RNA–Protein interactions for RNA: ENST00000540581.5

CACFD1-206, Transcript of calcium channel flower domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CACFD1, Length 2,880 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-206ENST00000540581 PSMD2Q13200 908 aa17.44■□□□□ 0.38
CACFD1-206ENST00000540581 USH1GQ495M9 461 aa17.44■□□□□ 0.38
CACFD1-206ENST00000540581 COBLL1Q53SF7 1204 aa17.44■□□□□ 0.38
CACFD1-206ENST00000540581 SAMD1Q6SPF0 538 aaPredicted RBP17.44■□□□□ 0.38
CACFD1-206ENST00000540581 AMACRQ9UHK6 382 aa17.44■□□□□ 0.38
CACFD1-206ENST00000540581 CASP4P49662 377 aa17.44■□□□□ 0.38
CACFD1-206ENST00000540581 TNNC1P63316 161 aa17.44■□□□□ 0.38
CACFD1-206ENST00000540581 CDC37Q16543 378 aaPredicted RBP17.44■□□□□ 0.38
CACFD1-206ENST00000540581 KSR1Q8IVT5 923 aa17.44■□□□□ 0.38
CACFD1-206ENST00000540581 IPO4Q8TEX9 1081 aaKnown RBP17.44■□□□□ 0.38
CACFD1-206ENST00000540581 SEPT11Q9NVA2 429 aaKnown RBP17.44■□□□□ 0.38
CACFD1-206ENST00000540581 TSKSQ9UJT2 592 aa17.44■□□□□ 0.38
CACFD1-206ENST00000540581 SPATA31A5Q5VU36 1347 aa17.44■□□□□ 0.38
CACFD1-206ENST00000540581 SPATA31A7Q8IWB4 1347 aa17.44■□□□□ 0.38
CACFD1-206ENST00000540581 PNMA6FA0A0J9YX94 578 aa17.43■□□□□ 0.38
CACFD1-206ENST00000540581 ABCB4P21439 1286 aa17.43■□□□□ 0.38
CACFD1-206ENST00000540581 TCP10Q12799 353 aa17.43■□□□□ 0.38
CACFD1-206ENST00000540581 IFT88Q13099 833 aa17.43■□□□□ 0.38
CACFD1-206ENST00000540581 SFR1Q86XK3 245 aa17.43■□□□□ 0.38
CACFD1-206ENST00000540581 PROM2Q8N271 834 aa17.43■□□□□ 0.38
CACFD1-206ENST00000540581 GGA1Q9UJY5 639 aa17.43■□□□□ 0.38
CACFD1-206ENST00000540581 DAGLAQ9Y4D2 1042 aa17.43■□□□□ 0.38
CACFD1-206ENST00000540581 ESYT2A0FGR8 921 aa17.43■□□□□ 0.38
CACFD1-206ENST00000540581 GOLGA6L10A6NI86 522 aa17.43■□□□□ 0.38
CACFD1-206ENST00000540581 MRPL12P52815 198 aaKnown RBP17.43■□□□□ 0.38
CACFD1-206ENST00000540581 IKQ13123 557 aaPredicted RBP17.43■□□□□ 0.38
CACFD1-206ENST00000540581 ALKBH5Q6P6C2 394 aaKnown RBP17.43■□□□□ 0.38
CACFD1-206ENST00000540581 U2AF1L4Q8WU68 220 aaKnown RBP17.43■□□□□ 0.38
CACFD1-206ENST00000540581 LRRC27Q9C0I9 530 aa17.43■□□□□ 0.38
CACFD1-206ENST00000540581 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.43■□□□□ 0.38
CACFD1-206ENST00000540581 SRCAPQ6ZRS2 3230 aa17.43■□□□□ 0.38
CACFD1-206ENST00000540581 DAPK3O43293 454 aa17.42■□□□□ 0.38
CACFD1-206ENST00000540581 CTNNA1P35221 906 aaKnown RBP17.42■□□□□ 0.38
CACFD1-206ENST00000540581 ZNF543Q08ER8 600 aa17.42■□□□□ 0.38
CACFD1-206ENST00000540581 GLE1Q53GS7 698 aaKnown RBP17.42■□□□□ 0.38
CACFD1-206ENST00000540581 ASPRV1Q53RT3 343 aa17.42■□□□□ 0.38
CACFD1-206ENST00000540581 ARSHQ5FYA8 562 aa17.42■□□□□ 0.38
CACFD1-206ENST00000540581 DHX37Q8IY37 1157 aaKnown RBP17.42■□□□□ 0.38
CACFD1-206ENST00000540581 GANQ9H2C0 597 aa17.42■□□□□ 0.38
CACFD1-206ENST00000540581 LRRC4CQ9HCJ2 640 aa17.42■□□□□ 0.38
CACFD1-206ENST00000540581 POLLQ9UGP5 575 aa17.42■□□□□ 0.38
CACFD1-206ENST00000540581 COL14A1Q05707 1796 aaKnown RBP17.42■□□□□ 0.38
CACFD1-206ENST00000540581 RBAK-RBAKDNI3L0D1 243 aa17.42■□□□□ 0.38
CACFD1-206ENST00000540581 KRIT1O00522 736 aa17.42■□□□□ 0.38
CACFD1-206ENST00000540581 GFPT2O94808 682 aa17.42■□□□□ 0.38
CACFD1-206ENST00000540581 KIF4AO95239 1232 aa17.42■□□□□ 0.38
CACFD1-206ENST00000540581 EPB41P11171 864 aaKnown RBP17.42■□□□□ 0.38
CACFD1-206ENST00000540581 UCHL3P15374 230 aa17.42■□□□□ 0.38
CACFD1-206ENST00000540581 HSD17B3P37058 310 aa17.42■□□□□ 0.38
CACFD1-206ENST00000540581 METTL13Q8N6R0 699 aa17.42■□□□□ 0.38
CACFD1-206ENST00000540581 RBM46Q8TBY0 533 aaKnown RBP17.42■□□□□ 0.38
CACFD1-206ENST00000540581 ATP6V1G3Q96LB4 118 aa17.42■□□□□ 0.38
CACFD1-206ENST00000540581 KCTD10Q9H3F6 313 aa17.42■□□□□ 0.38
CACFD1-206ENST00000540581 ARMCX3Q9UH62 379 aaPredicted RBP17.42■□□□□ 0.38
CACFD1-206ENST00000540581 PCDHGC5Q9Y5F6 944 aa17.42■□□□□ 0.38
CACFD1-206ENST00000540581 PCDHA1Q9Y5I3 950 aa17.42■□□□□ 0.38
CACFD1-206ENST00000540581 SMIM23A6NLE4 172 aa17.42■□□□□ 0.38
CACFD1-206ENST00000540581 SART1O43290 800 aaKnown RBP17.42■□□□□ 0.38
CACFD1-206ENST00000540581 HNRNPH1P31943 449 aaKnown RBP17.42■□□□□ 0.38
CACFD1-206ENST00000540581 EXOC3L4Q17RC7 722 aa17.42■□□□□ 0.38
CACFD1-206ENST00000540581 PEX26Q7Z412 305 aa17.42■□□□□ 0.38
CACFD1-206ENST00000540581 DAAM2Q86T65 1068 aa17.42■□□□□ 0.38
CACFD1-206ENST00000540581 ZNF473Q8WTR7 871 aaKnown RBP17.42■□□□□ 0.38
CACFD1-206ENST00000540581 THRAP3Q9Y2W1 955 aaKnown RBP17.42■□□□□ 0.38
CACFD1-206ENST00000540581 LAMB2P55268 1798 aa17.41■□□□□ 0.38
CACFD1-206ENST00000540581 TTLL1O95922 423 aa17.41■□□□□ 0.38
CACFD1-206ENST00000540581 SKOR1P84550 965 aa17.41■□□□□ 0.38
CACFD1-206ENST00000540581 GPATCH11Q8N954 259 aa17.41■□□□□ 0.38
CACFD1-206ENST00000540581 C8orf37Q96NL8 207 aa17.41■□□□□ 0.38
CACFD1-206ENST00000540581 CCT8L2Q96SF2 557 aa17.41■□□□□ 0.38
CACFD1-206ENST00000540581 NOC2LQ9Y3T9 749 aaKnown RBP17.41■□□□□ 0.38
CACFD1-206ENST00000540581 PCDHA2Q9Y5H9 948 aa17.41■□□□□ 0.38
CACFD1-206ENST00000540581 ABCB11O95342 1321 aa17.41■□□□□ 0.38
CACFD1-206ENST00000540581 PPP1R37O75864 691 aa17.41■□□□□ 0.38
CACFD1-206ENST00000540581 AKAP3O75969 853 aa17.41■□□□□ 0.38
CACFD1-206ENST00000540581 DOK7Q18PE1 504 aa17.41■□□□□ 0.38
CACFD1-206ENST00000540581 FAM196AQ6ZSG2 479 aa17.41■□□□□ 0.38
CACFD1-206ENST00000540581 TAF1DQ9H5J8 278 aaPredicted RBP17.41■□□□□ 0.38
CACFD1-206ENST00000540581 FBXL5Q9UKA1 691 aa17.41■□□□□ 0.38
CACFD1-206ENST00000540581 DCDC2CA8MYV0 355 aa17.4■□□□□ 0.38
CACFD1-206ENST00000540581 TTI1O43156 1089 aa17.4■□□□□ 0.38
CACFD1-206ENST00000540581 GCNT3O95395 438 aa17.4■□□□□ 0.38
CACFD1-206ENST00000540581 PPP4R3AQ6IN85 833 aa17.4■□□□□ 0.38
CACFD1-206ENST00000540581 MMS22LQ6ZRQ5 1243 aa17.4■□□□□ 0.38
CACFD1-206ENST00000540581 IRF2BP2Q7Z5L9 587 aa17.4■□□□□ 0.38
CACFD1-206ENST00000540581 CATSPER3Q86XQ3 398 aa17.4■□□□□ 0.38
CACFD1-206ENST00000540581 REEP2Q9BRK0 252 aa17.4■□□□□ 0.38
CACFD1-206ENST00000540581 TRIM51Q9BSJ1 452 aa17.4■□□□□ 0.38
CACFD1-206ENST00000540581 NUCKS1Q9H1E3 243 aaKnown RBP17.4■□□□□ 0.38
CACFD1-206ENST00000540581 OSGEPQ9NPF4 335 aa17.4■□□□□ 0.38
CACFD1-206ENST00000540581 USP40Q9NVE5 1235 aa17.4■□□□□ 0.38
CACFD1-206ENST00000540581 NAGPAQ9UK23 515 aa17.4■□□□□ 0.38
CACFD1-206ENST00000540581 CNTNAP4Q9C0A0 1308 aa17.4■□□□□ 0.38
CACFD1-206ENST00000540581 ZBTB5O15062 677 aa17.4■□□□□ 0.38
CACFD1-206ENST00000540581 CHMP2AO43633 222 aa17.4■□□□□ 0.38
CACFD1-206ENST00000540581 XRCC5P13010 732 aaKnown RBP17.4■□□□□ 0.38
CACFD1-206ENST00000540581 PLCG2P16885 1265 aa17.4■□□□□ 0.38
CACFD1-206ENST00000540581 PON1P27169 355 aa17.4■□□□□ 0.38
CACFD1-206ENST00000540581 HOXA13P31271 388 aaPredicted RBP17.4■□□□□ 0.38
CACFD1-206ENST00000540581 MDH1P40925 334 aaKnown RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms