RNA–Protein interactions for RNA: ENST00000540304.5

CLIP1-212, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5

Gene CLIP1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-212ENST00000540304 SUPT20HL1Q3ZLR7 823 aa10.68□□□□□ -0.7
CLIP1-212ENST00000540304 HERC4Q5GLZ8 1057 aaPredicted RBP10.68□□□□□ -0.7
CLIP1-212ENST00000540304 MUM1L1Q5H9M0 696 aa10.68□□□□□ -0.7
CLIP1-212ENST00000540304 NIPA1Q7RTP0 329 aa10.68□□□□□ -0.7
CLIP1-212ENST00000540304 GLIS3Q8NEA6 775 aa10.68□□□□□ -0.7
CLIP1-212ENST00000540304 HSD17B14Q9BPX1 270 aa10.68□□□□□ -0.7
CLIP1-212ENST00000540304 TEKT3Q9BXF9 490 aa10.68□□□□□ -0.7
CLIP1-212ENST00000540304 HOMER2Q9NSB8 354 aa10.68□□□□□ -0.7
CLIP1-212ENST00000540304 OGFRQ9NZT2 677 aa10.68□□□□□ -0.7
CLIP1-212ENST00000540304 PCDHA2Q9Y5H9 948 aa10.68□□□□□ -0.7
CLIP1-212ENST00000540304 ZHX2Q9Y6X8 837 aa10.68□□□□□ -0.7
CLIP1-212ENST00000540304 PCNTO95613 3336 aa10.68□□□□□ -0.7
CLIP1-212ENST00000540304 LOXHD1Q8IVV2 1947 aa10.68□□□□□ -0.7
CLIP1-212ENST00000540304 FRMPD4Q14CM0 1322 aa10.68□□□□□ -0.7
CLIP1-212ENST00000540304 POLR2AP24928 1970 aaKnown RBP10.68□□□□□ -0.7
CLIP1-212ENST00000540304 IPO5O00410 1097 aaKnown RBP10.68□□□□□ -0.7
CLIP1-212ENST00000540304 VWA5AO00534 786 aa10.68□□□□□ -0.7
CLIP1-212ENST00000540304 CHMP2AO43633 222 aa10.68□□□□□ -0.7
CLIP1-212ENST00000540304 MUTP22033 750 aa10.68□□□□□ -0.7
CLIP1-212ENST00000540304 FECHP22830 423 aa10.68□□□□□ -0.7
CLIP1-212ENST00000540304 GIT2Q14161 759 aa10.68□□□□□ -0.7
CLIP1-212ENST00000540304 NOL9Q5SY16 702 aaKnown RBP10.68□□□□□ -0.7
CLIP1-212ENST00000540304 PCNX4Q63HM2 1172 aa10.68□□□□□ -0.7
CLIP1-212ENST00000540304 SYTL5Q8TDW5 730 aaPredicted RBP10.68□□□□□ -0.7
CLIP1-212ENST00000540304 RIT2Q99578 217 aa10.68□□□□□ -0.7
CLIP1-212ENST00000540304 NOC4LQ9BVI4 516 aaKnown RBP10.68□□□□□ -0.7
CLIP1-212ENST00000540304 FHDC1Q9C0D6 1143 aaPredicted RBP10.68□□□□□ -0.7
CLIP1-212ENST00000540304 RGL1Q9NZL6 768 aa10.68□□□□□ -0.7
CLIP1-212ENST00000540304 FZD1Q9UP38 647 aa10.68□□□□□ -0.7
CLIP1-212ENST00000540304 PPP2R2CQ9Y2T4 447 aa10.68□□□□□ -0.7
CLIP1-212ENST00000540304 WDR90Q96KV7 1748 aa10.67□□□□□ -0.7
CLIP1-212ENST00000540304 GOLGA6L9A6NEM1 432 aa10.67□□□□□ -0.7
CLIP1-212ENST00000540304 RIOK3O14730 519 aaKnown RBP10.67□□□□□ -0.7
CLIP1-212ENST00000540304 ITGB5P18084 799 aa10.67□□□□□ -0.7
CLIP1-212ENST00000540304 GTF2F1P35269 517 aaKnown RBP eCLIP10.67□□□□□ -0.7
CLIP1-212ENST00000540304 HMGCS2P54868 508 aa10.67□□□□□ -0.7
CLIP1-212ENST00000540304 CTTNQ14247 550 aaKnown RBP10.67□□□□□ -0.7
CLIP1-212ENST00000540304 ZCWPW2Q504Y3 356 aa10.67□□□□□ -0.7
CLIP1-212ENST00000540304 MIIPQ5JXC2 388 aa10.67□□□□□ -0.7
CLIP1-212ENST00000540304 LRRC55Q6ZSA7 311 aa10.67□□□□□ -0.7
CLIP1-212ENST00000540304 IFNLR1Q8IU57 520 aaPredicted RBP10.67□□□□□ -0.7
CLIP1-212ENST00000540304 ITFG2Q969R8 447 aa10.67□□□□□ -0.7
CLIP1-212ENST00000540304 ATG4CQ96DT6 458 aa10.67□□□□□ -0.7
CLIP1-212ENST00000540304 DYDC2Q96IM9 177 aa10.67□□□□□ -0.7
CLIP1-212ENST00000540304 REEP2Q9BRK0 252 aa10.67□□□□□ -0.7
CLIP1-212ENST00000540304 BHMT2Q9H2M3 363 aa10.67□□□□□ -0.7
CLIP1-212ENST00000540304 CXorf56Q9H5V9 222 aa10.67□□□□□ -0.7
CLIP1-212ENST00000540304 ABHD10Q9NUJ1 306 aa10.67□□□□□ -0.7
CLIP1-212ENST00000540304 TBC1D7Q9P0N9 293 aa10.67□□□□□ -0.7
CLIP1-212ENST00000540304 NKRFO15226 690 aaKnown RBP eCLIP10.67□□□□□ -0.7
CLIP1-212ENST00000540304 SLITRK3O94933 977 aa10.67□□□□□ -0.7
CLIP1-212ENST00000540304 ERCC3P19447 782 aa10.67□□□□□ -0.7
CLIP1-212ENST00000540304 B3GNT9Q6UX72 402 aa10.67□□□□□ -0.7
CLIP1-212ENST00000540304 TOGARAM2Q6ZUX3 1019 aa10.67□□□□□ -0.7
CLIP1-212ENST00000540304 TPH2Q8IWU9 490 aa10.67□□□□□ -0.7
CLIP1-212ENST00000540304 REXO1L1PQ8IX06 675 aa10.67□□□□□ -0.7
CLIP1-212ENST00000540304 IL31RAQ8NI17 732 aa10.67□□□□□ -0.7
CLIP1-212ENST00000540304 KIF18AQ8NI77 898 aa10.67□□□□□ -0.7
CLIP1-212ENST00000540304 FGFBP2Q9BYJ0 223 aa10.67□□□□□ -0.7
CLIP1-212ENST00000540304 RASSF4Q9H2L5 321 aa10.67□□□□□ -0.7
CLIP1-212ENST00000540304 UNC45AQ9H3U1 944 aa10.67□□□□□ -0.7
CLIP1-212ENST00000540304 ZHX3Q9H4I2 956 aa10.67□□□□□ -0.7
CLIP1-212ENST00000540304 SOWAHDA6NJG2 315 aa10.66□□□□□ -0.7
CLIP1-212ENST00000540304 KIF1CO43896 1103 aaKnown RBP10.66□□□□□ -0.7
CLIP1-212ENST00000540304 OAZ1P54368 228 aa10.66□□□□□ -0.7
CLIP1-212ENST00000540304 RPS6P62753 249 aaKnown RBP10.66□□□□□ -0.7
CLIP1-212ENST00000540304 FKBP3Q00688 224 aaKnown RBP10.66□□□□□ -0.7
CLIP1-212ENST00000540304 TBC1D8BQ0IIM8 1120 aa10.66□□□□□ -0.7
CLIP1-212ENST00000540304 EPHA7Q15375 998 aa10.66□□□□□ -0.7
CLIP1-212ENST00000540304 MAN2A1Q16706 1144 aa10.66□□□□□ -0.7
CLIP1-212ENST00000540304 FKBP15Q5T1M5 1219 aa10.66□□□□□ -0.7
CLIP1-212ENST00000540304 RNF207Q6ZRF8 634 aa10.66□□□□□ -0.7
CLIP1-212ENST00000540304 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.66□□□□□ -0.7
CLIP1-212ENST00000540304 NEK9Q8TD19 979 aa10.66□□□□□ -0.7
CLIP1-212ENST00000540304 SCFD1Q8WVM8 642 aa10.66□□□□□ -0.7
CLIP1-212ENST00000540304 NUP58Q9BVL2 599 aa10.66□□□□□ -0.7
CLIP1-212ENST00000540304 KCNH7Q9NS40 1196 aa10.66□□□□□ -0.7
CLIP1-212ENST00000540304 TMOD4Q9NZQ9 345 aa10.66□□□□□ -0.7
CLIP1-212ENST00000540304 UBIAD1Q9Y5Z9 338 aa10.66□□□□□ -0.7
CLIP1-212ENST00000540304 RPS6KL1Q9Y6S9 549 aa10.66□□□□□ -0.7
CLIP1-212ENST00000540304 TBCAO75347 108 aaKnown RBP10.66□□□□□ -0.7
CLIP1-212ENST00000540304 DDNO94850 711 aaPredicted RBP10.66□□□□□ -0.7
CLIP1-212ENST00000540304 KRT9P35527 623 aa10.66□□□□□ -0.7
CLIP1-212ENST00000540304 TKFCQ3LXA3 575 aa10.66□□□□□ -0.7
CLIP1-212ENST00000540304 VWA3BQ502W6 1294 aa10.66□□□□□ -0.7
CLIP1-212ENST00000540304 TMTC1Q8IUR5 882 aa10.66□□□□□ -0.7
CLIP1-212ENST00000540304 RETREG2Q8NC44 543 aa10.66□□□□□ -0.7
CLIP1-212ENST00000540304 REPS2Q8NFH8 660 aa10.66□□□□□ -0.7
CLIP1-212ENST00000540304 WNK4Q96J92 1243 aa10.66□□□□□ -0.7
CLIP1-212ENST00000540304 DRC1Q96MC2 740 aa10.66□□□□□ -0.7
CLIP1-212ENST00000540304 CEP63Q96MT8 703 aa10.66□□□□□ -0.7
CLIP1-212ENST00000540304 RUSC1Q9BVN2 902 aa10.66□□□□□ -0.7
CLIP1-212ENST00000540304 JADE2Q9NQC1 790 aa10.66□□□□□ -0.7
CLIP1-212ENST00000540304 ADARB2Q9NS39 739 aaKnown RBP10.66□□□□□ -0.7
CLIP1-212ENST00000540304 RNF146Q9NTX7 359 aa10.66□□□□□ -0.7
CLIP1-212ENST00000540304 CAPN11Q9UMQ6 739 aa10.66□□□□□ -0.7
CLIP1-212ENST00000540304 ADAMTS5Q9UNA0 930 aa10.66□□□□□ -0.7
CLIP1-212ENST00000540304 PAPPA2Q9BXP8 1791 aa10.65□□□□□ -0.7
CLIP1-212ENST00000540304 TTC26A0AVF1 554 aa10.65□□□□□ -0.7
CLIP1-212ENST00000540304 RNF225M0QZC1 329 aaPredicted RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms