RNA–Protein interactions for RNA: ENST00000540574.5

PHC1-208, Transcript of polyhomeotic homolog 1, humanhuman

TSL 1 (best)

Gene PHC1, Length 3,869 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-208ENST00000540574 BIRC3Q13489 604 aa10.82□□□□□ -0.68
PHC1-208ENST00000540574 CATSPER3Q86XQ3 398 aa10.82□□□□□ -0.68
PHC1-208ENST00000540574 ELOA2Q8IYF1 753 aaPredicted RBP10.82□□□□□ -0.68
PHC1-208ENST00000540574 SH2D3CQ8N5H7 860 aa10.82□□□□□ -0.68
PHC1-208ENST00000540574 JDP2Q8WYK2 163 aa10.82□□□□□ -0.68
PHC1-208ENST00000540574 PRMT6Q96LA8 375 aaPredicted RBP10.82□□□□□ -0.68
PHC1-208ENST00000540574 MMTAG2Q9BU76 263 aaKnown RBP10.82□□□□□ -0.68
PHC1-208ENST00000540574 GCFC2P16383 781 aaKnown RBP10.82□□□□□ -0.68
PHC1-208ENST00000540574 SHMT1P34896 483 aa10.82□□□□□ -0.68
PHC1-208ENST00000540574 APTXQ7Z2E3 356 aaKnown RBP10.82□□□□□ -0.68
PHC1-208ENST00000540574 LRRC15Q8TF66 581 aa10.82□□□□□ -0.68
PHC1-208ENST00000540574 BBXQ8WY36 941 aaPredicted RBP10.82□□□□□ -0.68
PHC1-208ENST00000540574 DDX47Q9H0S4 455 aaKnown RBP10.82□□□□□ -0.68
PHC1-208ENST00000540574 BCAS3Q9H6U6 928 aa10.82□□□□□ -0.68
PHC1-208ENST00000540574 REXO2Q9Y3B8 237 aaKnown RBP10.82□□□□□ -0.68
PHC1-208ENST00000540574 ALS2Q96Q42 1657 aa10.81□□□□□ -0.68
PHC1-208ENST00000540574 MYH13Q9UKX3 1938 aa10.81□□□□□ -0.68
PHC1-208ENST00000540574 A0A087X0T9 212 aa10.81□□□□□ -0.68
PHC1-208ENST00000540574 EBAG9O00559 213 aa10.81□□□□□ -0.68
PHC1-208ENST00000540574 FAM228BP0C875 321 aa10.81□□□□□ -0.68
PHC1-208ENST00000540574 XKR9Q5GH70 373 aa10.81□□□□□ -0.68
PHC1-208ENST00000540574 BEND6Q5SZJ8 279 aaPredicted RBP10.81□□□□□ -0.68
PHC1-208ENST00000540574 RSRC2Q7L4I2 434 aaKnown RBP10.81□□□□□ -0.68
PHC1-208ENST00000540574 COL23A1Q86Y22 540 aaPredicted RBP10.81□□□□□ -0.68
PHC1-208ENST00000540574 NR3C1P04150 777 aa10.81□□□□□ -0.68
PHC1-208ENST00000540574 SSTR3P32745 418 aaPredicted RBP10.81□□□□□ -0.68
PHC1-208ENST00000540574 CDR1P51861 262 aa10.81□□□□□ -0.68
PHC1-208ENST00000540574 MESDQ14696 234 aa10.81□□□□□ -0.68
PHC1-208ENST00000540574 TMEM179Q6ZVK1 233 aa10.81□□□□□ -0.68
PHC1-208ENST00000540574 DDX42Q86XP3 938 aaKnown RBP eCLIP10.81□□□□□ -0.68
PHC1-208ENST00000540574 CCDC50Q8IVM0 306 aa10.81□□□□□ -0.68
PHC1-208ENST00000540574 GLYCTKQ8IVS8 523 aa10.81□□□□□ -0.68
PHC1-208ENST00000540574 EIF2AK1Q9BQI3 630 aaKnown RBP10.81□□□□□ -0.68
PHC1-208ENST00000540574 RBM12Q9NTZ6 932 aaKnown RBP10.81□□□□□ -0.68
PHC1-208ENST00000540574 PTPN22Q9Y2R2 807 aa10.81□□□□□ -0.68
PHC1-208ENST00000540574 SERPING1P05155 500 aa10.81□□□□□ -0.68
PHC1-208ENST00000540574 TUBBP07437 444 aa10.81□□□□□ -0.68
PHC1-208ENST00000540574 COPB2P35606 906 aa10.81□□□□□ -0.68
PHC1-208ENST00000540574 NAP1L4Q99733 375 aaKnown RBP10.81□□□□□ -0.68
PHC1-208ENST00000540574 ZNF341Q9BYN7 854 aa10.81□□□□□ -0.68
PHC1-208ENST00000540574 GLT8D2Q9H1C3 349 aa10.81□□□□□ -0.68
PHC1-208ENST00000540574 USTQ9Y2C2 406 aa10.81□□□□□ -0.68
PHC1-208ENST00000540574 PARP4Q9UKK3 1724 aaKnown RBP10.8□□□□□ -0.68
PHC1-208ENST00000540574 PDE2AO00408 941 aaPredicted RBP10.8□□□□□ -0.68
PHC1-208ENST00000540574 GCLMP48507 274 aa10.8□□□□□ -0.68
PHC1-208ENST00000540574 TUBB4BP68371 445 aa10.8□□□□□ -0.68
PHC1-208ENST00000540574 ADCY1Q08828 1119 aa10.8□□□□□ -0.68
PHC1-208ENST00000540574 PDXDC1Q6P996 788 aa10.8□□□□□ -0.68
PHC1-208ENST00000540574 PODNQ7Z5L7 613 aa10.8□□□□□ -0.68
PHC1-208ENST00000540574 TAB3Q8N5C8 712 aaPredicted RBP10.8□□□□□ -0.68
PHC1-208ENST00000540574 FAM71BQ8TC56 605 aa10.8□□□□□ -0.68
PHC1-208ENST00000540574 CHURC1Q8WUH1 139 aa10.8□□□□□ -0.68
PHC1-208ENST00000540574 RIOX1Q9H6W3 641 aa10.8□□□□□ -0.68
PHC1-208ENST00000540574 SNX12Q9UMY4 172 aa10.8□□□□□ -0.68
PHC1-208ENST00000540574 BUB1BO60566 1050 aaPredicted RBP10.8□□□□□ -0.68
PHC1-208ENST00000540574 GNA14O95837 355 aa10.8□□□□□ -0.68
PHC1-208ENST00000540574 KRT14P02533 472 aa10.8□□□□□ -0.68
PHC1-208ENST00000540574 ACTN2P35609 894 aa10.8□□□□□ -0.68
PHC1-208ENST00000540574 CASP5P51878 434 aa10.8□□□□□ -0.68
PHC1-208ENST00000540574 PDCLQ13371 301 aa10.8□□□□□ -0.68
PHC1-208ENST00000540574 KNOP1Q1ED39 458 aaKnown RBP10.8□□□□□ -0.68
PHC1-208ENST00000540574 MTMR8Q96EF0 704 aa10.8□□□□□ -0.68
PHC1-208ENST00000540574 TMEM39BQ9GZU3 492 aa10.8□□□□□ -0.68
PHC1-208ENST00000540574 DNAJC17Q9NVM6 304 aaKnown RBP10.8□□□□□ -0.68
PHC1-208ENST00000540574 PLEKHG2Q9H7P9 1386 aa10.8□□□□□ -0.68
PHC1-208ENST00000540574 TRIM66O15016 1216 aa10.8□□□□□ -0.68
PHC1-208ENST00000540574 CYP11B2P19099 503 aa10.8□□□□□ -0.68
PHC1-208ENST00000540574 LIG3P49916 1009 aa10.8□□□□□ -0.68
PHC1-208ENST00000540574 TTLL12Q14166 644 aaPredicted RBP10.8□□□□□ -0.68
PHC1-208ENST00000540574 CENPPQ6IPU0 288 aa10.8□□□□□ -0.68
PHC1-208ENST00000540574 DNAJC7Q99615 494 aa10.8□□□□□ -0.68
PHC1-208ENST00000540574 PARVGQ9HBI0 331 aa10.8□□□□□ -0.68
PHC1-208ENST00000540574 RAVER2Q9HCJ3 691 aaKnown RBP10.8□□□□□ -0.68
PHC1-208ENST00000540574 UBE2TQ9NPD8 197 aaPredicted RBP10.8□□□□□ -0.68
PHC1-208ENST00000540574 PRR12Q9ULL5 1215 aa10.8□□□□□ -0.68
PHC1-208ENST00000540574 PLAGL2Q9UPG8 496 aa10.8□□□□□ -0.68
PHC1-208ENST00000540574 TUBGCP6Q96RT7 1819 aa10.79□□□□□ -0.68
PHC1-208ENST00000540574 GOLGA6L10A0A0M3HER8 536 aa10.79□□□□□ -0.68
PHC1-208ENST00000540574 PPP1R11O60927 126 aaPredicted RBP10.79□□□□□ -0.68
PHC1-208ENST00000540574 IVLP07476 585 aa10.79□□□□□ -0.68
PHC1-208ENST00000540574 CTNNA1P35221 906 aaKnown RBP10.79□□□□□ -0.68
PHC1-208ENST00000540574 PAK2Q13177 524 aa10.79□□□□□ -0.68
PHC1-208ENST00000540574 PDIA5Q14554 519 aa10.79□□□□□ -0.68
PHC1-208ENST00000540574 KRT71Q3SY84 523 aa10.79□□□□□ -0.68
PHC1-208ENST00000540574 EEPD1Q7L9B9 569 aa10.79□□□□□ -0.68
PHC1-208ENST00000540574 LMBR1Q8WVP7 490 aa10.79□□□□□ -0.68
PHC1-208ENST00000540574 PAIP2Q9BPZ3 127 aaKnown RBP10.79□□□□□ -0.68
PHC1-208ENST00000540574 ADAMTSL3P82987 1691 aa10.79□□□□□ -0.68
PHC1-208ENST00000540574 LRRC10BA6NIK2 292 aa10.79□□□□□ -0.68
PHC1-208ENST00000540574 FGRP09769 529 aa10.79□□□□□ -0.68
PHC1-208ENST00000540574 PBX1P40424 430 aa10.79□□□□□ -0.68
PHC1-208ENST00000540574 PEX3P56589 373 aa10.79□□□□□ -0.68
PHC1-208ENST00000540574 PSMD2Q13200 908 aa10.79□□□□□ -0.68
PHC1-208ENST00000540574 DAGLBQ8NCG7 672 aa10.79□□□□□ -0.68
PHC1-208ENST00000540574 ZNF668Q96K58 619 aaPredicted RBP10.79□□□□□ -0.68
PHC1-208ENST00000540574 RPGRIP1Q96KN7 1286 aa10.79□□□□□ -0.68
PHC1-208ENST00000540574 SH2D4AQ9H788 454 aa10.79□□□□□ -0.68
PHC1-208ENST00000540574 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.79□□□□□ -0.68
PHC1-208ENST00000540574 STIM2Q9P246 746 aa10.79□□□□□ -0.68
PHC1-208ENST00000540574 AMFRQ9UKV5 643 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 190.5 ms