RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 DCDC2CA8MYV0 355 aa22.23■■□□□ 1.15
TMEM260-203ENST00000539559 POTECB2RU33 542 aa22.23■■□□□ 1.15
TMEM260-203ENST00000539559 HSPA9P38646 679 aaKnown RBP22.23■■□□□ 1.15
TMEM260-203ENST00000539559 DDR1Q08345 913 aa22.23■■□□□ 1.15
TMEM260-203ENST00000539559 KCNH2Q12809 1159 aa22.23■■□□□ 1.15
TMEM260-203ENST00000539559 SF3B2Q13435 895 aaKnown RBP22.23■■□□□ 1.15
TMEM260-203ENST00000539559 ADAM9Q13443 819 aa22.23■■□□□ 1.15
TMEM260-203ENST00000539559 POTEBQ6S5H4 581 aa22.23■■□□□ 1.15
TMEM260-203ENST00000539559 CD302Q8IX05 232 aa22.23■■□□□ 1.15
TMEM260-203ENST00000539559 SCFD1Q8WVM8 642 aa22.23■■□□□ 1.15
TMEM260-203ENST00000539559 RAB34Q9BZG1 259 aa22.23■■□□□ 1.15
TMEM260-203ENST00000539559 GANQ9H2C0 597 aa22.23■■□□□ 1.15
TMEM260-203ENST00000539559 DDX25Q9UHL0 483 aaKnown RBP22.23■■□□□ 1.15
TMEM260-203ENST00000539559 POLRMTO00411 1230 aaKnown RBP22.23■■□□□ 1.15
TMEM260-203ENST00000539559 SLC16A2P36021 539 aa22.23■■□□□ 1.15
TMEM260-203ENST00000539559 CASP5P51878 434 aa22.23■■□□□ 1.15
TMEM260-203ENST00000539559 QPCTQ16769 361 aa22.23■■□□□ 1.15
TMEM260-203ENST00000539559 TTBK2Q6IQ55 1244 aa22.23■■□□□ 1.15
TMEM260-203ENST00000539559 C16orf86Q6ZW13 317 aa22.23■■□□□ 1.15
TMEM260-203ENST00000539559 UBLCP1Q8WVY7 318 aaPredicted RBP22.23■■□□□ 1.15
TMEM260-203ENST00000539559 PPP1R11O60927 126 aaPredicted RBP22.22■■□□□ 1.15
TMEM260-203ENST00000539559 KIF4AO95239 1232 aa22.22■■□□□ 1.15
TMEM260-203ENST00000539559 STAT3P40763 770 aa22.22■■□□□ 1.15
TMEM260-203ENST00000539559 PSMD2Q13200 908 aa22.22■■□□□ 1.15
TMEM260-203ENST00000539559 CHADLQ6NUI6 762 aa22.22■■□□□ 1.15
TMEM260-203ENST00000539559 WDR66Q8TBY9 1149 aa22.22■■□□□ 1.15
TMEM260-203ENST00000539559 LUC7LQ9NQ29 371 aaKnown RBP22.22■■□□□ 1.15
TMEM260-203ENST00000539559 AMACRQ9UHK6 382 aa22.22■■□□□ 1.15
TMEM260-203ENST00000539559 PLSCR1O15162 318 aa22.22■■□□□ 1.15
TMEM260-203ENST00000539559 CTNNA1P35221 906 aaKnown RBP22.22■■□□□ 1.15
TMEM260-203ENST00000539559 ZNF804AQ7Z570 1209 aa22.22■■□□□ 1.15
TMEM260-203ENST00000539559 GPBP1Q86WP2 473 aa22.22■■□□□ 1.15
TMEM260-203ENST00000539559 CEP89Q96ST8 783 aa22.22■■□□□ 1.15
TMEM260-203ENST00000539559 JPH2Q9BR39 696 aaPredicted RBP22.22■■□□□ 1.15
TMEM260-203ENST00000539559 CELF4Q9BZC1 486 aaKnown RBP22.22■■□□□ 1.15
TMEM260-203ENST00000539559 ISCUQ9H1K1 167 aa22.22■■□□□ 1.15
TMEM260-203ENST00000539559 BCAS3Q9H6U6 928 aa22.22■■□□□ 1.15
TMEM260-203ENST00000539559 GOLGA6L10A6NI86 522 aa22.21■■□□□ 1.15
TMEM260-203ENST00000539559 HMGB1P1B2RPK0 211 aaPredicted RBP22.21■■□□□ 1.15
TMEM260-203ENST00000539559 SART1O43290 800 aaKnown RBP22.21■■□□□ 1.15
TMEM260-203ENST00000539559 ATP2C2O75185 946 aa22.21■■□□□ 1.15
TMEM260-203ENST00000539559 BBOX1O75936 387 aa22.21■■□□□ 1.15
TMEM260-203ENST00000539559 MYBP10242 640 aa22.21■■□□□ 1.15
TMEM260-203ENST00000539559 ZNF844Q08AG5 666 aa22.21■■□□□ 1.15
TMEM260-203ENST00000539559 PDIA5Q14554 519 aa22.21■■□□□ 1.15
TMEM260-203ENST00000539559 SYN2Q92777 582 aaPredicted RBP22.21■■□□□ 1.15
TMEM260-203ENST00000539559 TRIM31Q9BZY9 425 aa22.21■■□□□ 1.15
TMEM260-203ENST00000539559 RIOX1Q9H6W3 641 aa22.21■■□□□ 1.15
TMEM260-203ENST00000539559 YY1AP1Q9H869 796 aa22.21■■□□□ 1.15
TMEM260-203ENST00000539559 CNOT8Q9UFF9 292 aaKnown RBP22.21■■□□□ 1.15
TMEM260-203ENST00000539559 TMEM59LQ9UK28 342 aa22.21■■□□□ 1.15
TMEM260-203ENST00000539559 FBXL5Q9UKA1 691 aa22.21■■□□□ 1.15
TMEM260-203ENST00000539559 AJAP1Q9UKB5 411 aaPredicted RBP22.21■■□□□ 1.15
TMEM260-203ENST00000539559 H0YGN5 161 aa22.21■■□□□ 1.15
TMEM260-203ENST00000539559 DAPK3O43293 454 aa22.21■■□□□ 1.15
TMEM260-203ENST00000539559 FSBPO95073 299 aa22.21■■□□□ 1.15
TMEM260-203ENST00000539559 SLURP2P0DP57 97 aa22.21■■□□□ 1.15
TMEM260-203ENST00000539559 GJB7Q6PEY0 223 aa22.21■■□□□ 1.15
TMEM260-203ENST00000539559 C15orf52Q6ZUT6 534 aaKnown RBP22.21■■□□□ 1.15
TMEM260-203ENST00000539559 METTL13Q8N6R0 699 aa22.21■■□□□ 1.15
TMEM260-203ENST00000539559 CYFIP2Q96F07 1278 aa22.21■■□□□ 1.15
TMEM260-203ENST00000539559 CABS1Q96KC9 395 aa22.21■■□□□ 1.15
TMEM260-203ENST00000539559 SPAG5Q96R06 1193 aa22.21■■□□□ 1.15
TMEM260-203ENST00000539559 NCAPGQ9BPX3 1015 aa22.21■■□□□ 1.15
TMEM260-203ENST00000539559 PCDHA2Q9Y5H9 948 aa22.21■■□□□ 1.15
TMEM260-203ENST00000539559 NFS1Q9Y697 457 aa22.21■■□□□ 1.15
TMEM260-203ENST00000539559 GCOM1H8Y6P7 765 aaPredicted RBP22.2■■□□□ 1.14
TMEM260-203ENST00000539559 APBA3O96018 575 aa22.2■■□□□ 1.14
TMEM260-203ENST00000539559 MYZAPP0CAP1 466 aa22.2■■□□□ 1.14
TMEM260-203ENST00000539559 GPSM2P81274 684 aa22.2■■□□□ 1.14
TMEM260-203ENST00000539559 ODF2Q5BJF6 829 aa22.2■■□□□ 1.14
TMEM260-203ENST00000539559 SWT1Q5T5J6 900 aaKnown RBP22.2■■□□□ 1.14
TMEM260-203ENST00000539559 EMILIN3Q9NT22 766 aa22.2■■□□□ 1.14
TMEM260-203ENST00000539559 AIPL1Q9NZN9 384 aa22.2■■□□□ 1.14
TMEM260-203ENST00000539559 PCDHA12Q9UN75 941 aa22.2■■□□□ 1.14
TMEM260-203ENST00000539559 FAM107AO95990 144 aa22.2■■□□□ 1.14
TMEM260-203ENST00000539559 PLA2G4BP0C869 781 aa22.2■■□□□ 1.14
TMEM260-203ENST00000539559 HOXA10P31260 410 aaPredicted RBP22.2■■□□□ 1.14
TMEM260-203ENST00000539559 PICALMQ13492 652 aa22.2■■□□□ 1.14
TMEM260-203ENST00000539559 IRF2BP2Q7Z5L9 587 aa22.2■■□□□ 1.14
TMEM260-203ENST00000539559 NUCKS1Q9H1E3 243 aaKnown RBP22.2■■□□□ 1.14
TMEM260-203ENST00000539559 DPH5Q9H2P9 285 aa22.2■■□□□ 1.14
TMEM260-203ENST00000539559 KCTD10Q9H3F6 313 aa22.2■■□□□ 1.14
TMEM260-203ENST00000539559 PLCB1Q9NQ66 1216 aa22.2■■□□□ 1.14
TMEM260-203ENST00000539559 NOC2LQ9Y3T9 749 aaKnown RBP22.2■■□□□ 1.14
TMEM260-203ENST00000539559 NAV1Q8NEY1 1877 aa22.2■■□□□ 1.14
TMEM260-203ENST00000539559 A6NNZ2 444 aa22.19■■□□□ 1.14
TMEM260-203ENST00000539559 NR2F2P24468 414 aa22.19■■□□□ 1.14
TMEM260-203ENST00000539559 PPP4CP60510 307 aa22.19■■□□□ 1.14
TMEM260-203ENST00000539559 TUBB8Q3ZCM7 444 aa22.19■■□□□ 1.14
TMEM260-203ENST00000539559 DCAF17Q5H9S7 520 aaPredicted RBP22.19■■□□□ 1.14
TMEM260-203ENST00000539559 ADAT2Q7Z6V5 191 aaKnown RBP22.19■■□□□ 1.14
TMEM260-203ENST00000539559 CCDC13Q8IYE1 715 aa22.19■■□□□ 1.14
TMEM260-203ENST00000539559 RBM46Q8TBY0 533 aaKnown RBP22.19■■□□□ 1.14
TMEM260-203ENST00000539559 DDX60LQ5H9U9 1706 aaKnown RBP22.19■■□□□ 1.14
TMEM260-203ENST00000539559 ESYT2A0FGR8 921 aa22.19■■□□□ 1.14
TMEM260-203ENST00000539559 KRT18P05783 430 aaKnown RBP22.19■■□□□ 1.14
TMEM260-203ENST00000539559 ATP2B4P23634 1241 aa22.19■■□□□ 1.14
TMEM260-203ENST00000539559 NOVA2Q9UNW9 492 aaKnown RBP22.19■■□□□ 1.14
TMEM260-203ENST00000539559 MAST2Q6P0Q8 1798 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms