RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 ANKRD20A12PQ8NF67 263 aa8.52□□□□□ -1.05
CCDC60-204ENST00000539847 IGDCC4Q8TDY8 1250 aa8.52□□□□□ -1.05
CCDC60-204ENST00000539847 PNKPQ96T60 521 aa8.52□□□□□ -1.05
CCDC60-204ENST00000539847 MYCBPQ99417 103 aaPredicted RBP8.52□□□□□ -1.05
CCDC60-204ENST00000539847 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.52□□□□□ -1.05
CCDC60-204ENST00000539847 EPC1Q9H2F5 836 aa8.52□□□□□ -1.05
CCDC60-204ENST00000539847 PAK6Q9NQU5 681 aaPredicted RBP8.52□□□□□ -1.05
CCDC60-204ENST00000539847 PICK1Q9NRD5 415 aa8.52□□□□□ -1.05
CCDC60-204ENST00000539847 DNAAF2Q9NVR5 837 aaKnown RBP8.52□□□□□ -1.05
CCDC60-204ENST00000539847 A0A1W2PQC6 194 aa8.51□□□□□ -1.05
CCDC60-204ENST00000539847 ANO9A1A5B4 782 aa8.51□□□□□ -1.05
CCDC60-204ENST00000539847 ZBTB43O43298 467 aa8.51□□□□□ -1.05
CCDC60-204ENST00000539847 ADCY3O60266 1144 aa8.51□□□□□ -1.05
CCDC60-204ENST00000539847 CTNND1O60716 968 aaKnown RBP8.51□□□□□ -1.05
CCDC60-204ENST00000539847 MYCP01106 439 aaPredicted RBP8.51□□□□□ -1.05
CCDC60-204ENST00000539847 LDHBP07195 334 aaKnown RBP8.51□□□□□ -1.05
CCDC60-204ENST00000539847 EPB41P11171 864 aaKnown RBP8.51□□□□□ -1.05
CCDC60-204ENST00000539847 PTPRAP18433 802 aa8.51□□□□□ -1.05
CCDC60-204ENST00000539847 BMP8BP34820 402 aa8.51□□□□□ -1.05
CCDC60-204ENST00000539847 ARHGAP25P42331 645 aa8.51□□□□□ -1.05
CCDC60-204ENST00000539847 VSNL1P62760 191 aa8.51□□□□□ -1.05
CCDC60-204ENST00000539847 KRT83P78385 493 aa8.51□□□□□ -1.05
CCDC60-204ENST00000539847 PPFIA1Q13136 1202 aa8.51□□□□□ -1.05
CCDC60-204ENST00000539847 LINC01559Q495D7 138 aa8.51□□□□□ -1.05
CCDC60-204ENST00000539847 ALS2CLQ60I27 953 aa8.51□□□□□ -1.05
CCDC60-204ENST00000539847 MCTP2Q6DN12 878 aa8.51□□□□□ -1.05
CCDC60-204ENST00000539847 APOA5Q6Q788 366 aa8.51□□□□□ -1.05
CCDC60-204ENST00000539847 ZNF572Q7Z3I7 529 aaPredicted RBP8.51□□□□□ -1.05
CCDC60-204ENST00000539847 CCDC91Q7Z6B0 441 aa8.51□□□□□ -1.05
CCDC60-204ENST00000539847 TADA2BQ86TJ2 420 aa8.51□□□□□ -1.05
CCDC60-204ENST00000539847 AMOTL1Q8IY63 956 aa8.51□□□□□ -1.05
CCDC60-204ENST00000539847 FAM177A1Q8N128 213 aaPredicted RBP8.51□□□□□ -1.05
CCDC60-204ENST00000539847 STK11IPQ8N1F8 1099 aa8.51□□□□□ -1.05
CCDC60-204ENST00000539847 SLC35F6Q8N357 371 aa8.51□□□□□ -1.05
CCDC60-204ENST00000539847 COG1Q8WTW3 980 aa8.51□□□□□ -1.05
CCDC60-204ENST00000539847 FOXJ1Q92949 421 aa8.51□□□□□ -1.05
CCDC60-204ENST00000539847 FERMT2Q96AC1 680 aa8.51□□□□□ -1.05
CCDC60-204ENST00000539847 NEUROD6Q96NK8 337 aa8.51□□□□□ -1.05
CCDC60-204ENST00000539847 MED15Q96RN5 788 aa8.51□□□□□ -1.05
CCDC60-204ENST00000539847 CNNM2Q9H8M5 875 aa8.51□□□□□ -1.05
CCDC60-204ENST00000539847 DENND2AQ9ULE3 1009 aa8.51□□□□□ -1.05
CCDC60-204ENST00000539847 NOD1Q9Y239 953 aa8.51□□□□□ -1.05
CCDC60-204ENST00000539847 AFG3L2Q9Y4W6 797 aa8.51□□□□□ -1.05
CCDC60-204ENST00000539847 GAKO14976 1311 aa8.51□□□□□ -1.05
CCDC60-204ENST00000539847 GOLGA8KD6RF30 607 aa8.5□□□□□ -1.05
CCDC60-204ENST00000539847 OPA1O60313 960 aa8.5□□□□□ -1.05
CCDC60-204ENST00000539847 SYF2O95926 243 aaKnown RBP8.5□□□□□ -1.05
CCDC60-204ENST00000539847 S1PR4O95977 384 aa8.5□□□□□ -1.05
CCDC60-204ENST00000539847 MMP1P03956 469 aa8.5□□□□□ -1.05
CCDC60-204ENST00000539847 INHAP05111 366 aa8.5□□□□□ -1.05
CCDC60-204ENST00000539847 CDC27P30260 824 aa8.5□□□□□ -1.05
CCDC60-204ENST00000539847 HOXA7P31268 230 aaPredicted RBP8.5□□□□□ -1.05
CCDC60-204ENST00000539847 GCLCP48506 637 aaPredicted RBP8.5□□□□□ -1.05
CCDC60-204ENST00000539847 FLT3LGP49771 235 aa8.5□□□□□ -1.05
CCDC60-204ENST00000539847 TIMM10P62072 90 aa8.5□□□□□ -1.05
CCDC60-204ENST00000539847 CDK17Q00537 523 aa8.5□□□□□ -1.05
CCDC60-204ENST00000539847 APBA1Q02410 837 aa8.5□□□□□ -1.05
CCDC60-204ENST00000539847 NFIAQ12857 509 aa8.5□□□□□ -1.05
CCDC60-204ENST00000539847 STIM1Q13586 685 aa8.5□□□□□ -1.05
CCDC60-204ENST00000539847 KARSQ15046 597 aaKnown RBP8.5□□□□□ -1.05
CCDC60-204ENST00000539847 FAM110CQ1W6H9 321 aa8.5□□□□□ -1.05
CCDC60-204ENST00000539847 C4orf48Q5BLP8 95 aa8.5□□□□□ -1.05
CCDC60-204ENST00000539847 SLC9C2Q5TAH2 1124 aa8.5□□□□□ -1.05
CCDC60-204ENST00000539847 CCDC70Q6NSX1 233 aa8.5□□□□□ -1.05
CCDC60-204ENST00000539847 CCNI2Q6ZMN8 369 aaPredicted RBP8.5□□□□□ -1.05
CCDC60-204ENST00000539847 B4GALNT4Q76KP1 1039 aa8.5□□□□□ -1.05
CCDC60-204ENST00000539847 TAS1R3Q7RTX0 852 aa8.5□□□□□ -1.05
CCDC60-204ENST00000539847 MMGT1Q8N4V1 131 aa8.5□□□□□ -1.05
CCDC60-204ENST00000539847 SMCR8Q8TEV9 937 aaPredicted RBP8.5□□□□□ -1.05
CCDC60-204ENST00000539847 STAG1Q8WVM7 1258 aa8.5□□□□□ -1.05
CCDC60-204ENST00000539847 COA7Q96BR5 231 aa8.5□□□□□ -1.05
CCDC60-204ENST00000539847 CLIC6Q96NY7 704 aa8.5□□□□□ -1.05
CCDC60-204ENST00000539847 TRERF1Q96PN7 1200 aa8.5□□□□□ -1.05
CCDC60-204ENST00000539847 PAGR1Q9BTK6 254 aa8.5□□□□□ -1.05
CCDC60-204ENST00000539847 IL21Q9HBE4 155 aa8.5□□□□□ -1.05
CCDC60-204ENST00000539847 SAMSN1Q9NSI8 373 aaKnown RBP8.5□□□□□ -1.05
CCDC60-204ENST00000539847 SERTAD1Q9UHV2 236 aa8.5□□□□□ -1.05
CCDC60-204ENST00000539847 RWDD2AQ9UIY3 292 aa8.5□□□□□ -1.05
CCDC60-204ENST00000539847 HPCAL4Q9UM19 191 aa8.5□□□□□ -1.05
CCDC60-204ENST00000539847 AGTPBP1Q9UPW5 1226 aa8.5□□□□□ -1.05
CCDC60-204ENST00000539847 EPN1Q9Y6I3 576 aaPredicted RBP8.5□□□□□ -1.05
CCDC60-204ENST00000539847 ZHX2Q9Y6X8 837 aa8.5□□□□□ -1.05
CCDC60-204ENST00000539847 EBAG9O00559 213 aa8.49□□□□□ -1.05
CCDC60-204ENST00000539847 TNPO2O14787 897 aaKnown RBP8.49□□□□□ -1.05
CCDC60-204ENST00000539847 POLR2DO15514 142 aaKnown RBP8.49□□□□□ -1.05
CCDC60-204ENST00000539847 ZEB2O60315 1214 aa8.49□□□□□ -1.05
CCDC60-204ENST00000539847 PRMT3O60678 531 aa8.49□□□□□ -1.05
CCDC60-204ENST00000539847 DEXIO95424 95 aa8.49□□□□□ -1.05
CCDC60-204ENST00000539847 ABL1P00519 1130 aa8.49□□□□□ -1.05
CCDC60-204ENST00000539847 CYP2C8P10632 490 aa8.49□□□□□ -1.05
CCDC60-204ENST00000539847 TNFRSF8P28908 595 aa8.49□□□□□ -1.05
CCDC60-204ENST00000539847 PRDX5P30044 214 aa8.49□□□□□ -1.05
CCDC60-204ENST00000539847 TOB1P50616 345 aaPredicted RBP8.49□□□□□ -1.05
CCDC60-204ENST00000539847 SKOR1P84550 965 aa8.49□□□□□ -1.05
CCDC60-204ENST00000539847 TCP10Q12799 353 aa8.49□□□□□ -1.05
CCDC60-204ENST00000539847 PABPC4Q13310 644 aaKnown RBP eCLIP8.49□□□□□ -1.05
CCDC60-204ENST00000539847 NNTQ13423 1086 aa8.49□□□□□ -1.05
CCDC60-204ENST00000539847 ISM2Q6H9L7 571 aa8.49□□□□□ -1.05
CCDC60-204ENST00000539847 CHST3Q7LGC8 479 aa8.49□□□□□ -1.05
CCDC60-204ENST00000539847 NECAB2Q7Z6G3 386 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms