RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 U2AF1L4Q8WU68 220 aaKnown RBP21.22■□□□□ 0.99
TNFRSF1A-213ENST00000540022 EMID1Q96A84 441 aaPredicted RBP21.22■□□□□ 0.99
TNFRSF1A-213ENST00000540022 GPR20Q99678 358 aa21.22■□□□□ 0.99
TNFRSF1A-213ENST00000540022 POLR3CQ9BUI4 534 aaPredicted RBP21.22■□□□□ 0.99
TNFRSF1A-213ENST00000540022 STK24Q9Y6E0 443 aa21.22■□□□□ 0.99
TNFRSF1A-213ENST00000540022 CEP290O15078 2479 aa21.21■□□□□ 0.99
TNFRSF1A-213ENST00000540022 POTEB3A0JP26 581 aa21.21■□□□□ 0.99
TNFRSF1A-213ENST00000540022 POLR2DO15514 142 aaKnown RBP21.21■□□□□ 0.99
TNFRSF1A-213ENST00000540022 SLITRK3O94933 977 aa21.21■□□□□ 0.99
TNFRSF1A-213ENST00000540022 MBD3O95983 291 aa21.21■□□□□ 0.99
TNFRSF1A-213ENST00000540022 CTTNQ14247 550 aaKnown RBP21.21■□□□□ 0.99
TNFRSF1A-213ENST00000540022 HYIQ5T013 277 aa21.21■□□□□ 0.99
TNFRSF1A-213ENST00000540022 POTEBQ6S5H4 581 aa21.21■□□□□ 0.99
TNFRSF1A-213ENST00000540022 BANK1Q8NDB2 785 aa21.21■□□□□ 0.99
TNFRSF1A-213ENST00000540022 RASSF8Q8NHQ8 419 aa21.21■□□□□ 0.99
TNFRSF1A-213ENST00000540022 LRRC15Q8TF66 581 aa21.21■□□□□ 0.99
TNFRSF1A-213ENST00000540022 SEPT1Q8WYJ6 367 aa21.21■□□□□ 0.99
TNFRSF1A-213ENST00000540022 CALML4Q96GE6 196 aa21.21■□□□□ 0.99
TNFRSF1A-213ENST00000540022 DACT1Q9NYF0 836 aa21.21■□□□□ 0.99
TNFRSF1A-213ENST00000540022 WRAP73Q9P2S5 460 aaPredicted RBP21.21■□□□□ 0.99
TNFRSF1A-213ENST00000540022 CCDC39Q9UFE4 941 aa21.21■□□□□ 0.99
TNFRSF1A-213ENST00000540022 SEPT4O43236 478 aa21.2■□□□□ 0.98
TNFRSF1A-213ENST00000540022 DYNC1LI2O43237 492 aaPredicted RBP21.2■□□□□ 0.98
TNFRSF1A-213ENST00000540022 ZNF202O95125 648 aa21.2■□□□□ 0.98
TNFRSF1A-213ENST00000540022 SGPL1O95470 568 aa21.2■□□□□ 0.98
TNFRSF1A-213ENST00000540022 P4HBP07237 508 aaKnown RBP21.2■□□□□ 0.98
TNFRSF1A-213ENST00000540022 PSAPP07602 524 aa21.2■□□□□ 0.98
TNFRSF1A-213ENST00000540022 SUPT20HL2P0C7V6 817 aa21.2■□□□□ 0.98
TNFRSF1A-213ENST00000540022 PLCG1P19174 1290 aa21.2■□□□□ 0.98
TNFRSF1A-213ENST00000540022 E2F4Q16254 413 aa21.2■□□□□ 0.98
TNFRSF1A-213ENST00000540022 MIS18BP1Q6P0N0 1132 aa21.2■□□□□ 0.98
TNFRSF1A-213ENST00000540022 OR6J1Q8NGC5 347 aa21.2■□□□□ 0.98
TNFRSF1A-213ENST00000540022 AFG1LQ8WV93 481 aa21.2■□□□□ 0.98
TNFRSF1A-213ENST00000540022 DHX58Q96C10 678 aa21.2■□□□□ 0.98
TNFRSF1A-213ENST00000540022 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.2■□□□□ 0.98
TNFRSF1A-213ENST00000540022 TUFT1Q9NNX1 390 aa21.2■□□□□ 0.98
TNFRSF1A-213ENST00000540022 HMX1Q9NP08 348 aaPredicted RBP21.2■□□□□ 0.98
TNFRSF1A-213ENST00000540022 KDM3AQ9Y4C1 1321 aa21.2■□□□□ 0.98
TNFRSF1A-213ENST00000540022 FRMPD3Q5JV73 1810 aa21.2■□□□□ 0.98
TNFRSF1A-213ENST00000540022 NOP56O00567 594 aaKnown RBP21.19■□□□□ 0.98
TNFRSF1A-213ENST00000540022 TCF7P36402 384 aaPredicted RBP21.19■□□□□ 0.98
TNFRSF1A-213ENST00000540022 UGCGQ16739 394 aa21.19■□□□□ 0.98
TNFRSF1A-213ENST00000540022 TMEM119Q4V9L6 283 aa21.19■□□□□ 0.98
TNFRSF1A-213ENST00000540022 RRAGBQ5VZM2 374 aa21.19■□□□□ 0.98
TNFRSF1A-213ENST00000540022 SWSAP1Q6NVH7 229 aa21.19■□□□□ 0.98
TNFRSF1A-213ENST00000540022 POTEGQ6S5H5 508 aa21.19■□□□□ 0.98
TNFRSF1A-213ENST00000540022 KCNK18Q7Z418 384 aa21.19■□□□□ 0.98
TNFRSF1A-213ENST00000540022 TLK2Q86UE8 772 aa21.19■□□□□ 0.98
TNFRSF1A-213ENST00000540022 CCDC60Q8IWA6 550 aaPredicted RBP21.19■□□□□ 0.98
TNFRSF1A-213ENST00000540022 TPH2Q8IWU9 490 aa21.19■□□□□ 0.98
TNFRSF1A-213ENST00000540022 NEK9Q8TD19 979 aa21.19■□□□□ 0.98
TNFRSF1A-213ENST00000540022 CDK5RAP3Q96JB5 506 aa21.19■□□□□ 0.98
TNFRSF1A-213ENST00000540022 DEFB118Q96PH6 123 aa21.19■□□□□ 0.98
TNFRSF1A-213ENST00000540022 PCYT2Q99447 389 aa21.19■□□□□ 0.98
TNFRSF1A-213ENST00000540022 LXNQ9BS40 222 aa21.19■□□□□ 0.98
TNFRSF1A-213ENST00000540022 KIAA1024Q9UPX6 916 aa21.19■□□□□ 0.98
TNFRSF1A-213ENST00000540022 IGKV6D-21A0A0A0MT36 114 aa21.19■□□□□ 0.98
TNFRSF1A-213ENST00000540022 SLC26A4O43511 780 aa21.19■□□□□ 0.98
TNFRSF1A-213ENST00000540022 IRX5P78411 483 aaPredicted RBP21.19■□□□□ 0.98
TNFRSF1A-213ENST00000540022 LONRF3Q496Y0 759 aa21.19■□□□□ 0.98
TNFRSF1A-213ENST00000540022 NAALADL2Q58DX5 795 aa21.19■□□□□ 0.98
TNFRSF1A-213ENST00000540022 PPTC7Q8NI37 304 aa21.19■□□□□ 0.98
TNFRSF1A-213ENST00000540022 NT5C3AQ9H0P0 336 aa21.19■□□□□ 0.98
TNFRSF1A-213ENST00000540022 DDX19AQ9NUU7 478 aaKnown RBP21.19■□□□□ 0.98
TNFRSF1A-213ENST00000540022 GABBR1Q9UBS5 961 aa21.19■□□□□ 0.98
TNFRSF1A-213ENST00000540022 SERTAD1Q9UHV2 236 aa21.19■□□□□ 0.98
TNFRSF1A-213ENST00000540022 Q9Y3F1 56 aa21.19■□□□□ 0.98
TNFRSF1A-213ENST00000540022 A0A087WWV3 80 aa21.18■□□□□ 0.98
TNFRSF1A-213ENST00000540022 TRAK2O60296 914 aa21.18■□□□□ 0.98
TNFRSF1A-213ENST00000540022 DUSP11O75319 330 aaKnown RBP21.18■□□□□ 0.98
TNFRSF1A-213ENST00000540022 STAT6P42226 847 aa21.18■□□□□ 0.98
TNFRSF1A-213ENST00000540022 QARSP47897 775 aaKnown RBP21.18■□□□□ 0.98
TNFRSF1A-213ENST00000540022 KLHL40Q2TBA0 621 aa21.18■□□□□ 0.98
TNFRSF1A-213ENST00000540022 LHX8Q68G74 356 aa21.18■□□□□ 0.98
TNFRSF1A-213ENST00000540022 UBE2Q1Q7Z7E8 422 aa21.18■□□□□ 0.98
TNFRSF1A-213ENST00000540022 BACH1O14867 736 aa21.17■□□□□ 0.98
TNFRSF1A-213ENST00000540022 ACTN4O43707 911 aaKnown RBP21.17■□□□□ 0.98
TNFRSF1A-213ENST00000540022 MMP3P08254 477 aa21.17■□□□□ 0.98
TNFRSF1A-213ENST00000540022 MUTP22033 750 aa21.17■□□□□ 0.98
TNFRSF1A-213ENST00000540022 PSMC5P62195 406 aa21.17■□□□□ 0.98
TNFRSF1A-213ENST00000540022 PSMC6P62333 389 aa21.17■□□□□ 0.98
TNFRSF1A-213ENST00000540022 IQUBQ8NA54 791 aa21.17■□□□□ 0.98
TNFRSF1A-213ENST00000540022 PYM1Q9BRP8 204 aaKnown RBP21.17■□□□□ 0.98
TNFRSF1A-213ENST00000540022 CRISPLD2Q9H0B8 497 aa21.17■□□□□ 0.98
TNFRSF1A-213ENST00000540022 ZSWIM4Q9H7M6 989 aa21.17■□□□□ 0.98
TNFRSF1A-213ENST00000540022 ZNF302Q9NR11 478 aa21.17■□□□□ 0.98
TNFRSF1A-213ENST00000540022 BLOC1S4Q9NUP1 217 aa21.17■□□□□ 0.98
TNFRSF1A-213ENST00000540022 DDX20Q9UHI6 824 aaKnown RBP21.17■□□□□ 0.98
TNFRSF1A-213ENST00000540022 E9PMD0 336 aa21.16■□□□□ 0.98
TNFRSF1A-213ENST00000540022 ZNF862O60290 1169 aa21.16■□□□□ 0.98
TNFRSF1A-213ENST00000540022 LGR5O75473 907 aa21.16■□□□□ 0.98
TNFRSF1A-213ENST00000540022 SKOR2Q2VWA4 1001 aaPredicted RBP21.16■□□□□ 0.98
TNFRSF1A-213ENST00000540022 UTP14CQ5TAP6 766 aaKnown RBP21.16■□□□□ 0.98
TNFRSF1A-213ENST00000540022 PRPF38BQ5VTL8 546 aaKnown RBP21.16■□□□□ 0.98
TNFRSF1A-213ENST00000540022 KRBA2Q6ZNG9 492 aa21.16■□□□□ 0.98
TNFRSF1A-213ENST00000540022 AP5M1Q9H0R1 490 aa21.16■□□□□ 0.98
TNFRSF1A-213ENST00000540022 MAFBQ9Y5Q3 323 aaPredicted RBP21.16■□□□□ 0.98
TNFRSF1A-213ENST00000540022 DOCK5Q9H7D0 1870 aa21.16■□□□□ 0.98
TNFRSF1A-213ENST00000540022 ALPK3Q96L96 1907 aa21.16■□□□□ 0.98
TNFRSF1A-213ENST00000540022 IGSF9BQ9UPX0 1349 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms