RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 MARK3P27448 753 aa17.44■□□□□ 0.38
DDB1-218ENST00000540784 TLE2Q04725 743 aa17.44■□□□□ 0.38
DDB1-218ENST00000540784 EPHA7Q15375 998 aa17.44■□□□□ 0.38
DDB1-218ENST00000540784 SF3A1Q15459 793 aaKnown RBP17.44■□□□□ 0.38
DDB1-218ENST00000540784 TMEM266Q2M3C6 531 aa17.44■□□□□ 0.38
DDB1-218ENST00000540784 TRIM60Q495X7 471 aa17.44■□□□□ 0.38
DDB1-218ENST00000540784 DTHD1Q6ZMT9 781 aa17.44■□□□□ 0.38
DDB1-218ENST00000540784 ANKRD33Q7Z3H0 272 aa17.44■□□□□ 0.38
DDB1-218ENST00000540784 CKAP2LQ8IYA6 745 aa17.44■□□□□ 0.38
DDB1-218ENST00000540784 AFAP1L1Q8TED9 768 aa17.44■□□□□ 0.38
DDB1-218ENST00000540784 PPP1R13LQ8WUF5 828 aa17.44■□□□□ 0.38
DDB1-218ENST00000540784 ZNF396Q96N95 335 aaPredicted RBP17.44■□□□□ 0.38
DDB1-218ENST00000540784 TOX2Q96NM4 488 aa17.44■□□□□ 0.38
DDB1-218ENST00000540784 TSHZ2Q9NRE2 1034 aa17.44■□□□□ 0.38
DDB1-218ENST00000540784 HDAC6Q9UBN7 1215 aa17.44■□□□□ 0.38
DDB1-218ENST00000540784 MAFBQ9Y5Q3 323 aaPredicted RBP17.44■□□□□ 0.38
DDB1-218ENST00000540784 MROH7Q68CQ1 1323 aa17.44■□□□□ 0.38
DDB1-218ENST00000540784 TLR3O15455 904 aaKnown RBP17.43■□□□□ 0.38
DDB1-218ENST00000540784 PRPHP41219 470 aa17.43■□□□□ 0.38
DDB1-218ENST00000540784 MLLT1Q03111 559 aaPredicted RBP17.43■□□□□ 0.38
DDB1-218ENST00000540784 PDIA5Q14554 519 aa17.43■□□□□ 0.38
DDB1-218ENST00000540784 SESTD1Q86VW0 696 aa17.43■□□□□ 0.38
DDB1-218ENST00000540784 CCDC60Q8IWA6 550 aaPredicted RBP17.43■□□□□ 0.38
DDB1-218ENST00000540784 CLIC4Q9Y696 253 aa17.43■□□□□ 0.38
DDB1-218ENST00000540784 POTEB3A0JP26 581 aa17.42■□□□□ 0.38
DDB1-218ENST00000540784 BRD1O95696 1058 aa17.42■□□□□ 0.38
DDB1-218ENST00000540784 P4HBP07237 508 aaKnown RBP17.42■□□□□ 0.38
DDB1-218ENST00000540784 SMIM10L2AP0DMW4 78 aa17.42■□□□□ 0.38
DDB1-218ENST00000540784 SMIM10L2BP0DMW5 78 aa17.42■□□□□ 0.38
DDB1-218ENST00000540784 GNAT1P11488 350 aa17.42■□□□□ 0.38
DDB1-218ENST00000540784 FXR2P51116 673 aaKnown RBP eCLIP17.42■□□□□ 0.382e-7■■■■□ 25.9
DDB1-218ENST00000540784 ATP2C1P98194 919 aaPredicted RBP17.42■□□□□ 0.38
DDB1-218ENST00000540784 CEBPZQ03701 1054 aaKnown RBP17.42■□□□□ 0.38
DDB1-218ENST00000540784 SPIRE1Q08AE8 756 aa17.42■□□□□ 0.38
DDB1-218ENST00000540784 POTEBQ6S5H4 581 aa17.42■□□□□ 0.38
DDB1-218ENST00000540784 ATP6V0A1Q93050 837 aa17.42■□□□□ 0.38
DDB1-218ENST00000540784 RAB34Q9BZG1 259 aa17.42■□□□□ 0.38
DDB1-218ENST00000540784 TRPV6Q9H1D0 765 aa17.42■□□□□ 0.38
DDB1-218ENST00000540784 NRBP2Q9NSY0 501 aa17.42■□□□□ 0.38
DDB1-218ENST00000540784 TFIP11Q9UBB9 837 aaKnown RBP17.42■□□□□ 0.38
DDB1-218ENST00000540784 TRPC6Q9Y210 931 aa17.42■□□□□ 0.38
DDB1-218ENST00000540784 DOCK5Q9H7D0 1870 aa17.41■□□□□ 0.38
DDB1-218ENST00000540784 DKC1O60832 514 aaKnown RBP eCLIP17.41■□□□□ 0.38
DDB1-218ENST00000540784 ATP4AP20648 1035 aa17.41■□□□□ 0.38
DDB1-218ENST00000540784 QARSP47897 775 aaKnown RBP17.41■□□□□ 0.38
DDB1-218ENST00000540784 PSMC5P62195 406 aa17.41■□□□□ 0.38
DDB1-218ENST00000540784 NUCB2P80303 420 aa17.41■□□□□ 0.38
DDB1-218ENST00000540784 PLCB4Q15147 1175 aa17.41■□□□□ 0.38
DDB1-218ENST00000540784 FOXD4L6Q3SYB3 417 aaPredicted RBP17.41■□□□□ 0.38
DDB1-218ENST00000540784 ARL6IP4Q66PJ3 421 aaKnown RBP17.41■□□□□ 0.38
DDB1-218ENST00000540784 FOXD4L3Q6VB84 417 aaPredicted RBP17.41■□□□□ 0.38
DDB1-218ENST00000540784 TRMT1LQ7Z2T5 733 aaKnown RBP17.41■□□□□ 0.38
DDB1-218ENST00000540784 FAM126BQ8IXS8 530 aa17.41■□□□□ 0.38
DDB1-218ENST00000540784 EIF2AK1Q9BQI3 630 aaKnown RBP17.41■□□□□ 0.38
DDB1-218ENST00000540784 SETD4Q9NVD3 440 aa17.41■□□□□ 0.38
DDB1-218ENST00000540784 GTF2IRD1Q9UHL9 959 aa17.41■□□□□ 0.38
DDB1-218ENST00000540784 ZDHHC9Q9Y397 364 aa17.41■□□□□ 0.38
DDB1-218ENST00000540784 NR2E3Q9Y5X4 410 aa17.41■□□□□ 0.38
DDB1-218ENST00000540784 C17orf102A2RUQ5 167 aa17.4■□□□□ 0.38
DDB1-218ENST00000540784 RRN3P2A6NIE6 340 aa17.4■□□□□ 0.38
DDB1-218ENST00000540784 HBP1O60381 514 aa17.4■□□□□ 0.38
DDB1-218ENST00000540784 SLITRK3O94933 977 aa17.4■□□□□ 0.38
DDB1-218ENST00000540784 CD4P01730 458 aa17.4■□□□□ 0.38
DDB1-218ENST00000540784 INSRRP14616 1297 aa17.4■□□□□ 0.38
DDB1-218ENST00000540784 FAAP100Q0VG06 881 aa17.4■□□□□ 0.38
DDB1-218ENST00000540784 PPFIA1Q13136 1202 aa17.4■□□□□ 0.38
DDB1-218ENST00000540784 IL17AQ16552 155 aa17.4■□□□□ 0.38
DDB1-218ENST00000540784 PTGISQ16647 500 aa17.4■□□□□ 0.38
DDB1-218ENST00000540784 GDF6Q6KF10 455 aaPredicted RBP17.4■□□□□ 0.38
DDB1-218ENST00000540784 TPH2Q8IWU9 490 aa17.4■□□□□ 0.38
DDB1-218ENST00000540784 C7orf61Q8IZ16 206 aa17.4■□□□□ 0.38
DDB1-218ENST00000540784 BANK1Q8NDB2 785 aa17.4■□□□□ 0.38
DDB1-218ENST00000540784 ERMNQ8TAM6 284 aa17.4■□□□□ 0.38
DDB1-218ENST00000540784 ATP8B4Q8TF62 1192 aa17.4■□□□□ 0.38
DDB1-218ENST00000540784 BBXQ8WY36 941 aaPredicted RBP17.4■□□□□ 0.38
DDB1-218ENST00000540784 DYDC2Q96IM9 177 aa17.4■□□□□ 0.38
DDB1-218ENST00000540784 FAM167AQ96KS9 214 aa17.4■□□□□ 0.38
DDB1-218ENST00000540784 USP28Q96RU2 1077 aa17.4■□□□□ 0.38
DDB1-218ENST00000540784 TRMT13Q9NUP7 481 aaKnown RBP17.4■□□□□ 0.38
DDB1-218ENST00000540784 TMEM39AQ9NV64 488 aa17.4■□□□□ 0.38
DDB1-218ENST00000540784 RGL1Q9NZL6 768 aa17.4■□□□□ 0.38
DDB1-218ENST00000540784 LRWD1Q9UFC0 647 aa17.4■□□□□ 0.38
DDB1-218ENST00000540784 NOD1Q9Y239 953 aa17.4■□□□□ 0.38
DDB1-218ENST00000540784 STK24Q9Y6E0 443 aa17.4■□□□□ 0.38
DDB1-218ENST00000540784 NRCAMQ92823 1304 aa17.4■□□□□ 0.38
DDB1-218ENST00000540784 POTEMA6NI47 508 aa17.39■□□□□ 0.37
DDB1-218ENST00000540784 DDX11L8A8MPP1 907 aa17.39■□□□□ 0.37
DDB1-218ENST00000540784 B4GALT4O60513 344 aa17.39■□□□□ 0.37
DDB1-218ENST00000540784 CLTBP09497 229 aa17.39■□□□□ 0.37
DDB1-218ENST00000540784 UGCGQ16739 394 aa17.39■□□□□ 0.37
DDB1-218ENST00000540784 ATL3Q6DD88 541 aa17.39■□□□□ 0.37
DDB1-218ENST00000540784 NEK9Q8TD19 979 aa17.39■□□□□ 0.37
DDB1-218ENST00000540784 HSD17B14Q9BPX1 270 aa17.39■□□□□ 0.37
DDB1-218ENST00000540784 FTOQ9C0B1 505 aaKnown RBP eCLIP17.39■□□□□ 0.37
DDB1-218ENST00000540784 ZSWIM4Q9H7M6 989 aa17.39■□□□□ 0.37
DDB1-218ENST00000540784 PRKAG2Q9UGJ0 569 aa17.39■□□□□ 0.37
DDB1-218ENST00000540784 CFAP45Q9UL16 551 aa17.39■□□□□ 0.37
DDB1-218ENST00000540784 ATP6V1DQ9Y5K8 247 aa17.39■□□□□ 0.37
DDB1-218ENST00000540784 VWA3AA6NCI4 1184 aa17.38■□□□□ 0.37
DDB1-218ENST00000540784 ZNF862O60290 1169 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms