RNA–Protein interactions for RNA: ENST00000539589.5

PACSIN3-211, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PACSIN3, Length 2,009 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-211ENST00000539589 PGM5Q15124 567 aa22.46■■□□□ 1.19
PACSIN3-211ENST00000539589 NCAPH2Q6IBW4 605 aa22.46■■□□□ 1.19
PACSIN3-211ENST00000539589 GPBP1Q86WP2 473 aa22.46■■□□□ 1.19
PACSIN3-211ENST00000539589 MYOCDQ8IZQ8 938 aa22.46■■□□□ 1.19
PACSIN3-211ENST00000539589 ANKRD7Q92527 254 aa22.46■■□□□ 1.19
PACSIN3-211ENST00000539589 ERO1AQ96HE7 468 aa22.46■■□□□ 1.19
PACSIN3-211ENST00000539589 TSG101Q99816 390 aa22.46■■□□□ 1.19
PACSIN3-211ENST00000539589 NUP58Q9BVL2 599 aa22.46■■□□□ 1.19
PACSIN3-211ENST00000539589 A1CFQ9NQ94 594 aaKnown RBP22.46■■□□□ 1.19
PACSIN3-211ENST00000539589 PXMP2Q9NR77 195 aa22.46■■□□□ 1.19
PACSIN3-211ENST00000539589 ZNF215Q9UL58 517 aaPredicted RBP22.46■■□□□ 1.19
PACSIN3-211ENST00000539589 LUC7L2Q9Y383 392 aaKnown RBP22.46■■□□□ 1.19
PACSIN3-211ENST00000539589 KIAA1217Q5T5P2 1943 aa22.46■■□□□ 1.19
PACSIN3-211ENST00000539589 RNF225M0QZC1 329 aaPredicted RBP22.45■■□□□ 1.18
PACSIN3-211ENST00000539589 CNMDO75829 334 aa22.45■■□□□ 1.18
PACSIN3-211ENST00000539589 RPA1P27694 616 aa22.45■■□□□ 1.18
PACSIN3-211ENST00000539589 NCBP1Q09161 790 aaKnown RBP22.45■■□□□ 1.18
PACSIN3-211ENST00000539589 TKFCQ3LXA3 575 aa22.45■■□□□ 1.18
PACSIN3-211ENST00000539589 FAM26FQ5R3K3 315 aa22.45■■□□□ 1.18
PACSIN3-211ENST00000539589 PCNX4Q63HM2 1172 aa22.45■■□□□ 1.18
PACSIN3-211ENST00000539589 CATSPER3Q86XQ3 398 aa22.45■■□□□ 1.18
PACSIN3-211ENST00000539589 RMDN3Q96TC7 470 aa22.45■■□□□ 1.18
PACSIN3-211ENST00000539589 PDCD2LQ9BRP1 358 aa22.45■■□□□ 1.18
PACSIN3-211ENST00000539589 ACAD9Q9H845 621 aa22.45■■□□□ 1.18
PACSIN3-211ENST00000539589 CAPN11Q9UMQ6 739 aa22.45■■□□□ 1.18
PACSIN3-211ENST00000539589 RABGAP1Q9Y3P9 1069 aa22.45■■□□□ 1.18
PACSIN3-211ENST00000539589 TTC26A0AVF1 554 aa22.45■■□□□ 1.18
PACSIN3-211ENST00000539589 EML1O00423 815 aa22.45■■□□□ 1.18
PACSIN3-211ENST00000539589 GNG11P61952 73 aa22.45■■□□□ 1.18
PACSIN3-211ENST00000539589 HERVK_113P62684 666 aa22.45■■□□□ 1.18
PACSIN3-211ENST00000539589 TSR1Q2NL82 804 aaKnown RBP22.45■■□□□ 1.18
PACSIN3-211ENST00000539589 OTOP1Q7RTM1 612 aa22.45■■□□□ 1.18
PACSIN3-211ENST00000539589 RETREG2Q8NC44 543 aa22.45■■□□□ 1.18
PACSIN3-211ENST00000539589 OR8K1Q8NGG5 319 aa22.45■■□□□ 1.18
PACSIN3-211ENST00000539589 ZNF526Q8TF50 670 aaPredicted RBP22.45■■□□□ 1.18
PACSIN3-211ENST00000539589 WDR11Q9BZH6 1224 aa22.45■■□□□ 1.18
PACSIN3-211ENST00000539589 R3HDMLQ9H3Y0 253 aa22.45■■□□□ 1.18
PACSIN3-211ENST00000539589 CYP39A1Q9NYL5 469 aa22.45■■□□□ 1.18
PACSIN3-211ENST00000539589 UBIAD1Q9Y5Z9 338 aa22.45■■□□□ 1.18
PACSIN3-211ENST00000539589 IRX3P78415 501 aaPredicted RBP22.44■■□□□ 1.18
PACSIN3-211ENST00000539589 FKBP15Q5T1M5 1219 aa22.44■■□□□ 1.18
PACSIN3-211ENST00000539589 GBA2Q9HCG7 927 aaPredicted RBP22.44■■□□□ 1.18
PACSIN3-211ENST00000539589 DNM3Q9UQ16 869 aa22.44■■□□□ 1.18
PACSIN3-211ENST00000539589 POTEFA5A3E0 1075 aa22.43■■□□□ 1.18
PACSIN3-211ENST00000539589 UNCXA6NJT0 531 aa22.43■■□□□ 1.18
PACSIN3-211ENST00000539589 SPATA31C1P0DKV0 1188 aa22.43■■□□□ 1.18
PACSIN3-211ENST00000539589 CYP11B2P19099 503 aa22.43■■□□□ 1.18
PACSIN3-211ENST00000539589 SLC12A3P55017 1021 aa22.43■■□□□ 1.18
PACSIN3-211ENST00000539589 LRRC41Q15345 812 aa22.43■■□□□ 1.18
PACSIN3-211ENST00000539589 MIIPQ5JXC2 388 aa22.43■■□□□ 1.18
PACSIN3-211ENST00000539589 POTEGQ6S5H5 508 aa22.43■■□□□ 1.18
PACSIN3-211ENST00000539589 MRPL44Q9H9J2 332 aaKnown RBP22.43■■□□□ 1.18
PACSIN3-211ENST00000539589 CELF2O95319 508 aaKnown RBP22.43■■□□□ 1.18
PACSIN3-211ENST00000539589 KRT18P05783 430 aaKnown RBP22.43■■□□□ 1.18
PACSIN3-211ENST00000539589 CASQ1P31415 396 aa22.43■■□□□ 1.18
PACSIN3-211ENST00000539589 ERVK-24P63145 666 aa22.43■■□□□ 1.18
PACSIN3-211ENST00000539589 SETQ01105 290 aaPredicted RBP22.43■■□□□ 1.18
PACSIN3-211ENST00000539589 LRCH2Q5VUJ6 765 aa22.43■■□□□ 1.18
PACSIN3-211ENST00000539589 FASTKD5Q7L8L6 764 aaKnown RBP22.43■■□□□ 1.18
PACSIN3-211ENST00000539589 RIOX2Q8IUF8 465 aa22.43■■□□□ 1.18
PACSIN3-211ENST00000539589 DNAJC7Q99615 494 aa22.43■■□□□ 1.18
PACSIN3-211ENST00000539589 KCNH7Q9NS40 1196 aa22.43■■□□□ 1.18
PACSIN3-211ENST00000539589 TRPM7Q96QT4 1865 aa22.42■■□□□ 1.18
PACSIN3-211ENST00000539589 KIF20AO95235 890 aa22.42■■□□□ 1.18
PACSIN3-211ENST00000539589 TRIM21P19474 475 aaKnown RBP22.42■■□□□ 1.18
PACSIN3-211ENST00000539589 SNAPC2Q13487 334 aa22.42■■□□□ 1.18
PACSIN3-211ENST00000539589 ERGIC2Q96RQ1 377 aa22.42■■□□□ 1.18
PACSIN3-211ENST00000539589 ZNF577Q9BSK1 485 aa22.42■■□□□ 1.18
PACSIN3-211ENST00000539589 SPATC1LQ9H0A9 340 aa22.42■■□□□ 1.18
PACSIN3-211ENST00000539589 TXNRD2Q9NNW7 524 aa22.42■■□□□ 1.18
PACSIN3-211ENST00000539589 BCRP11274 1271 aa22.41■■□□□ 1.18
PACSIN3-211ENST00000539589 MYCLP12524 364 aaPredicted RBP22.41■■□□□ 1.18
PACSIN3-211ENST00000539589 VWA3BQ502W6 1294 aa22.41■■□□□ 1.18
PACSIN3-211ENST00000539589 HERC4Q5GLZ8 1057 aaPredicted RBP22.41■■□□□ 1.18
PACSIN3-211ENST00000539589 ARHGEF16Q5VV41 709 aa22.41■■□□□ 1.18
PACSIN3-211ENST00000539589 B3GNT9Q6UX72 402 aa22.41■■□□□ 1.18
PACSIN3-211ENST00000539589 NIPA1Q7RTP0 329 aa22.41■■□□□ 1.18
PACSIN3-211ENST00000539589 KCTD17Q8N5Z5 321 aa22.41■■□□□ 1.18
PACSIN3-211ENST00000539589 IQCDQ96DY2 449 aa22.41■■□□□ 1.18
PACSIN3-211ENST00000539589 MS4A4AQ96JQ5 239 aa22.41■■□□□ 1.18
PACSIN3-211ENST00000539589 PAGR1Q9BTK6 254 aa22.41■■□□□ 1.18
PACSIN3-211ENST00000539589 JADE2Q9NQC1 790 aa22.41■■□□□ 1.18
PACSIN3-211ENST00000539589 RBPJLQ9UBG7 517 aa22.41■■□□□ 1.18
PACSIN3-211ENST00000539589 FKBP1BP68106 108 aa22.41■■□□□ 1.18
PACSIN3-211ENST00000539589 PPP2R5CQ13362 524 aa22.41■■□□□ 1.18
PACSIN3-211ENST00000539589 CST9Q5W186 159 aa22.41■■□□□ 1.18
PACSIN3-211ENST00000539589 SYT2Q8N9I0 419 aaPredicted RBP22.41■■□□□ 1.18
PACSIN3-211ENST00000539589 GLIS3Q8NEA6 775 aa22.41■■□□□ 1.18
PACSIN3-211ENST00000539589 CHST13Q8NET6 341 aa22.41■■□□□ 1.18
PACSIN3-211ENST00000539589 PCMTD1Q96MG8 357 aaPredicted RBP22.41■■□□□ 1.18
PACSIN3-211ENST00000539589 POLR3CQ9BUI4 534 aaPredicted RBP22.41■■□□□ 1.18
PACSIN3-211ENST00000539589 FRMD3A2A2Y4 597 aa22.4■■□□□ 1.18
PACSIN3-211ENST00000539589 IPO5O00410 1097 aaKnown RBP22.4■■□□□ 1.18
PACSIN3-211ENST00000539589 URI1O94763 535 aaPredicted RBP22.4■■□□□ 1.18
PACSIN3-211ENST00000539589 ITGBL1O95965 494 aaPredicted RBP22.4■■□□□ 1.18
PACSIN3-211ENST00000539589 FKBP3Q00688 224 aaKnown RBP22.4■■□□□ 1.18
PACSIN3-211ENST00000539589 MKRN3Q13064 507 aaKnown RBP22.4■■□□□ 1.18
PACSIN3-211ENST00000539589 MAN2A1Q16706 1144 aa22.4■■□□□ 1.18
PACSIN3-211ENST00000539589 ARSHQ5FYA8 562 aa22.4■■□□□ 1.18
PACSIN3-211ENST00000539589 TTYH3Q9C0H2 523 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms