RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 C1QTNF1Q9BXJ1 281 aa17.44■□□□□ 0.38
UBE3B-211ENST00000539843 FTHL17Q9BXU8 183 aa17.44■□□□□ 0.38
UBE3B-211ENST00000539843 FAM49AQ9H0Q0 323 aaPredicted RBP17.44■□□□□ 0.38
UBE3B-211ENST00000539843 CHD9Q3L8U1 2897 aa17.44■□□□□ 0.38
UBE3B-211ENST00000539843 MBLAC1A4D2B0 266 aaPredicted RBP17.43■□□□□ 0.38
UBE3B-211ENST00000539843 BACH1O14867 736 aa17.43■□□□□ 0.38
UBE3B-211ENST00000539843 SREBF1P36956 1147 aa17.43■□□□□ 0.38
UBE3B-211ENST00000539843 STAT5BP51692 787 aa17.43■□□□□ 0.38
UBE3B-211ENST00000539843 ACTR2P61160 394 aa17.43■□□□□ 0.38
UBE3B-211ENST00000539843 MRPS6P82932 125 aaKnown RBP17.43■□□□□ 0.38
UBE3B-211ENST00000539843 MKRN4PQ13434 485 aaPredicted RBP17.43■□□□□ 0.38
UBE3B-211ENST00000539843 GPM6BQ13491 265 aa17.43■□□□□ 0.38
UBE3B-211ENST00000539843 BLOC1S2Q6QNY1 142 aa17.43■□□□□ 0.38
UBE3B-211ENST00000539843 RUFY4Q6ZNE9 571 aa17.43■□□□□ 0.38
UBE3B-211ENST00000539843 PLPPR4Q7Z2D5 763 aa17.43■□□□□ 0.38
UBE3B-211ENST00000539843 TMEM192Q8IY95 271 aa17.43■□□□□ 0.38
UBE3B-211ENST00000539843 MRPL38Q96DV4 380 aaKnown RBP17.43■□□□□ 0.38
UBE3B-211ENST00000539843 C6orf50Q9HD87 102 aa17.43■□□□□ 0.38
UBE3B-211ENST00000539843 BRPF3Q9ULD4 1205 aa17.43■□□□□ 0.38
UBE3B-211ENST00000539843 CDY2AQ9Y6F7 541 aa17.43■□□□□ 0.38
UBE3B-211ENST00000539843 COL4A4P53420 1690 aaPredicted RBP17.42■□□□□ 0.38
UBE3B-211ENST00000539843 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.42■□□□□ 0.38
UBE3B-211ENST00000539843 STXBP3O00186 592 aa17.42■□□□□ 0.38
UBE3B-211ENST00000539843 REC8O95072 547 aa17.42■□□□□ 0.38
UBE3B-211ENST00000539843 CHRNA1P02708 482 aa17.42■□□□□ 0.38
UBE3B-211ENST00000539843 INSRRP14616 1297 aa17.42■□□□□ 0.38
UBE3B-211ENST00000539843 PSMA5P28066 241 aa17.42■□□□□ 0.38
UBE3B-211ENST00000539843 GNA11P29992 359 aa17.42■□□□□ 0.38
UBE3B-211ENST00000539843 SETQ01105 290 aaPredicted RBP17.42■□□□□ 0.38
UBE3B-211ENST00000539843 FAM43BQ6ZT52 329 aaPredicted RBP17.42■□□□□ 0.38
UBE3B-211ENST00000539843 NIPA1Q7RTP0 329 aa17.42■□□□□ 0.38
UBE3B-211ENST00000539843 PGBD1Q96JS3 809 aa17.42■□□□□ 0.38
UBE3B-211ENST00000539843 UBE2ZQ9H832 354 aaPredicted RBP17.42■□□□□ 0.38
UBE3B-211ENST00000539843 AGO4Q9HCK5 861 aaKnown RBP17.42■□□□□ 0.38
UBE3B-211ENST00000539843 RNF216Q9NWF9 866 aaPredicted RBP17.42■□□□□ 0.38
UBE3B-211ENST00000539843 TELO2Q9Y4R8 837 aa17.42■□□□□ 0.38
UBE3B-211ENST00000539843 TRPV2Q9Y5S1 764 aa17.42■□□□□ 0.38
UBE3B-211ENST00000539843 SQORQ9Y6N5 450 aa17.42■□□□□ 0.38
UBE3B-211ENST00000539843 VCANP13611 3396 aa17.42■□□□□ 0.38
UBE3B-211ENST00000539843 PTPRSQ13332 1948 aa17.41■□□□□ 0.38
UBE3B-211ENST00000539843 PRUNE2Q8WUY3 3088 aa17.41■□□□□ 0.38
UBE3B-211ENST00000539843 POTEB3A0JP26 581 aa17.41■□□□□ 0.38
UBE3B-211ENST00000539843 H3BNC9 293 aa17.41■□□□□ 0.38
UBE3B-211ENST00000539843 RB1P06400 928 aa17.41■□□□□ 0.38
UBE3B-211ENST00000539843 SCG2P13521 617 aa17.41■□□□□ 0.38
UBE3B-211ENST00000539843 CTNNB1P35222 781 aa17.41■□□□□ 0.38
UBE3B-211ENST00000539843 MGAT3Q09327 533 aa17.41■□□□□ 0.38
UBE3B-211ENST00000539843 COL9A3Q14050 684 aaPredicted RBP17.41■□□□□ 0.38
UBE3B-211ENST00000539843 LPIN1Q14693 890 aa17.41■□□□□ 0.38
UBE3B-211ENST00000539843 PUS10Q3MIT2 529 aaKnown RBP17.41■□□□□ 0.38
UBE3B-211ENST00000539843 ADCK5Q3MIX3 580 aa17.41■□□□□ 0.38
UBE3B-211ENST00000539843 FBXO47Q5MNV8 452 aa17.41■□□□□ 0.38
UBE3B-211ENST00000539843 ODR4Q5SWX8 454 aa17.41■□□□□ 0.38
UBE3B-211ENST00000539843 POTEBQ6S5H4 581 aa17.41■□□□□ 0.38
UBE3B-211ENST00000539843 PLA2G4DQ86XP0 818 aa17.41■□□□□ 0.38
UBE3B-211ENST00000539843 RASEFQ8IZ41 740 aa17.41■□□□□ 0.38
UBE3B-211ENST00000539843 REXO1Q8N1G1 1221 aaKnown RBP17.41■□□□□ 0.38
UBE3B-211ENST00000539843 NME8Q8N427 588 aa17.41■□□□□ 0.38
UBE3B-211ENST00000539843 CCDC148Q8NFR7 591 aa17.41■□□□□ 0.38
UBE3B-211ENST00000539843 BICD2Q8TD16 824 aa17.41■□□□□ 0.38
UBE3B-211ENST00000539843 JAKMIP1Q96N16 626 aaKnown RBP17.41■□□□□ 0.38
UBE3B-211ENST00000539843 C11orf84Q9BUA3 381 aaPredicted RBP17.41■□□□□ 0.38
UBE3B-211ENST00000539843 FAM50BQ9Y247 325 aa17.41■□□□□ 0.38
UBE3B-211ENST00000539843 MICAL3Q7RTP6 2002 aa17.41■□□□□ 0.38
UBE3B-211ENST00000539843 SIP14410 1827 aa17.4■□□□□ 0.38
UBE3B-211ENST00000539843 COL4A6Q14031 1691 aa17.4■□□□□ 0.38
UBE3B-211ENST00000539843 ESYT2A0FGR8 921 aa17.4■□□□□ 0.38
UBE3B-211ENST00000539843 NCK2O43639 380 aa17.4■□□□□ 0.38
UBE3B-211ENST00000539843 HBP1O60381 514 aa17.4■□□□□ 0.38
UBE3B-211ENST00000539843 STAG3L1P0CL83 205 aa17.4■□□□□ 0.38
UBE3B-211ENST00000539843 PAK2Q13177 524 aa17.4■□□□□ 0.38
UBE3B-211ENST00000539843 BTG3Q14201 252 aaPredicted RBP17.4■□□□□ 0.38
UBE3B-211ENST00000539843 PLCB4Q15147 1175 aa17.4■□□□□ 0.38
UBE3B-211ENST00000539843 PFKFB3Q16875 520 aaPredicted RBP17.4■□□□□ 0.38
UBE3B-211ENST00000539843 JAKMIP3Q5VZ66 844 aa17.4■□□□□ 0.38
UBE3B-211ENST00000539843 MIS18BP1Q6P0N0 1132 aa17.4■□□□□ 0.38
UBE3B-211ENST00000539843 Q6ZUG5 572 aa17.4■□□□□ 0.38
UBE3B-211ENST00000539843 BANK1Q8NDB2 785 aa17.4■□□□□ 0.38
UBE3B-211ENST00000539843 CCDC136Q96JN2 1154 aa17.4■□□□□ 0.38
UBE3B-211ENST00000539843 NECAB3Q96P71 396 aaPredicted RBP17.4■□□□□ 0.38
UBE3B-211ENST00000539843 PCDHA2Q9Y5H9 948 aa17.4■□□□□ 0.38
UBE3B-211ENST00000539843 ADGRA3Q8IWK6 1321 aa17.4■□□□□ 0.38
UBE3B-211ENST00000539843 DOCK5Q9H7D0 1870 aa17.39■□□□□ 0.38
UBE3B-211ENST00000539843 KAT6AQ92794 2004 aa17.39■□□□□ 0.37
UBE3B-211ENST00000539843 SMIM35A0A1B0GVV1 85 aa17.39■□□□□ 0.37
UBE3B-211ENST00000539843 DDX39AO00148 427 aaKnown RBP17.39■□□□□ 0.37
UBE3B-211ENST00000539843 MEIS1O00470 390 aa17.39■□□□□ 0.37
UBE3B-211ENST00000539843 ARP10275 920 aa17.39■□□□□ 0.37
UBE3B-211ENST00000539843 KCNA5P22460 613 aa17.39■□□□□ 0.37
UBE3B-211ENST00000539843 CDC27P30260 824 aa17.39■□□□□ 0.37
UBE3B-211ENST00000539843 FUT2Q10981 343 aa17.39■□□□□ 0.37
UBE3B-211ENST00000539843 MARCH8Q5T0T0 291 aa17.39■□□□□ 0.37
UBE3B-211ENST00000539843 TYW1BQ6NUM6 668 aa17.39■□□□□ 0.37
UBE3B-211ENST00000539843 CKAP2LQ8IYA6 745 aa17.39■□□□□ 0.37
UBE3B-211ENST00000539843 CYP2W1Q8TAV3 490 aa17.39■□□□□ 0.37
UBE3B-211ENST00000539843 BRF1Q92994 677 aa17.39■□□□□ 0.37
UBE3B-211ENST00000539843 PPP2R3CQ969Q6 453 aa17.39■□□□□ 0.37
UBE3B-211ENST00000539843 LMAN2LQ9H0V9 348 aa17.39■□□□□ 0.37
UBE3B-211ENST00000539843 NSUN3Q9H649 340 aaKnown RBP17.39■□□□□ 0.37
UBE3B-211ENST00000539843 ZNF302Q9NR11 478 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms