RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 MYBP10242 640 aa11.35□□□□□ -0.59
CDC42SE1-207ENST00000540998 ABCB4P21439 1286 aa11.35□□□□□ -0.59
CDC42SE1-207ENST00000540998 TMEM119Q4V9L6 283 aa11.35□□□□□ -0.59
CDC42SE1-207ENST00000540998 SPAG5Q96R06 1193 aa11.35□□□□□ -0.59
CDC42SE1-207ENST00000540998 STK17AQ9UEE5 414 aa11.35□□□□□ -0.59
CDC42SE1-207ENST00000540998 NOC2LQ9Y3T9 749 aaKnown RBP11.35□□□□□ -0.59
CDC42SE1-207ENST00000540998 PCDHGC5Q9Y5F6 944 aa11.35□□□□□ -0.59
CDC42SE1-207ENST00000540998 IRS2Q9Y4H2 1338 aa11.35□□□□□ -0.59
CDC42SE1-207ENST00000540998 KIF4AO95239 1232 aa11.35□□□□□ -0.59
CDC42SE1-207ENST00000540998 BAG3O95817 575 aa11.35□□□□□ -0.59
CDC42SE1-207ENST00000540998 PLA2G4BP0C869 781 aa11.35□□□□□ -0.59
CDC42SE1-207ENST00000540998 FXR2P51116 673 aaKnown RBP eCLIP11.35□□□□□ -0.59
CDC42SE1-207ENST00000540998 ARSHQ5FYA8 562 aa11.35□□□□□ -0.59
CDC42SE1-207ENST00000540998 CCDC13Q8IYE1 715 aa11.35□□□□□ -0.59
CDC42SE1-207ENST00000540998 ADGRF4Q8IZF3 695 aa11.35□□□□□ -0.59
CDC42SE1-207ENST00000540998 NEDD1Q8NHV4 660 aa11.35□□□□□ -0.59
CDC42SE1-207ENST00000540998 TAF4BQ92750 862 aa11.35□□□□□ -0.59
CDC42SE1-207ENST00000540998 CYFIP2Q96F07 1278 aa11.35□□□□□ -0.59
CDC42SE1-207ENST00000540998 PCDHA12Q9UN75 941 aa11.35□□□□□ -0.59
CDC42SE1-207ENST00000540998 DDX60LQ5H9U9 1706 aaKnown RBP11.35□□□□□ -0.59
CDC42SE1-207ENST00000540998 LAMB2P55268 1798 aa11.34□□□□□ -0.59
CDC42SE1-207ENST00000540998 RBAK-RBAKDNI3L0D1 243 aa11.34□□□□□ -0.59
CDC42SE1-207ENST00000540998 C16orf86Q6ZW13 317 aa11.34□□□□□ -0.59
CDC42SE1-207ENST00000540998 IRF2BP2Q7Z5L9 587 aa11.34□□□□□ -0.59
CDC42SE1-207ENST00000540998 P2RX7Q99572 595 aaKnown RBP11.34□□□□□ -0.59
CDC42SE1-207ENST00000540998 TAF1DQ9H5J8 278 aaPredicted RBP11.34□□□□□ -0.59
CDC42SE1-207ENST00000540998 JMJD4Q9H9V9 463 aa11.34□□□□□ -0.59
CDC42SE1-207ENST00000540998 EMILIN3Q9NT22 766 aa11.34□□□□□ -0.59
CDC42SE1-207ENST00000540998 HDAC9Q9UKV0 1011 aa11.34□□□□□ -0.59
CDC42SE1-207ENST00000540998 IGSF9BQ9UPX0 1349 aa11.34□□□□□ -0.59
CDC42SE1-207ENST00000540998 DNM1LO00429 736 aa11.34□□□□□ -0.59
CDC42SE1-207ENST00000540998 KRIT1O00522 736 aa11.34□□□□□ -0.59
CDC42SE1-207ENST00000540998 MPHOSPH10O00566 681 aaKnown RBP11.34□□□□□ -0.59
CDC42SE1-207ENST00000540998 CNPY4Q8N129 248 aa11.34□□□□□ -0.59
CDC42SE1-207ENST00000540998 RNF10Q8N5U6 811 aaKnown RBP11.34□□□□□ -0.59
CDC42SE1-207ENST00000540998 PRPF38AQ8NAV1 312 aaKnown RBP11.34□□□□□ -0.59
CDC42SE1-207ENST00000540998 KCTD10Q9H3F6 313 aa11.34□□□□□ -0.59
CDC42SE1-207ENST00000540998 PCDHA2Q9Y5H9 948 aa11.34□□□□□ -0.59
CDC42SE1-207ENST00000540998 RREB1Q92766 1687 aa11.34□□□□□ -0.59
CDC42SE1-207ENST00000540998 H0YGN5 161 aa11.34□□□□□ -0.59
CDC42SE1-207ENST00000540998 GFPT2O94808 682 aa11.34□□□□□ -0.59
CDC42SE1-207ENST00000540998 SHBGP04278 402 aa11.34□□□□□ -0.59
CDC42SE1-207ENST00000540998 CYP11B2P19099 503 aa11.34□□□□□ -0.59
CDC42SE1-207ENST00000540998 HOXD13P35453 343 aa11.34□□□□□ -0.59
CDC42SE1-207ENST00000540998 MAGOHP61326 146 aaKnown RBP11.34□□□□□ -0.59
CDC42SE1-207ENST00000540998 DHX9Q08211 1270 aaKnown RBP11.34□□□□□ -0.59
CDC42SE1-207ENST00000540998 FAM98CQ17RN3 349 aaKnown RBP11.34□□□□□ -0.59
CDC42SE1-207ENST00000540998 MFSD14BQ5SR56 506 aa11.34□□□□□ -0.59
CDC42SE1-207ENST00000540998 ALKBH5Q6P6C2 394 aaKnown RBP11.34□□□□□ -0.59
CDC42SE1-207ENST00000540998 KIRREL3Q8IZU9 778 aa11.34□□□□□ -0.59
CDC42SE1-207ENST00000540998 U2AF1L4Q8WU68 220 aaKnown RBP11.34□□□□□ -0.59
CDC42SE1-207ENST00000540998 GLG1Q92896 1179 aa11.34□□□□□ -0.59
CDC42SE1-207ENST00000540998 MAGOHBQ96A72 148 aaKnown RBP11.34□□□□□ -0.59
CDC42SE1-207ENST00000540998 OSBPL7Q9BZF2 842 aa11.34□□□□□ -0.59
CDC42SE1-207ENST00000540998 ANKRD2Q9GZV1 360 aa11.34□□□□□ -0.59
CDC42SE1-207ENST00000540998 MTFR1LQ9H019 292 aa11.34□□□□□ -0.59
CDC42SE1-207ENST00000540998 TMBIM4Q9HC24 238 aa11.34□□□□□ -0.59
CDC42SE1-207ENST00000540998 HAUS2Q9NVX0 235 aa11.34□□□□□ -0.59
CDC42SE1-207ENST00000540998 DDX20Q9UHI6 824 aaKnown RBP11.34□□□□□ -0.59
CDC42SE1-207ENST00000540998 PCDHB13Q9Y5F0 798 aa11.34□□□□□ -0.59
CDC42SE1-207ENST00000540998 NFS1Q9Y697 457 aa11.34□□□□□ -0.59
CDC42SE1-207ENST00000540998 ZBTB39O15060 712 aa11.33□□□□□ -0.6
CDC42SE1-207ENST00000540998 LRRN2O75325 713 aa11.33□□□□□ -0.6
CDC42SE1-207ENST00000540998 AKAP3O75969 853 aa11.33□□□□□ -0.6
CDC42SE1-207ENST00000540998 UFL1O94874 794 aa11.33□□□□□ -0.6
CDC42SE1-207ENST00000540998 UCHL3P15374 230 aa11.33□□□□□ -0.6
CDC42SE1-207ENST00000540998 TNFRSF8P28908 595 aa11.33□□□□□ -0.6
CDC42SE1-207ENST00000540998 RHBDL3P58872 404 aa11.33□□□□□ -0.6
CDC42SE1-207ENST00000540998 GPSM2P81274 684 aa11.33□□□□□ -0.6
CDC42SE1-207ENST00000540998 SFR1Q86XK3 245 aa11.33□□□□□ -0.6
CDC42SE1-207ENST00000540998 PALB2Q86YC2 1186 aa11.33□□□□□ -0.6
CDC42SE1-207ENST00000540998 SUGP1Q8IWZ8 645 aaKnown RBP11.33□□□□□ -0.6
CDC42SE1-207ENST00000540998 DDX4Q9NQI0 724 aaKnown RBP11.33□□□□□ -0.6
CDC42SE1-207ENST00000540998 GGT7Q9UJ14 662 aa11.33□□□□□ -0.6
CDC42SE1-207ENST00000540998 NAGPAQ9UK23 515 aa11.33□□□□□ -0.6
CDC42SE1-207ENST00000540998 ATP8A1Q9Y2Q0 1164 aa11.33□□□□□ -0.6
CDC42SE1-207ENST00000540998 GCOM1H8Y6P7 765 aaPredicted RBP11.33□□□□□ -0.6
CDC42SE1-207ENST00000540998 FGFR1OPO95684 399 aaKnown RBP11.33□□□□□ -0.6
CDC42SE1-207ENST00000540998 MYZAPP0CAP1 466 aa11.33□□□□□ -0.6
CDC42SE1-207ENST00000540998 CACNB3P54284 484 aa11.33□□□□□ -0.6
CDC42SE1-207ENST00000540998 CLEC4GQ6UXB4 293 aa11.33□□□□□ -0.6
CDC42SE1-207ENST00000540998 DAAM2Q86T65 1068 aa11.33□□□□□ -0.6
CDC42SE1-207ENST00000540998 RIOX1Q9H6W3 641 aa11.33□□□□□ -0.6
CDC42SE1-207ENST00000540998 ROBO3Q96MS0 1386 aa11.33□□□□□ -0.6
CDC42SE1-207ENST00000540998 TLDC2A0PJX2 215 aa11.32□□□□□ -0.6
CDC42SE1-207ENST00000540998 FOXO6A8MYZ6 492 aa11.32□□□□□ -0.6
CDC42SE1-207ENST00000540998 RIMBP2O15034 1052 aa11.32□□□□□ -0.6
CDC42SE1-207ENST00000540998 HSPA9P38646 679 aaKnown RBP11.32□□□□□ -0.6
CDC42SE1-207ENST00000540998 SCNN1DP51172 638 aa11.32□□□□□ -0.6
CDC42SE1-207ENST00000540998 TNNC1P63316 161 aa11.32□□□□□ -0.6
CDC42SE1-207ENST00000540998 E2F5Q15329 346 aa11.32□□□□□ -0.6
CDC42SE1-207ENST00000540998 B4GALNT4Q76KP1 1039 aa11.32□□□□□ -0.6
CDC42SE1-207ENST00000540998 LRRC57Q8N9N7 239 aa11.32□□□□□ -0.6
CDC42SE1-207ENST00000540998 CYP2W1Q8TAV3 490 aa11.32□□□□□ -0.6
CDC42SE1-207ENST00000540998 WDR66Q8TBY9 1149 aa11.32□□□□□ -0.6
CDC42SE1-207ENST00000540998 GOPCQ9HD26 462 aa11.32□□□□□ -0.6
CDC42SE1-207ENST00000540998 ERVK-5Q9HDB9 667 aa11.32□□□□□ -0.6
CDC42SE1-207ENST00000540998 SEPT11Q9NVA2 429 aaKnown RBP11.32□□□□□ -0.6
CDC42SE1-207ENST00000540998 MTMR4Q9NYA4 1195 aa11.32□□□□□ -0.6
CDC42SE1-207ENST00000540998 NAV1Q8NEY1 1877 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms