RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 FBXL18Q96ME1 805 aa30.82■■■□□ 2.52
CHFR-218ENST00000540963 LZTS2Q9BRK4 669 aa30.82■■■□□ 2.52
CHFR-218ENST00000540963 FTHL17Q9BXU8 183 aa30.82■■■□□ 2.52
CHFR-218ENST00000540963 SMARCAD1Q9H4L7 1026 aa30.82■■■□□ 2.52
CHFR-218ENST00000540963 SEC63Q9UGP8 760 aaKnown RBP30.82■■■□□ 2.52
CHFR-218ENST00000540963 SUPT16HQ9Y5B9 1047 aaKnown RBP30.82■■■□□ 2.52
CHFR-218ENST00000540963 TRIOO75962 3097 aa30.82■■■□□ 2.52
CHFR-218ENST00000540963 FAM43BQ6ZT52 329 aaPredicted RBP30.81■■■□□ 2.52
CHFR-218ENST00000540963 CMTR2Q8IYT2 770 aaKnown RBP30.81■■■□□ 2.52
CHFR-218ENST00000540963 CTCFLQ8NI51 663 aaPredicted RBP30.81■■■□□ 2.52
CHFR-218ENST00000540963 CD207Q9UJ71 328 aa30.81■■■□□ 2.52
CHFR-218ENST00000540963 PLAGL2Q9UPG8 496 aa30.81■■■□□ 2.52
CHFR-218ENST00000540963 CDY2AQ9Y6F7 541 aa30.81■■■□□ 2.52
CHFR-218ENST00000540963 WDFY4Q6ZS81 3184 aa30.81■■■□□ 2.52
CHFR-218ENST00000540963 GSTTP1A0A1W2PQM5 241 aa30.8■■■□□ 2.52
CHFR-218ENST00000540963 MAFGO15525 162 aa30.8■■■□□ 2.52
CHFR-218ENST00000540963 DDAH1O94760 285 aa30.8■■■□□ 2.52
CHFR-218ENST00000540963 ADAM15Q13444 863 aa30.8■■■□□ 2.52
CHFR-218ENST00000540963 MARCH8Q5T0T0 291 aa30.8■■■□□ 2.52
CHFR-218ENST00000540963 CRIPAKQ8N1N5 446 aa30.8■■■□□ 2.52
CHFR-218ENST00000540963 DNAJB3Q8WWF6 145 aa30.8■■■□□ 2.52
CHFR-218ENST00000540963 MTA3Q9BTC8 594 aa30.8■■■□□ 2.52
CHFR-218ENST00000540963 RRN3P2A6NIE6 340 aa30.79■■■□□ 2.52
CHFR-218ENST00000540963 ATP9AO75110 1047 aa30.79■■■□□ 2.52
CHFR-218ENST00000540963 TBX10O75333 385 aa30.79■■■□□ 2.52
CHFR-218ENST00000540963 GNAQP50148 359 aa30.79■■■□□ 2.52
CHFR-218ENST00000540963 MRPS6P82932 125 aaKnown RBP30.79■■■□□ 2.52
CHFR-218ENST00000540963 IER5Q5VY09 327 aa30.79■■■□□ 2.52
CHFR-218ENST00000540963 HFE2Q6ZVN8 426 aa30.79■■■□□ 2.52
CHFR-218ENST00000540963 PIBF1Q8WXW3 757 aa30.79■■■□□ 2.52
CHFR-218ENST00000540963 GLG1Q92896 1179 aa30.79■■■□□ 2.52
CHFR-218ENST00000540963 TNPO1Q92973 898 aaKnown RBP30.79■■■□□ 2.52
CHFR-218ENST00000540963 KIAA1671Q9BY89 1806 aa30.78■■■□□ 2.52
CHFR-218ENST00000540963 EYA4O95677 639 aa30.78■■■□□ 2.52
CHFR-218ENST00000540963 PTH1RQ03431 593 aa30.78■■■□□ 2.52
CHFR-218ENST00000540963 CAMK1Q14012 370 aa30.78■■■□□ 2.52
CHFR-218ENST00000540963 ITGB5P18084 799 aa30.77■■■□□ 2.52
CHFR-218ENST00000540963 ANTXR2P58335 489 aa30.77■■■□□ 2.52
CHFR-218ENST00000540963 CLUL1Q15846 466 aa30.77■■■□□ 2.52
CHFR-218ENST00000540963 TTC22Q5TAA0 569 aa30.77■■■□□ 2.52
CHFR-218ENST00000540963 RNF135Q8IUD6 432 aa30.77■■■□□ 2.52
CHFR-218ENST00000540963 NPAS4Q8IUM7 802 aa30.77■■■□□ 2.52
CHFR-218ENST00000540963 ZNF654Q8IZM8 581 aa30.77■■■□□ 2.52
CHFR-218ENST00000540963 MSLNLQ96KJ4 702 aa30.77■■■□□ 2.52
CHFR-218ENST00000540963 PSTPIP2Q9H939 334 aa30.77■■■□□ 2.52
CHFR-218ENST00000540963 ALG13Q9NP73 1137 aaKnown RBP30.77■■■□□ 2.52
CHFR-218ENST00000540963 UBIAD1Q9Y5Z9 338 aa30.77■■■□□ 2.52
CHFR-218ENST00000540963 STXBP3O00186 592 aa30.76■■■□□ 2.51
CHFR-218ENST00000540963 MARK3P27448 753 aa30.76■■■□□ 2.51
CHFR-218ENST00000540963 MTMR1Q13613 665 aa30.76■■■□□ 2.51
CHFR-218ENST00000540963 BMP8AQ7Z5Y6 402 aa30.76■■■□□ 2.51
CHFR-218ENST00000540963 MB21D2Q8IYB1 491 aaPredicted RBP30.76■■■□□ 2.51
CHFR-218ENST00000540963 IGFLR1Q9H665 355 aa30.76■■■□□ 2.51
CHFR-218ENST00000540963 AGO3Q9H9G7 860 aaKnown RBP30.76■■■□□ 2.51
CHFR-218ENST00000540963 MUTYHQ9UIF7 546 aa30.76■■■□□ 2.51
CHFR-218ENST00000540963 LOXHD1Q8IVV2 1947 aa30.76■■■□□ 2.51
CHFR-218ENST00000540963 TECTAO75443 2155 aa30.75■■■□□ 2.51
CHFR-218ENST00000540963 STAG3L1P0CL83 205 aa30.75■■■□□ 2.51
CHFR-218ENST00000540963 GSPT1P15170 499 aaKnown RBP30.75■■■□□ 2.51
CHFR-218ENST00000540963 TMTC2Q8N394 836 aa30.75■■■□□ 2.51
CHFR-218ENST00000540963 LINC01599Q8WXQ3 324 aa30.75■■■□□ 2.51
CHFR-218ENST00000540963 EDAQ92838 391 aa30.75■■■□□ 2.51
CHFR-218ENST00000540963 LY9Q9HBG7 655 aa30.75■■■□□ 2.51
CHFR-218ENST00000540963 MRPL42Q9Y6G3 142 aaKnown RBP30.75■■■□□ 2.51
CHFR-218ENST00000540963 M0QZ92 97 aa30.74■■■□□ 2.51
CHFR-218ENST00000540963 CHMLP26374 656 aa30.74■■■□□ 2.51
CHFR-218ENST00000540963 CD52P31358 61 aa30.74■■■□□ 2.51
CHFR-218ENST00000540963 GTF2F1P35269 517 aaKnown RBP eCLIP30.74■■■□□ 2.51
CHFR-218ENST00000540963 NDUFV1P49821 464 aa30.74■■■□□ 2.51
CHFR-218ENST00000540963 EFHBQ8N7U6 833 aa30.74■■■□□ 2.51
CHFR-218ENST00000540963 SPPL3Q8TCT6 385 aa30.74■■■□□ 2.51
CHFR-218ENST00000540963 JADE2Q9NQC1 790 aa30.74■■■□□ 2.51
CHFR-218ENST00000540963 TAF6LQ9Y6J9 622 aa30.74■■■□□ 2.51
CHFR-218ENST00000540963 LINC01565O15544 149 aa30.73■■■□□ 2.51
CHFR-218ENST00000540963 ITGB1P05556 798 aa30.73■■■□□ 2.51
CHFR-218ENST00000540963 INSRRP14616 1297 aa30.73■■■□□ 2.51
CHFR-218ENST00000540963 COASYQ13057 564 aa30.73■■■□□ 2.51
CHFR-218ENST00000540963 PKN1Q16512 942 aa30.73■■■□□ 2.51
CHFR-218ENST00000540963 RTN4RL1Q86UN2 441 aaPredicted RBP30.73■■■□□ 2.51
CHFR-218ENST00000540963 TRPV2Q9Y5S1 764 aa30.73■■■□□ 2.51
CHFR-218ENST00000540963 IGSF9BQ9UPX0 1349 aa30.73■■■□□ 2.51
CHFR-218ENST00000540963 SMRP1Q8NCR6 262 aa30.72■■■□□ 2.51
CHFR-218ENST00000540963 PCDHA2Q9Y5H9 948 aa30.72■■■□□ 2.51
CHFR-218ENST00000540963 KDM3AQ9Y4C1 1321 aa30.72■■■□□ 2.51
CHFR-218ENST00000540963 SPDYE3A6NKU9 549 aa30.71■■■□□ 2.51
CHFR-218ENST00000540963 DNAJB1P25685 340 aa30.71■■■□□ 2.51
CHFR-218ENST00000540963 TEX2Q8IWB9 1127 aa30.71■■■□□ 2.51
CHFR-218ENST00000540963 NME8Q8N427 588 aa30.71■■■□□ 2.51
CHFR-218ENST00000540963 SRBD1Q8N5C6 995 aaKnown RBP30.71■■■□□ 2.51
CHFR-218ENST00000540963 MAP4K1Q92918 833 aa30.71■■■□□ 2.51
CHFR-218ENST00000540963 AZI2Q9H6S1 392 aa30.71■■■□□ 2.51
CHFR-218ENST00000540963 JPH1Q9HDC5 661 aaPredicted RBP30.71■■■□□ 2.51
CHFR-218ENST00000540963 PADI3Q9ULW8 664 aa30.71■■■□□ 2.51
CHFR-218ENST00000540963 SGSM2O43147 1006 aa30.7■■■□□ 2.51
CHFR-218ENST00000540963 CALM1P0DP23 149 aa30.7■■■□□ 2.51
CHFR-218ENST00000540963 CALM2P0DP24 149 aa30.7■■■□□ 2.51
CHFR-218ENST00000540963 CALM3P0DP25 149 aa30.7■■■□□ 2.51
CHFR-218ENST00000540963 IGBP1P78318 339 aa30.7■■■□□ 2.51
CHFR-218ENST00000540963 CASC1Q6TDU7 716 aa30.7■■■□□ 2.51
CHFR-218ENST00000540963 KLHL23Q8NBE8 558 aa30.7■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms