RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 IMPACTQ9P2X3 320 aa13.64□□□□□ -0.23
AP003559.1-201ENST00000540906 WDR81Q562E7 1941 aa13.64□□□□□ -0.23
AP003559.1-201ENST00000540906 LRRC10BA6NIK2 292 aa13.64□□□□□ -0.23
AP003559.1-201ENST00000540906 SFI1A8K8P3 1242 aa13.64□□□□□ -0.23
AP003559.1-201ENST00000540906 KRT18P05783 430 aaKnown RBP13.64□□□□□ -0.23
AP003559.1-201ENST00000540906 CYP2C8P10632 490 aa13.64□□□□□ -0.23
AP003559.1-201ENST00000540906 KCNA2P16389 499 aa13.64□□□□□ -0.23
AP003559.1-201ENST00000540906 ERCC3P19447 782 aa13.64□□□□□ -0.23
AP003559.1-201ENST00000540906 HOXD13P35453 343 aa13.64□□□□□ -0.23
AP003559.1-201ENST00000540906 NELFCDQ8IXH7 590 aa13.64□□□□□ -0.23
AP003559.1-201ENST00000540906 CCDC65Q8IXS2 484 aa13.64□□□□□ -0.23
AP003559.1-201ENST00000540906 ZNF784Q8NCA9 323 aaPredicted RBP13.64□□□□□ -0.23
AP003559.1-201ENST00000540906 SCFD1Q8WVM8 642 aa13.64□□□□□ -0.23
AP003559.1-201ENST00000540906 SLC10A4Q96EP9 437 aa13.64□□□□□ -0.23
AP003559.1-201ENST00000540906 FGD4Q96M96 766 aa13.64□□□□□ -0.23
AP003559.1-201ENST00000540906 SH2D3AQ9BRG2 576 aa13.64□□□□□ -0.23
AP003559.1-201ENST00000540906 STK24Q9Y6E0 443 aa13.64□□□□□ -0.23
AP003559.1-201ENST00000540906 SP2Q02086 613 aa13.63□□□□□ -0.23
AP003559.1-201ENST00000540906 PSMD2Q13200 908 aa13.63□□□□□ -0.23
AP003559.1-201ENST00000540906 ZCWPW2Q504Y3 356 aa13.63□□□□□ -0.23
AP003559.1-201ENST00000540906 LRRC55Q6ZSA7 311 aa13.63□□□□□ -0.23
AP003559.1-201ENST00000540906 ANKRD35Q8N283 1001 aa13.63□□□□□ -0.23
AP003559.1-201ENST00000540906 CSGALNACT2Q8N6G5 542 aa13.63□□□□□ -0.23
AP003559.1-201ENST00000540906 MB21D1Q8N884 522 aa13.63□□□□□ -0.23
AP003559.1-201ENST00000540906 IKZF4Q9H2S9 585 aa13.63□□□□□ -0.23
AP003559.1-201ENST00000540906 THAP9Q9H5L6 903 aa13.63□□□□□ -0.23
AP003559.1-201ENST00000540906 BMP2KQ9NSY1 1161 aaPredicted RBP13.63□□□□□ -0.23
AP003559.1-201ENST00000540906 PGK2P07205 417 aa13.62□□□□□ -0.23
AP003559.1-201ENST00000540906 MYBP10242 640 aa13.62□□□□□ -0.23
AP003559.1-201ENST00000540906 XRRA1Q6P2D8 792 aa13.62□□□□□ -0.23
AP003559.1-201ENST00000540906 MYOCDQ8IZQ8 938 aa13.62□□□□□ -0.23
AP003559.1-201ENST00000540906 GPRASP2Q96D09 838 aa13.62□□□□□ -0.23
AP003559.1-201ENST00000540906 MS4A4AQ96JQ5 239 aa13.62□□□□□ -0.23
AP003559.1-201ENST00000540906 TBC1D22BQ9NU19 505 aa13.62□□□□□ -0.23
AP003559.1-201ENST00000540906 RNF225M0QZC1 329 aaPredicted RBP13.62□□□□□ -0.23
AP003559.1-201ENST00000540906 ALDH5A1P51649 535 aaPredicted RBP13.62□□□□□ -0.23
AP003559.1-201ENST00000540906 SNAPC2Q13487 334 aa13.62□□□□□ -0.23
AP003559.1-201ENST00000540906 FAM133AQ8N9E0 248 aa13.62□□□□□ -0.23
AP003559.1-201ENST00000540906 CNOT6LQ96LI5 555 aaKnown RBP13.62□□□□□ -0.23
AP003559.1-201ENST00000540906 KCTD10Q9H3F6 313 aa13.62□□□□□ -0.23
AP003559.1-201ENST00000540906 SAMM50Q9Y512 469 aa13.62□□□□□ -0.23
AP003559.1-201ENST00000540906 BICDL2A1A5D9 508 aa13.61□□□□□ -0.23
AP003559.1-201ENST00000540906 SPATA31C2B4DYI2 1134 aa13.61□□□□□ -0.23
AP003559.1-201ENST00000540906 N4BP3O15049 544 aa13.61□□□□□ -0.23
AP003559.1-201ENST00000540906 CELF2O95319 508 aaKnown RBP13.61□□□□□ -0.23
AP003559.1-201ENST00000540906 P4HBP07237 508 aaKnown RBP13.61□□□□□ -0.23
AP003559.1-201ENST00000540906 SKILP12757 684 aa13.61□□□□□ -0.23
AP003559.1-201ENST00000540906 ADKP55263 362 aaKnown RBP13.61□□□□□ -0.23
AP003559.1-201ENST00000540906 GSDMDP57764 484 aa13.61□□□□□ -0.23
AP003559.1-201ENST00000540906 SP4Q02446 784 aa13.61□□□□□ -0.23
AP003559.1-201ENST00000540906 KCNA1Q09470 495 aa13.61□□□□□ -0.23
AP003559.1-201ENST00000540906 MAPK7Q13164 816 aa13.61□□□□□ -0.23
AP003559.1-201ENST00000540906 SPECC1LQ69YQ0 1117 aa13.61□□□□□ -0.23
AP003559.1-201ENST00000540906 EPM2AIP1Q7L775 607 aaPredicted RBP13.61□□□□□ -0.23
AP003559.1-201ENST00000540906 FASTKD5Q7L8L6 764 aaKnown RBP13.61□□□□□ -0.23
AP003559.1-201ENST00000540906 TRMT1LQ7Z2T5 733 aaKnown RBP13.61□□□□□ -0.23
AP003559.1-201ENST00000540906 NLRX1Q86UT6 975 aa13.61□□□□□ -0.23
AP003559.1-201ENST00000540906 TMEM139Q8IV31 216 aa13.61□□□□□ -0.23
AP003559.1-201ENST00000540906 DAW1Q8N136 415 aa13.61□□□□□ -0.23
AP003559.1-201ENST00000540906 TC2NQ8N9U0 490 aa13.61□□□□□ -0.23
AP003559.1-201ENST00000540906 BRI3BPQ8WY22 251 aa13.61□□□□□ -0.23
AP003559.1-201ENST00000540906 NACC1Q96RE7 527 aa13.61□□□□□ -0.23
AP003559.1-201ENST00000540906 FIZ1Q96SL8 496 aa13.61□□□□□ -0.23
AP003559.1-201ENST00000540906 PORCNQ9H237 461 aa13.61□□□□□ -0.23
AP003559.1-201ENST00000540906 GBA2Q9HCG7 927 aaPredicted RBP13.61□□□□□ -0.23
AP003559.1-201ENST00000540906 USP27XA6NNY8 438 aa13.6□□□□□ -0.23
AP003559.1-201ENST00000540906 BTBD19C9JJ37 291 aa13.6□□□□□ -0.23
AP003559.1-201ENST00000540906 POTEB2H3BUK9 544 aa13.6□□□□□ -0.23
AP003559.1-201ENST00000540906 KIF3CO14782 793 aa13.6□□□□□ -0.23
AP003559.1-201ENST00000540906 PRPF6O94906 941 aaKnown RBP13.6□□□□□ -0.23
AP003559.1-201ENST00000540906 MUTP22033 750 aa13.6□□□□□ -0.23
AP003559.1-201ENST00000540906 NMT1P30419 496 aaKnown RBP13.6□□□□□ -0.23
AP003559.1-201ENST00000540906 NOLC1Q14978 699 aaKnown RBP eCLIP13.6□□□□□ -0.23
AP003559.1-201ENST00000540906 MIIPQ5JXC2 388 aa13.6□□□□□ -0.23
AP003559.1-201ENST00000540906 CST9Q5W186 159 aa13.6□□□□□ -0.23
AP003559.1-201ENST00000540906 PLA2G4FQ68DD2 849 aa13.6□□□□□ -0.23
AP003559.1-201ENST00000540906 KSR1Q8IVT5 923 aa13.6□□□□□ -0.23
AP003559.1-201ENST00000540906 ZNF507Q8TCN5 953 aa13.6□□□□□ -0.23
AP003559.1-201ENST00000540906 SPTLC3Q9NUV7 552 aa13.6□□□□□ -0.23
AP003559.1-201ENST00000540906 B4DLN1 442 aa13.6□□□□□ -0.23
AP003559.1-201ENST00000540906 BACH1O14867 736 aa13.6□□□□□ -0.23
AP003559.1-201ENST00000540906 ZNF862O60290 1169 aa13.6□□□□□ -0.23
AP003559.1-201ENST00000540906 STBD1O95210 358 aa13.6□□□□□ -0.23
AP003559.1-201ENST00000540906 OSBPP22059 807 aa13.6□□□□□ -0.23
AP003559.1-201ENST00000540906 EDNRBP24530 442 aa13.6□□□□□ -0.23
AP003559.1-201ENST00000540906 EEF1GP26641 437 aaKnown RBP13.6□□□□□ -0.23
AP003559.1-201ENST00000540906 PPP1R2P41236 205 aa13.6□□□□□ -0.23
AP003559.1-201ENST00000540906 QARSP47897 775 aaKnown RBP13.6□□□□□ -0.23
AP003559.1-201ENST00000540906 KLK7P49862 253 aa13.6□□□□□ -0.23
AP003559.1-201ENST00000540906 SPAG1Q07617 926 aa13.6□□□□□ -0.23
AP003559.1-201ENST00000540906 UTP14CQ5TAP6 766 aaKnown RBP13.6□□□□□ -0.23
AP003559.1-201ENST00000540906 MAEAQ7L5Y9 396 aa13.6□□□□□ -0.23
AP003559.1-201ENST00000540906 CCDC150Q8NCX0 1101 aa13.6□□□□□ -0.23
AP003559.1-201ENST00000540906 NEK9Q8TD19 979 aa13.6□□□□□ -0.23
AP003559.1-201ENST00000540906 CTAGE1Q96RT6 745 aa13.6□□□□□ -0.23
AP003559.1-201ENST00000540906 GTPBP4Q9BZE4 634 aaKnown RBP13.6□□□□□ -0.23
AP003559.1-201ENST00000540906 ZSWIM4Q9H7M6 989 aa13.6□□□□□ -0.23
AP003559.1-201ENST00000540906 EFCC1Q9HA90 598 aa13.6□□□□□ -0.23
AP003559.1-201ENST00000540906 FBXO40Q9UH90 709 aa13.6□□□□□ -0.23
AP003559.1-201ENST00000540906 LOXHD1Q8IVV2 1947 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms