RNA–Protein interactions for RNA: ENST00000539960.1

PRPF19-204, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 2

Gene PRPF19, Length 796 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-204ENST00000539960 COLQQ9Y215 455 aaPredicted RBP15.17■□□□□ 0.02
PRPF19-204ENST00000539960 SAMM50Q9Y512 469 aa15.17■□□□□ 0.02
PRPF19-204ENST00000539960 NRCAMQ92823 1304 aa15.17■□□□□ 0.02
PRPF19-204ENST00000539960 WDR64B1ANS9 1081 aa15.16■□□□□ 0.02
PRPF19-204ENST00000539960 WNT7AO00755 349 aa15.16■□□□□ 0.02
PRPF19-204ENST00000539960 MARCH6O60337 910 aa15.16■□□□□ 0.02
PRPF19-204ENST00000539960 CYP2C18P33260 490 aa15.16■□□□□ 0.02
PRPF19-204ENST00000539960 SLC26A2P50443 739 aa15.16■□□□□ 0.02
PRPF19-204ENST00000539960 PTK7Q13308 1070 aa15.16■□□□□ 0.02
PRPF19-204ENST00000539960 MCTP1Q6DN14 999 aa15.16■□□□□ 0.02
PRPF19-204ENST00000539960 PDXDC2PQ6P474 469 aa15.16■□□□□ 0.02
PRPF19-204ENST00000539960 B3GNT9Q6UX72 402 aa15.16■□□□□ 0.02
PRPF19-204ENST00000539960 RDM1Q8NG50 284 aa15.16■□□□□ 0.02
PRPF19-204ENST00000539960 TNPO1Q92973 898 aaKnown RBP15.16■□□□□ 0.02
PRPF19-204ENST00000539960 ATP6V0A1Q93050 837 aa15.16■□□□□ 0.02
PRPF19-204ENST00000539960 PPP1R12CQ9BZL4 782 aa15.16■□□□□ 0.02
PRPF19-204ENST00000539960 ZNF302Q9NR11 478 aa15.16■□□□□ 0.02
PRPF19-204ENST00000539960 MAFBQ9Y5Q3 323 aaPredicted RBP15.16■□□□□ 0.02
PRPF19-204ENST00000539960 DOCK5Q9H7D0 1870 aa15.16■□□□□ 0.02
PRPF19-204ENST00000539960 POTEB3A0JP26 581 aa15.15■□□□□ 0.02
PRPF19-204ENST00000539960 TREHO43280 583 aa15.15■□□□□ 0.02
PRPF19-204ENST00000539960 CHMP2AO43633 222 aa15.15■□□□□ 0.02
PRPF19-204ENST00000539960 INSRRP14616 1297 aa15.15■□□□□ 0.02
PRPF19-204ENST00000539960 TRAPPC10P48553 1259 aa15.15■□□□□ 0.02
PRPF19-204ENST00000539960 JAK3P52333 1124 aa15.15■□□□□ 0.02
PRPF19-204ENST00000539960 ADAM17P78536 824 aa15.15■□□□□ 0.02
PRPF19-204ENST00000539960 BFSP2Q13515 415 aa15.15■□□□□ 0.02
PRPF19-204ENST00000539960 PLCB4Q15147 1175 aa15.15■□□□□ 0.02
PRPF19-204ENST00000539960 POTEBQ6S5H4 581 aa15.15■□□□□ 0.02
PRPF19-204ENST00000539960 POTEDQ86YR6 584 aa15.15■□□□□ 0.02
PRPF19-204ENST00000539960 CCDC60Q8IWA6 550 aaPredicted RBP15.15■□□□□ 0.02
PRPF19-204ENST00000539960 HSCBQ8IWL3 235 aa15.15■□□□□ 0.02
PRPF19-204ENST00000539960 SLFN12Q8IYM2 578 aa15.15■□□□□ 0.02
PRPF19-204ENST00000539960 TMEM199Q8N511 208 aa15.15■□□□□ 0.02
PRPF19-204ENST00000539960 RETREG2Q8NC44 543 aa15.15■□□□□ 0.02
PRPF19-204ENST00000539960 UBE2OQ9C0C9 1292 aaKnown RBP15.15■□□□□ 0.02
PRPF19-204ENST00000539960 UMODL1Q5DID0 1318 aa15.15■□□□□ 0.02
PRPF19-204ENST00000539960 RRN3P2A6NIE6 340 aa15.14■□□□□ 0.01
PRPF19-204ENST00000539960 PITPNM1O00562 1244 aa15.14■□□□□ 0.01
PRPF19-204ENST00000539960 ATP4AP20648 1035 aa15.14■□□□□ 0.01
PRPF19-204ENST00000539960 PDCP20941 246 aa15.14■□□□□ 0.01
PRPF19-204ENST00000539960 MCM7P33993 719 aa15.14■□□□□ 0.01
PRPF19-204ENST00000539960 TOB1P50616 345 aaPredicted RBP15.14■□□□□ 0.01
PRPF19-204ENST00000539960 FPGSQ05932 587 aa15.14■□□□□ 0.01
PRPF19-204ENST00000539960 PPFIA1Q13136 1202 aa15.14■□□□□ 0.01
PRPF19-204ENST00000539960 PPP2R5CQ13362 524 aa15.14■□□□□ 0.01
PRPF19-204ENST00000539960 ZNF174Q15697 407 aa15.14■□□□□ 0.01
PRPF19-204ENST00000539960 CALCRLQ16602 461 aa15.14■□□□□ 0.01
PRPF19-204ENST00000539960 MIER3Q7Z3K6 550 aa15.14■□□□□ 0.01
PRPF19-204ENST00000539960 SERINC5Q86VE9 423 aa15.14■□□□□ 0.01
PRPF19-204ENST00000539960 CAGE1Q8TC20 777 aa15.14■□□□□ 0.01
PRPF19-204ENST00000539960 LMBR1Q8WVP7 490 aa15.14■□□□□ 0.01
PRPF19-204ENST00000539960 DHX38Q92620 1227 aaKnown RBP15.14■□□□□ 0.01
PRPF19-204ENST00000539960 MTMR9Q96QG7 549 aa15.14■□□□□ 0.01
PRPF19-204ENST00000539960 GABBR1Q9UBS5 961 aa15.14■□□□□ 0.01
PRPF19-204ENST00000539960 VAV3Q9UKW4 847 aa15.14■□□□□ 0.01
PRPF19-204ENST00000539960 NOL7Q9UMY1 257 aaKnown RBP15.14■□□□□ 0.01
PRPF19-204ENST00000539960 PCDHA12Q9UN75 941 aa15.14■□□□□ 0.01
PRPF19-204ENST00000539960 TRPC6Q9Y210 931 aa15.14■□□□□ 0.01
PRPF19-204ENST00000539960 HBP1O60381 514 aa15.13■□□□□ 0.01
PRPF19-204ENST00000539960 NEMFO60524 1076 aa15.13■□□□□ 0.01
PRPF19-204ENST00000539960 CSF2RAP15509 400 aa15.13■□□□□ 0.01
PRPF19-204ENST00000539960 CCL23P55773 120 aa15.13■□□□□ 0.01
PRPF19-204ENST00000539960 ORC2Q13416 577 aaPredicted RBP15.13■□□□□ 0.01
PRPF19-204ENST00000539960 PPIGQ13427 754 aaKnown RBP eCLIP15.13■□□□□ 0.014e-7■■■□□ 15.6
PRPF19-204ENST00000539960 GRIK4Q16099 956 aa15.13■□□□□ 0.01
PRPF19-204ENST00000539960 TRIM71Q2Q1W2 868 aaKnown RBP15.13■□□□□ 0.01
PRPF19-204ENST00000539960 TTC38Q5R3I4 469 aa15.13■□□□□ 0.01
PRPF19-204ENST00000539960 MARCH8Q5T0T0 291 aa15.13■□□□□ 0.01
PRPF19-204ENST00000539960 CKAP2LQ8IYA6 745 aa15.13■□□□□ 0.01
PRPF19-204ENST00000539960 CCDC155Q8N6L0 562 aa15.13■□□□□ 0.01
PRPF19-204ENST00000539960 ATP8B4Q8TF62 1192 aa15.13■□□□□ 0.01
PRPF19-204ENST00000539960 WNT8AQ9H1J5 351 aa15.13■□□□□ 0.01
PRPF19-204ENST00000539960 TMEM60Q9H2L4 133 aa15.13■□□□□ 0.01
PRPF19-204ENST00000539960 FOXD4L1Q9NU39 408 aa15.13■□□□□ 0.01
PRPF19-204ENST00000539960 MBLAC1A4D2B0 266 aaPredicted RBP15.12■□□□□ 0.01
PRPF19-204ENST00000539960 EML1O00423 815 aa15.12■□□□□ 0.01
PRPF19-204ENST00000539960 IQCF3P0C7M6 154 aa15.12■□□□□ 0.01
PRPF19-204ENST00000539960 CKBP12277 381 aa15.12■□□□□ 0.01
PRPF19-204ENST00000539960 TXKP42681 527 aa15.12■□□□□ 0.01
PRPF19-204ENST00000539960 EPHB4P54760 987 aa15.12■□□□□ 0.01
PRPF19-204ENST00000539960 IGBP1P78318 339 aa15.12■□□□□ 0.01
PRPF19-204ENST00000539960 RBL2Q08999 1139 aa15.12■□□□□ 0.01
PRPF19-204ENST00000539960 ZNF484Q5JVG2 852 aa15.12■□□□□ 0.01
PRPF19-204ENST00000539960 C16orf59Q7L2K0 433 aa15.12■□□□□ 0.01
PRPF19-204ENST00000539960 BBXQ8WY36 941 aaPredicted RBP15.12■□□□□ 0.01
PRPF19-204ENST00000539960 WNT8BQ93098 351 aa15.12■□□□□ 0.01
PRPF19-204ENST00000539960 TTC12Q9H892 705 aaPredicted RBP15.12■□□□□ 0.01
PRPF19-204ENST00000539960 NRBP2Q9NSY0 501 aa15.12■□□□□ 0.01
PRPF19-204ENST00000539960 A0A1W2PPC1 479 aa15.11■□□□□ 0.01
PRPF19-204ENST00000539960 ZNF862O60290 1169 aa15.11■□□□□ 0.01
PRPF19-204ENST00000539960 SYT1P21579 422 aa15.11■□□□□ 0.01
PRPF19-204ENST00000539960 SPIRE1Q08AE8 756 aa15.11■□□□□ 0.01
PRPF19-204ENST00000539960 EPHA7Q15375 998 aa15.11■□□□□ 0.01
PRPF19-204ENST00000539960 UGCGQ16739 394 aa15.11■□□□□ 0.01
PRPF19-204ENST00000539960 RILPL1Q5EBL4 403 aa15.11■□□□□ 0.01
PRPF19-204ENST00000539960 TRMT1LQ7Z2T5 733 aaKnown RBP15.11■□□□□ 0.01
PRPF19-204ENST00000539960 RPUSD2Q8IZ73 545 aaKnown RBP15.11■□□□□ 0.01
PRPF19-204ENST00000539960 C4orf32Q8N8J7 132 aa15.11■□□□□ 0.01
PRPF19-204ENST00000539960 SCLYQ96I15 445 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms