RNA–Protein interactions for RNA: ENST00000540418.5

MDM1-210, Transcript of Mdm1 nuclear protein, humanhuman

TSL 1 (best)

Gene MDM1, Length 2,507 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-210ENST00000540418 PDXDC2PQ6P474 469 aa16.8■□□□□ 0.28
MDM1-210ENST00000540418 FAM173BQ6P4H8 233 aa16.8■□□□□ 0.28
MDM1-210ENST00000540418 PPP1R13LQ8WUF5 828 aa16.8■□□□□ 0.28
MDM1-210ENST00000540418 FOXD4L4Q8WXT5 416 aaPredicted RBP16.8■□□□□ 0.28
MDM1-210ENST00000540418 HDAC6Q9UBN7 1215 aa16.8■□□□□ 0.28
MDM1-210ENST00000540418 GABBR1Q9UBS5 961 aa16.8■□□□□ 0.28
MDM1-210ENST00000540418 DCDC2CA8MYV0 355 aa16.79■□□□□ 0.28
MDM1-210ENST00000540418 EVI5O60447 810 aa16.79■□□□□ 0.28
MDM1-210ENST00000540418 PQBP1O60828 265 aaKnown RBP16.79■□□□□ 0.28
MDM1-210ENST00000540418 PRPHP41219 470 aa16.79■□□□□ 0.28
MDM1-210ENST00000540418 TECP42680 631 aa16.79■□□□□ 0.28
MDM1-210ENST00000540418 NCAPH2Q6IBW4 605 aa16.79■□□□□ 0.28
MDM1-210ENST00000540418 CEP131Q9UPN4 1083 aa16.79■□□□□ 0.28
MDM1-210ENST00000540418 BMP15O95972 392 aa16.79■□□□□ 0.28
MDM1-210ENST00000540418 MARK3P27448 753 aa16.79■□□□□ 0.28
MDM1-210ENST00000540418 ATP2C1P98194 919 aaPredicted RBP16.79■□□□□ 0.28
MDM1-210ENST00000540418 EPHA7Q15375 998 aa16.79■□□□□ 0.28
MDM1-210ENST00000540418 FAM126BQ8IXS8 530 aa16.79■□□□□ 0.28
MDM1-210ENST00000540418 TNPO1Q92973 898 aaKnown RBP16.79■□□□□ 0.28
MDM1-210ENST00000540418 BRD1O95696 1058 aa16.78■□□□□ 0.28
MDM1-210ENST00000540418 SMIM10L2AP0DMW4 78 aa16.78■□□□□ 0.28
MDM1-210ENST00000540418 SMIM10L2BP0DMW5 78 aa16.78■□□□□ 0.28
MDM1-210ENST00000540418 SF3A1Q15459 793 aaKnown RBP16.78■□□□□ 0.28
MDM1-210ENST00000540418 TMEM266Q2M3C6 531 aa16.78■□□□□ 0.28
MDM1-210ENST00000540418 GTF2IRD1Q9UHL9 959 aa16.78■□□□□ 0.28
MDM1-210ENST00000540418 TLR3O15455 904 aaKnown RBP16.78■□□□□ 0.28
MDM1-210ENST00000540418 CD4P01730 458 aa16.78■□□□□ 0.28
MDM1-210ENST00000540418 FXR2P51116 673 aaKnown RBP eCLIP16.78■□□□□ 0.28
MDM1-210ENST00000540418 PLCB4Q15147 1175 aa16.78■□□□□ 0.28
MDM1-210ENST00000540418 DTHD1Q6ZMT9 781 aa16.78■□□□□ 0.28
MDM1-210ENST00000540418 TSHZ2Q9NRE2 1034 aa16.78■□□□□ 0.28
MDM1-210ENST00000540418 CLIC4Q9Y696 253 aa16.78■□□□□ 0.28
MDM1-210ENST00000540418 SCN10AQ9Y5Y9 1956 aa16.78■□□□□ 0.28
MDM1-210ENST00000540418 DNAH12Q6ZR08 3092 aa16.77■□□□□ 0.28
MDM1-210ENST00000540418 ATP4AP20648 1035 aa16.77■□□□□ 0.28
MDM1-210ENST00000540418 FAAP100Q0VG06 881 aa16.77■□□□□ 0.28
MDM1-210ENST00000540418 PDIA5Q14554 519 aa16.77■□□□□ 0.28
MDM1-210ENST00000540418 ARL6IP4Q66PJ3 421 aaKnown RBP16.77■□□□□ 0.28
MDM1-210ENST00000540418 TRPV6Q9H1D0 765 aa16.77■□□□□ 0.28
MDM1-210ENST00000540418 ZDHHC9Q9Y397 364 aa16.77■□□□□ 0.28
MDM1-210ENST00000540418 RBM19Q9Y4C8 960 aaKnown RBP16.77■□□□□ 0.28
MDM1-210ENST00000540418 POTEB3A0JP26 581 aa16.77■□□□□ 0.28
MDM1-210ENST00000540418 B4GALT4O60513 344 aa16.77■□□□□ 0.28
MDM1-210ENST00000540418 P4HBP07237 508 aaKnown RBP16.77■□□□□ 0.28
MDM1-210ENST00000540418 GNAT1P11488 350 aa16.77■□□□□ 0.28
MDM1-210ENST00000540418 GDF6Q6KF10 455 aaPredicted RBP16.77■□□□□ 0.28
MDM1-210ENST00000540418 POTEBQ6S5H4 581 aa16.77■□□□□ 0.28
MDM1-210ENST00000540418 CKAP2LQ8IYA6 745 aa16.77■□□□□ 0.28
MDM1-210ENST00000540418 C7orf61Q8IZ16 206 aa16.77■□□□□ 0.28
MDM1-210ENST00000540418 ATP8B4Q8TF62 1192 aa16.77■□□□□ 0.28
MDM1-210ENST00000540418 ATP6V0A1Q93050 837 aa16.77■□□□□ 0.28
MDM1-210ENST00000540418 ZNF396Q96N95 335 aaPredicted RBP16.77■□□□□ 0.28
MDM1-210ENST00000540418 TRMT13Q9NUP7 481 aaKnown RBP16.77■□□□□ 0.28
MDM1-210ENST00000540418 NRCAMQ92823 1304 aa16.77■□□□□ 0.27
MDM1-210ENST00000540418 IGSF9BQ9UPX0 1349 aa16.77■□□□□ 0.27
MDM1-210ENST00000540418 C17orf102A2RUQ5 167 aa16.76■□□□□ 0.27
MDM1-210ENST00000540418 HOXC8P31273 242 aa16.76■□□□□ 0.27
MDM1-210ENST00000540418 DDIT3P35638 169 aa16.76■□□□□ 0.27
MDM1-210ENST00000540418 PSMC5P62195 406 aa16.76■□□□□ 0.27
MDM1-210ENST00000540418 IL17AQ16552 155 aa16.76■□□□□ 0.27
MDM1-210ENST00000540418 UGCGQ16739 394 aa16.76■□□□□ 0.27
MDM1-210ENST00000540418 EIF2AK1Q9BQI3 630 aaKnown RBP16.76■□□□□ 0.27
MDM1-210ENST00000540418 RAB34Q9BZG1 259 aa16.76■□□□□ 0.27
MDM1-210ENST00000540418 SETD4Q9NVD3 440 aa16.76■□□□□ 0.27
MDM1-210ENST00000540418 TRPC6Q9Y210 931 aa16.76■□□□□ 0.27
MDM1-210ENST00000540418 POTEMA6NI47 508 aa16.76■□□□□ 0.27
MDM1-210ENST00000540418 ZNF862O60290 1169 aa16.76■□□□□ 0.27
MDM1-210ENST00000540418 HBP1O60381 514 aa16.76■□□□□ 0.27
MDM1-210ENST00000540418 DKC1O60832 514 aaKnown RBP eCLIP16.76■□□□□ 0.27
MDM1-210ENST00000540418 CLTBP09497 229 aa16.76■□□□□ 0.27
MDM1-210ENST00000540418 QARSP47897 775 aaKnown RBP16.76■□□□□ 0.27
MDM1-210ENST00000540418 PTGISQ16647 500 aa16.76■□□□□ 0.27
MDM1-210ENST00000540418 BANK1Q8NDB2 785 aa16.76■□□□□ 0.27
MDM1-210ENST00000540418 BBXQ8WY36 941 aaPredicted RBP16.76■□□□□ 0.27
MDM1-210ENST00000540418 USP28Q96RU2 1077 aa16.76■□□□□ 0.27
MDM1-210ENST00000540418 HSD17B14Q9BPX1 270 aa16.76■□□□□ 0.27
MDM1-210ENST00000540418 FTOQ9C0B1 505 aaKnown RBP eCLIP16.76■□□□□ 0.27
MDM1-210ENST00000540418 NRBP2Q9NSY0 501 aa16.76■□□□□ 0.27
MDM1-210ENST00000540418 NR2E3Q9Y5X4 410 aa16.76■□□□□ 0.27
MDM1-210ENST00000540418 INSRRP14616 1297 aa16.75■□□□□ 0.27
MDM1-210ENST00000540418 PPFIA1Q13136 1202 aa16.75■□□□□ 0.27
MDM1-210ENST00000540418 HIC1Q14526 733 aa16.75■□□□□ 0.27
MDM1-210ENST00000540418 IGSF22Q8N9C0 903 aa16.75■□□□□ 0.27
MDM1-210ENST00000540418 DYDC2Q96IM9 177 aa16.75■□□□□ 0.27
MDM1-210ENST00000540418 FAM167AQ96KS9 214 aa16.75■□□□□ 0.27
MDM1-210ENST00000540418 RGL1Q9NZL6 768 aa16.75■□□□□ 0.27
MDM1-210ENST00000540418 RRN3P2A6NIE6 340 aa16.75■□□□□ 0.27
MDM1-210ENST00000540418 SLITRK3O94933 977 aa16.75■□□□□ 0.27
MDM1-210ENST00000540418 CEBPZQ03701 1054 aaKnown RBP16.75■□□□□ 0.27
MDM1-210ENST00000540418 PTPAQ15257 358 aa16.75■□□□□ 0.27
MDM1-210ENST00000540418 NEK9Q8TD19 979 aa16.75■□□□□ 0.27
MDM1-210ENST00000540418 TMEM39AQ9NV64 488 aa16.75■□□□□ 0.27
MDM1-210ENST00000540418 LRWD1Q9UFC0 647 aa16.75■□□□□ 0.27
MDM1-210ENST00000540418 NOD1Q9Y239 953 aa16.75■□□□□ 0.27
MDM1-210ENST00000540418 OATP04181 439 aa16.74■□□□□ 0.27
MDM1-210ENST00000540418 ADAM17P78536 824 aa16.74■□□□□ 0.27
MDM1-210ENST00000540418 NUCB2P80303 420 aa16.74■□□□□ 0.27
MDM1-210ENST00000540418 ZNF200P98182 395 aaPredicted RBP16.74■□□□□ 0.27
MDM1-210ENST00000540418 PRKCEQ02156 737 aa16.74■□□□□ 0.27
MDM1-210ENST00000540418 GRIK4Q16099 956 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms