RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 ZMYND12Q9H0C1 365 aa25.31■■□□□ 1.64
SCARB1-206ENST00000539320 C6orf50Q9HD87 102 aa25.31■■□□□ 1.64
SCARB1-206ENST00000539320 COL4A4P53420 1690 aaPredicted RBP25.31■■□□□ 1.64
SCARB1-206ENST00000539320 MBLAC1A4D2B0 266 aaPredicted RBP25.3■■□□□ 1.64
SCARB1-206ENST00000539320 POU3F3P20264 500 aaPredicted RBP25.3■■□□□ 1.64
SCARB1-206ENST00000539320 MCTP2Q6DN12 878 aa25.3■■□□□ 1.64
SCARB1-206ENST00000539320 RSPH3Q86UC2 560 aa25.3■■□□□ 1.64
SCARB1-206ENST00000539320 REXO1Q8N1G1 1221 aaKnown RBP25.3■■□□□ 1.64
SCARB1-206ENST00000539320 RNF26Q9BY78 433 aaPredicted RBP25.3■■□□□ 1.64
SCARB1-206ENST00000539320 OSBPL7Q9BZF2 842 aa25.3■■□□□ 1.64
SCARB1-206ENST00000539320 MTCH2Q9Y6C9 303 aa25.3■■□□□ 1.64
SCARB1-206ENST00000539320 NTRK3Q16288 839 aa25.29■■□□□ 1.64
SCARB1-206ENST00000539320 PLA2G4DQ86XP0 818 aa25.29■■□□□ 1.64
SCARB1-206ENST00000539320 CCDC148Q8NFR7 591 aa25.29■■□□□ 1.64
SCARB1-206ENST00000539320 SYMPKQ92797 1274 aaKnown RBP25.29■■□□□ 1.64
SCARB1-206ENST00000539320 APBB2Q92870 758 aa25.29■■□□□ 1.64
SCARB1-206ENST00000539320 TRPC6Q9Y210 931 aa25.29■■□□□ 1.64
SCARB1-206ENST00000539320 RRN3P2A6NIE6 340 aa25.28■■□□□ 1.64
SCARB1-206ENST00000539320 IFNAR1P17181 557 aa25.28■■□□□ 1.64
SCARB1-206ENST00000539320 GNA11P29992 359 aa25.28■■□□□ 1.64
SCARB1-206ENST00000539320 EVCP57679 992 aa25.28■■□□□ 1.64
SCARB1-206ENST00000539320 IGBP1P78318 339 aa25.28■■□□□ 1.64
SCARB1-206ENST00000539320 GRB10Q13322 594 aa25.28■■□□□ 1.64
SCARB1-206ENST00000539320 MARCH8Q5T0T0 291 aa25.28■■□□□ 1.64
SCARB1-206ENST00000539320 RUFY3Q7L099 469 aa25.28■■□□□ 1.64
SCARB1-206ENST00000539320 ATXN2LQ8WWM7 1075 aaKnown RBP25.28■■□□□ 1.64
SCARB1-206ENST00000539320 CRYGNQ8WXF5 182 aa25.28■■□□□ 1.64
SCARB1-206ENST00000539320 TGS1Q96RS0 853 aaKnown RBP25.28■■□□□ 1.64
SCARB1-206ENST00000539320 SLC26A6Q9BXS9 759 aa25.28■■□□□ 1.64
SCARB1-206ENST00000539320 IFIH1Q9BYX4 1025 aaKnown RBP25.28■■□□□ 1.64
SCARB1-206ENST00000539320 ZSWIM6Q9HCJ5 1215 aa25.28■■□□□ 1.64
SCARB1-206ENST00000539320 SIP14410 1827 aa25.28■■□□□ 1.64
SCARB1-206ENST00000539320 LINC01553A4QN01 128 aa25.27■■□□□ 1.64
SCARB1-206ENST00000539320 FAM86B1E9PN63 330 aa25.27■■□□□ 1.64
SCARB1-206ENST00000539320 DDX39AO00148 427 aaKnown RBP25.27■■□□□ 1.64
SCARB1-206ENST00000539320 PPFIA3O75145 1194 aa25.27■■□□□ 1.64
SCARB1-206ENST00000539320 CHRNA1P02708 482 aa25.27■■□□□ 1.64
SCARB1-206ENST00000539320 CYP3A4P08684 503 aa25.27■■□□□ 1.64
SCARB1-206ENST00000539320 FAM86B2P0C5J1 330 aa25.27■■□□□ 1.64
SCARB1-206ENST00000539320 GHRP10912 638 aa25.27■■□□□ 1.64
SCARB1-206ENST00000539320 INSRRP14616 1297 aa25.27■■□□□ 1.64
SCARB1-206ENST00000539320 PDIA3P30101 505 aaKnown RBP25.27■■□□□ 1.64
SCARB1-206ENST00000539320 CCT2P78371 535 aaKnown RBP25.27■■□□□ 1.64
SCARB1-206ENST00000539320 MGAT3Q09327 533 aa25.27■■□□□ 1.64
SCARB1-206ENST00000539320 PLCB4Q15147 1175 aa25.27■■□□□ 1.64
SCARB1-206ENST00000539320 PLPPR4Q7Z2D5 763 aa25.27■■□□□ 1.64
SCARB1-206ENST00000539320 TNPO1Q92973 898 aaKnown RBP25.27■■□□□ 1.64
SCARB1-206ENST00000539320 TSPYL2Q9H2G4 693 aaPredicted RBP25.27■■□□□ 1.64
SCARB1-206ENST00000539320 NCOA5Q9HCD5 579 aaKnown RBP25.27■■□□□ 1.64
SCARB1-206ENST00000539320 INSL6Q9Y581 213 aa25.27■■□□□ 1.64
SCARB1-206ENST00000539320 IGLV3-22A0A075B6J6 115 aa25.26■■□□□ 1.63
SCARB1-206ENST00000539320 ADAMTS3O15072 1205 aa25.26■■□□□ 1.63
SCARB1-206ENST00000539320 RPLP2P05387 115 aaKnown RBP25.26■■□□□ 1.63
SCARB1-206ENST00000539320 STAT5BP51692 787 aa25.26■■□□□ 1.63
SCARB1-206ENST00000539320 ERVK-21P61565 698 aa25.26■■□□□ 1.63
SCARB1-206ENST00000539320 HTRA4P83105 476 aaPredicted RBP25.26■■□□□ 1.63
SCARB1-206ENST00000539320 SETQ01105 290 aaPredicted RBP25.26■■□□□ 1.63
SCARB1-206ENST00000539320 TOB2Q14106 344 aaPredicted RBP25.26■■□□□ 1.63
SCARB1-206ENST00000539320 BICD2Q8TD16 824 aa25.26■■□□□ 1.63
SCARB1-206ENST00000539320 GDPD5Q8WTR4 605 aa25.26■■□□□ 1.63
SCARB1-206ENST00000539320 DNAJB3Q8WWF6 145 aa25.26■■□□□ 1.63
SCARB1-206ENST00000539320 MTUS1Q9ULD2 1270 aa25.26■■□□□ 1.63
SCARB1-206ENST00000539320 CYP46A1Q9Y6A2 500 aa25.26■■□□□ 1.63
SCARB1-206ENST00000539320 LOC101059915A0A1B0GWI6 518 aaPredicted RBP25.25■■□□□ 1.63
SCARB1-206ENST00000539320 LPXNO60711 386 aa25.25■■□□□ 1.63
SCARB1-206ENST00000539320 ATG7O95352 703 aa25.25■■□□□ 1.63
SCARB1-206ENST00000539320 CCNE2O96020 404 aa25.25■■□□□ 1.63
SCARB1-206ENST00000539320 KRT40Q6A162 431 aa25.25■■□□□ 1.63
SCARB1-206ENST00000539320 RASGRP4Q8TDF6 673 aa25.25■■□□□ 1.63
SCARB1-206ENST00000539320 TM6SF1Q9BZW5 370 aa25.25■■□□□ 1.63
SCARB1-206ENST00000539320 CDY2AQ9Y6F7 541 aa25.25■■□□□ 1.63
SCARB1-206ENST00000539320 NCOR1O75376 2440 aa25.24■■□□□ 1.63
SCARB1-206ENST00000539320 BACH1O14867 736 aa25.24■■□□□ 1.63
SCARB1-206ENST00000539320 SLC26A2P50443 739 aa25.24■■□□□ 1.63
SCARB1-206ENST00000539320 MRPS5P82675 430 aaKnown RBP25.24■■□□□ 1.63
SCARB1-206ENST00000539320 MRPS6P82932 125 aaKnown RBP25.24■■□□□ 1.63
SCARB1-206ENST00000539320 LPIN1Q14693 890 aa25.24■■□□□ 1.63
SCARB1-206ENST00000539320 SKIV2LQ15477 1246 aaKnown RBP25.24■■□□□ 1.63
SCARB1-206ENST00000539320 FAM160B1Q5W0V3 765 aa25.24■■□□□ 1.63
SCARB1-206ENST00000539320 SP7Q8TDD2 431 aaPredicted RBP25.24■■□□□ 1.63
SCARB1-206ENST00000539320 ZBTB10Q96DT7 871 aa25.24■■□□□ 1.63
SCARB1-206ENST00000539320 FAM49AQ9H0Q0 323 aaPredicted RBP25.24■■□□□ 1.63
SCARB1-206ENST00000539320 VPS54Q9P1Q0 977 aa25.24■■□□□ 1.63
SCARB1-206ENST00000539320 TRANK1O15050 2925 aa25.24■■□□□ 1.63
SCARB1-206ENST00000539320 SPTBN5Q9NRC6 3674 aaKnown RBP25.24■■□□□ 1.63
SCARB1-206ENST00000539320 COL4A6Q14031 1691 aa25.23■■□□□ 1.63
SCARB1-206ENST00000539320 IGKV6D-21A0A0A0MT36 114 aa25.23■■□□□ 1.63
SCARB1-206ENST00000539320 IPO5O00410 1097 aaKnown RBP25.23■■□□□ 1.63
SCARB1-206ENST00000539320 FBXO47Q5MNV8 452 aa25.23■■□□□ 1.63
SCARB1-206ENST00000539320 ABHD15Q6UXT9 468 aa25.23■■□□□ 1.63
SCARB1-206ENST00000539320 TRIM22Q8IYM9 498 aa25.23■■□□□ 1.63
SCARB1-206ENST00000539320 TRAPPC12Q8WVT3 735 aa25.23■■□□□ 1.63
SCARB1-206ENST00000539320 TOP1MTQ969P6 601 aa25.23■■□□□ 1.63
SCARB1-206ENST00000539320 ASB2Q96Q27 587 aa25.23■■□□□ 1.63
SCARB1-206ENST00000539320 YME1L1Q96TA2 773 aa25.23■■□□□ 1.63
SCARB1-206ENST00000539320 UPF3BQ9BZI7 483 aaKnown RBP25.23■■□□□ 1.63
SCARB1-206ENST00000539320 BRWD1Q9NSI6 2320 aa25.22■■□□□ 1.63
SCARB1-206ENST00000539320 POTEB3A0JP26 581 aa25.22■■□□□ 1.63
SCARB1-206ENST00000539320 DHX15O43143 795 aaKnown RBP25.22■■□□□ 1.63
SCARB1-206ENST00000539320 MIS18BP1Q6P0N0 1132 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms