown RBP18.94■□□□□ 0.62
SPIDR-227ENST00000541342 EMILIN3Q9NT22 766 aa18.94■□□□□ 0.62
SPIDR-227ENST00000541342 GINM1Q9NU53 330 aa18.94■□□□□ 0.62
SPIDR-227ENST00000541342 ZNF112Q9UJU3 913 aa18.94■□□□□ 0.62
SPIDR-227ENST00000541342 PHIPQ8WWQ0 1821 aa18.94■□□□□ 0.62
SPIDR-227ENST00000541342 ANO9A1A5B4 782 aa18.94■□□□□ 0.62
SPIDR-227ENST00000541342 TBX3O15119 743 aa18.94■□□□□ 0.62
SPIDR-227ENST00000541342 IVLP07476 585 aa18.94■□□□□ 0.62
SPIDR-227ENST00000541342 TNNT3P45378 269 aaPredicted RBP18.94■□□□□ 0.62
SPIDR-227ENST00000541342 C2orf54Q08AI8 447 aa18.94■□□□□ 0.62
SPIDR-227ENST00000541342 DYMQ7RTS9 669 aa18.94■□□□□ 0.62
SPIDR-227ENST00000541342 RPGRIP1Q96KN7 1286 aa18.94■□□□□ 0.62
SPIDR-227ENST00000541342 POTEB3A0JP26 581 aa18.93■□□□□ 0.62
SPIDR-227ENST00000541342 POTECB2RU33 542 aa18.93■□□□□ 0.62
SPIDR-227ENST00000541342 POTEBQ6S5H4 581 aa18.93■□□□□ 0.62
SPIDR-227ENST00000541342 CCNI2Q6ZMN8 369 aaPredicted RBP18.93■□□□□ 0.62
SPIDR-227ENST00000541342 CREG2Q8IUH2 290 aa18.93■□□□□ 0.62
SPIDR-227ENST00000541342 APOBEC3FQ8IUX4 373 aaKnown RBP18.93■□□□□ 0.62
SPIDR-227ENST00000541342 ERGIC2Q96RQ1 377 aa18.93■□□□□ 0.62
SPIDR-227ENST00000541342 NUP58Q9BVL2 599 aa18.93■□□□□ 0.62
SPIDR-227ENST00000541342 FHDC1Q9C0D6 1143 aaPredicted RBP18.93■□□□□ 0.62
SPIDR-227ENST00000541342 GGA3Q9NZ52 723 aa18.93■□□□□ 0.62
SPIDR-227ENST00000541342 CAPN6Q9Y6Q1 641 aa18.93■□□□□ 0.62
SPIDR-227ENST00000541342 ABCB11O95342 1321 aa18.93■□□□□ 0.62
SPIDR-227ENST00000541342 MED24O75448 989 aa18.93■□□□□ 0.62
SPIDR-227ENST00000541342 ICAM1P05362 532 aa18.93■□□□□ 0.62
SPIDR-227ENST00000541342 IDEP14735 1019 aa18.93■□□□□ 0.62
SPIDR-227ENST00000541342 GGCXP38435 758 aa18.93■□□□□ 0.62
SPIDR-227ENST00000541342 CDK17Q00537 523 aa18.93■□□□□ 0.62
SPIDR-227ENST00000541342 PRPF38AQ8NAV1 312 aaKnown RBP18.93■□□□□ 0.62
SPIDR-227ENST00000541342 HINFPQ9BQA5 517 aa18.93■□□□□ 0.62
SPIDR-227ENST00000541342 WDR18Q9BV38 432 aa18.93■□□□□ 0.62
SPIDR-227ENST00000541342 SELENOOQ9BVL4 669 aa18.93■□□□□ 0.62
SPIDR-227ENST00000541342 RASSF4Q9H2L5 321 aa18.93■□□□□ 0.62
SPIDR-227ENST00000541342 SSC5DA1L4H1 1573 aa18.93■□□□□ 0.62
SPIDR-227ENST00000541342 VCAM1P19320 739 aa18.92■□□□□ 0.62
SPIDR-227ENST00000541342 UBXN2AP68543 259 aa18.92■□□□□ 0.62
SPIDR-227ENST00000541342 CKAP4Q07065 602 aaKnown RBP18.92■□□□□ 0.62
SPIDR-227ENST00000541342 ACBD3Q9H3P7 528 aa18.92■□□□□ 0.62
SPIDR-227ENST00000541342 SEMA6BQ9H3T3 888 aa18.92■□□□□ 0.62
SPIDR-227ENST00000541342 SPON1Q9HCB6 807 aa18.92■□□□□ 0.62
SPIDR-227ENST00000541342 KIAA1024Q9UPX6 916 aa18.92■□□□□ 0.62
SPIDR-227ENST00000541342 E9PMD0 336 aa18.92■□□□□ 0.62
SPIDR-227ENST00000541342 VAV2P52735 878 aa18.92■□□□□ 0.62
SPIDR-227ENST00000541342 FIGNQ5HY92 759 aa18.92■□□□□ 0.62
SPIDR-227ENST00000541342 DCAF15Q66K64 600 aa18.92■□□□□ 0.62
SPIDR-227ENST00000541342 TEX2Q8IWB9 1127 aa18.92■□□□□ 0.62
SPIDR-227ENST00000541342 HDAC7Q8WUI4 952 aa18.92■□□□□ 0.62
SPIDR-227ENST00000541342 DDX12PQ92771 950 aa18.92■□□□□ 0.62
SPIDR-227ENST00000541342 WRNIP1Q96S55 665 aa18.92■□□□□ 0.62
SPIDR-227ENST00000541342 PLEKHA4Q9H4M7 779 aa18.92■□□□□ 0.62
SPIDR-227ENST00000541342 ARHGAP20Q9P2F6 1191 aa18.92■□□□□ 0.62
SPIDR-227ENST00000541342 CCPG1Q9ULG6 757 aa18.92■□□□□ 0.62
SPIDR-227ENST00000541342 KDM3AQ9Y4C1 1321 aa18.92■□□□□ 0.62
SPIDR-227ENST00000541342 A0A1W2PQJ5 194 aa18.92■□□□□ 0.62
SPIDR-227ENST00000541342 CNNM4Q6P4Q7 775 aa18.92■□□□□ 0.62
SPIDR-227ENST00000541342 UNC13DQ70J99 1090 aa18.92■□□□□ 0.62
SPIDR-227ENST00000541342 SCYL3Q8IZE3 742 aa18.92■□□□□ 0.62
SPIDR-227ENST00000541342 NOC4LQ9BVI4 516 aaKnown RBP18.92■□□□□ 0.62
SPIDR-227ENST00000541342 VAV3Q9UKW4 847 aa18.92■□□□□ 0.62
SPIDR-227ENST00000541342 MAP9Q49MG5 647 aa18.91■□□□□ 0.62
SPIDR-227ENST00000541342 HOOK2Q96ED9 719 aa18.91■□□□□ 0.62
SPIDR-227ENST00000541342 FAM20AQ96MK3 541 aa18.91■□□□□ 0.62
SPIDR-227ENST00000541342 TANGO6Q9C0B7 1094 aa18.91■□□□□ 0.62
SPIDR-227ENST00000541342 NT5C3AQ9H0P0 336 aa18.91■□□□□ 0.62
SPIDR-227ENST00000541342 RBBP6Q7Z6E9 1792 aaKnown RBP18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms