RNA–Protein interactions for RNA: ENST00000539204.5

YBX3-207, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-207ENST00000539204 GPKOWQ92917 476 aaPredicted RBP eCLIP13.99□□□□□ -0.17
YBX3-207ENST00000539204 ZFP91Q96JP5 570 aaPredicted RBP13.99□□□□□ -0.17
YBX3-207ENST00000539204 APOL5Q9BWW9 433 aa13.99□□□□□ -0.17
YBX3-207ENST00000539204 AMNQ9BXJ7 453 aa13.99□□□□□ -0.17
YBX3-207ENST00000539204 MYO10Q9HD67 2058 aa13.99□□□□□ -0.17
YBX3-207ENST00000539204 CD52P31358 61 aa13.98□□□□□ -0.17
YBX3-207ENST00000539204 SYCE2Q6PIF2 218 aa13.98□□□□□ -0.17
YBX3-207ENST00000539204 METTL7BQ6UX53 244 aa13.98□□□□□ -0.17
YBX3-207ENST00000539204 RUFY4Q6ZNE9 571 aa13.98□□□□□ -0.17
YBX3-207ENST00000539204 MFSD6Q6ZSS7 791 aa13.98□□□□□ -0.17
YBX3-207ENST00000539204 GPR20Q99678 358 aa13.98□□□□□ -0.17
YBX3-207ENST00000539204 JMJD4Q9H9V9 463 aa13.98□□□□□ -0.17
YBX3-207ENST00000539204 TMEM260Q9NX78 707 aa13.98□□□□□ -0.17
YBX3-207ENST00000539204 LRFN2Q9ULH4 789 aa13.98□□□□□ -0.17
YBX3-207ENST00000539204 TTC41PQ6P2S7 1318 aa13.97□□□□□ -0.17
YBX3-207ENST00000539204 LMNAP02545 664 aaKnown RBP13.97□□□□□ -0.17
YBX3-207ENST00000539204 HOXA13P31271 388 aaPredicted RBP13.97□□□□□ -0.17
YBX3-207ENST00000539204 GHRHRQ02643 423 aa13.97□□□□□ -0.17
YBX3-207ENST00000539204 KCNC3Q14003 757 aa13.97□□□□□ -0.17
YBX3-207ENST00000539204 GNPTABQ3T906 1256 aa13.97□□□□□ -0.17
YBX3-207ENST00000539204 CES5AQ6NT32 575 aa13.97□□□□□ -0.17
YBX3-207ENST00000539204 LLGL2Q6P1M3 1020 aa13.97□□□□□ -0.17
YBX3-207ENST00000539204 TRIM50Q86XT4 487 aa13.97□□□□□ -0.17
YBX3-207ENST00000539204 SAMD3Q8N6K7 520 aa13.97□□□□□ -0.17
YBX3-207ENST00000539204 PNMA1Q8ND90 353 aa13.97□□□□□ -0.17
YBX3-207ENST00000539204 FLCNQ8NFG4 579 aa13.97□□□□□ -0.17
YBX3-207ENST00000539204 RASGRP4Q8TDF6 673 aa13.97□□□□□ -0.17
YBX3-207ENST00000539204 DNAJB3Q8WWF6 145 aa13.97□□□□□ -0.17
YBX3-207ENST00000539204 LINC01599Q8WXQ3 324 aa13.97□□□□□ -0.17
YBX3-207ENST00000539204 CNTNAP3BQ96NU0 1288 aa13.97□□□□□ -0.17
YBX3-207ENST00000539204 NECTIN4Q96NY8 510 aa13.97□□□□□ -0.17
YBX3-207ENST00000539204 CNTNAP3Q9BZ76 1288 aa13.97□□□□□ -0.17
YBX3-207ENST00000539204 SEMA4AQ9H3S1 761 aa13.97□□□□□ -0.17
YBX3-207ENST00000539204 AGO3Q9H9G7 860 aaKnown RBP13.97□□□□□ -0.17
YBX3-207ENST00000539204 CDY2AQ9Y6F7 541 aa13.97□□□□□ -0.17
YBX3-207ENST00000539204 DMXL1Q9Y485 3027 aa13.96□□□□□ -0.17
YBX3-207ENST00000539204 CACNA1GO43497 2377 aa13.96□□□□□ -0.17
YBX3-207ENST00000539204 C2CD4DB7Z1M9 353 aa13.96□□□□□ -0.17
YBX3-207ENST00000539204 OPLAHO14841 1288 aa13.96□□□□□ -0.17
YBX3-207ENST00000539204 FGF18O76093 207 aa13.96□□□□□ -0.17
YBX3-207ENST00000539204 PCP11498 1178 aaKnown RBP13.96□□□□□ -0.17
YBX3-207ENST00000539204 SCG2P13521 617 aa13.96□□□□□ -0.17
YBX3-207ENST00000539204 ANGPT1Q15389 498 aa13.96□□□□□ -0.17
YBX3-207ENST00000539204 ASPRV1Q53RT3 343 aa13.96□□□□□ -0.17
YBX3-207ENST00000539204 CCDC178Q5BJE1 867 aa13.96□□□□□ -0.17
YBX3-207ENST00000539204 IER5Q5VY09 327 aa13.96□□□□□ -0.17
YBX3-207ENST00000539204 KIAA2013Q8IYS2 634 aa13.96□□□□□ -0.17
YBX3-207ENST00000539204 IL31RAQ8NI17 732 aa13.96□□□□□ -0.17
YBX3-207ENST00000539204 ESR2Q92731 530 aa13.96□□□□□ -0.17
YBX3-207ENST00000539204 ZKSCAN3Q9BRR0 538 aa13.96□□□□□ -0.17
YBX3-207ENST00000539204 SMOC2Q9H3U7 446 aa13.96□□□□□ -0.17
YBX3-207ENST00000539204 DCTPP1Q9H773 170 aa13.96□□□□□ -0.17
YBX3-207ENST00000539204 KAT14Q9H8E8 782 aa13.96□□□□□ -0.17
YBX3-207ENST00000539204 PUF60Q9UHX1 559 aaKnown RBP13.96□□□□□ -0.17
YBX3-207ENST00000539204 PCDHB7Q9Y5E2 793 aa13.96□□□□□ -0.17
YBX3-207ENST00000539204 PCDHA1Q9Y5I3 950 aa13.96□□□□□ -0.17
YBX3-207ENST00000539204 SQORQ9Y6N5 450 aa13.96□□□□□ -0.17
YBX3-207ENST00000539204 TPRP12270 2363 aaKnown RBP13.96□□□□□ -0.18
YBX3-207ENST00000539204 NCOR2Q9Y618 2525 aa13.96□□□□□ -0.18
YBX3-207ENST00000539204 ZFHX4Q86UP3 3567 aa13.95□□□□□ -0.18
YBX3-207ENST00000539204 SPATA31C2B4DYI2 1134 aa13.95□□□□□ -0.18
YBX3-207ENST00000539204 CCER2I3L3R5 266 aa13.95□□□□□ -0.18
YBX3-207ENST00000539204 FSCN2O14926 492 aa13.95□□□□□ -0.18
YBX3-207ENST00000539204 RPLP2P05387 115 aaKnown RBP13.95□□□□□ -0.18
YBX3-207ENST00000539204 PARP1P09874 1014 aaKnown RBP13.95□□□□□ -0.18
YBX3-207ENST00000539204 GATMP50440 423 aa13.95□□□□□ -0.18
YBX3-207ENST00000539204 ITIH3Q06033 890 aa13.95□□□□□ -0.18
YBX3-207ENST00000539204 TPRNQ4KMQ1 711 aa13.95□□□□□ -0.18
YBX3-207ENST00000539204 THNSL1Q8IYQ7 743 aa13.95□□□□□ -0.18
YBX3-207ENST00000539204 MIER1Q8N108 512 aa13.95□□□□□ -0.18
YBX3-207ENST00000539204 ADAM7Q9H2U9 754 aa13.95□□□□□ -0.18
YBX3-207ENST00000539204 HELLSQ9NRZ9 838 aa13.95□□□□□ -0.18
YBX3-207ENST00000539204 LIMD1Q9UGP4 676 aa13.95□□□□□ -0.18
YBX3-207ENST00000539204 PADI3Q9ULW8 664 aa13.95□□□□□ -0.18
YBX3-207ENST00000539204 TRIM6-TRIM34B2RNG4 842 aa13.94□□□□□ -0.18
YBX3-207ENST00000539204 GCOM1H8Y6P7 765 aaPredicted RBP13.94□□□□□ -0.18
YBX3-207ENST00000539204 PI15O43692 258 aa13.94□□□□□ -0.18
YBX3-207ENST00000539204 STAM2O75886 525 aa13.94□□□□□ -0.18
YBX3-207ENST00000539204 ASGR2P07307 311 aa13.94□□□□□ -0.18
YBX3-207ENST00000539204 POLR2MP0CAP2 368 aa13.94□□□□□ -0.18
YBX3-207ENST00000539204 AOC1P19801 751 aa13.94□□□□□ -0.18
YBX3-207ENST00000539204 IBSPP21815 317 aaPredicted RBP13.94□□□□□ -0.18
YBX3-207ENST00000539204 HAND2P61296 217 aa13.94□□□□□ -0.18
YBX3-207ENST00000539204 MRPS6P82932 125 aaKnown RBP13.94□□□□□ -0.18
YBX3-207ENST00000539204 SP4Q02446 784 aa13.94□□□□□ -0.18
YBX3-207ENST00000539204 PPFIA1Q13136 1202 aa13.94□□□□□ -0.18
YBX3-207ENST00000539204 PLPP4Q5VZY2 271 aa13.94□□□□□ -0.18
YBX3-207ENST00000539204 FCHSD1Q86WN1 690 aa13.94□□□□□ -0.18
YBX3-207ENST00000539204 IQCA1Q86XH1 822 aa13.94□□□□□ -0.18
YBX3-207ENST00000539204 CCDC105Q8IYK2 499 aa13.94□□□□□ -0.18
YBX3-207ENST00000539204 PLCD3Q8N3E9 789 aa13.94□□□□□ -0.18
YBX3-207ENST00000539204 DTWD2Q8NBA8 298 aa13.94□□□□□ -0.18
YBX3-207ENST00000539204 PI4K2BQ8TCG2 481 aa13.94□□□□□ -0.18
YBX3-207ENST00000539204 RTP3Q9BQQ7 232 aa13.94□□□□□ -0.18
YBX3-207ENST00000539204 RNF41Q9H4P4 317 aaPredicted RBP13.94□□□□□ -0.18
YBX3-207ENST00000539204 POMKQ9H5K3 350 aa13.94□□□□□ -0.18
YBX3-207ENST00000539204 NGRNQ9NPE2 291 aaKnown RBP13.94□□□□□ -0.18
YBX3-207ENST00000539204 RNF216Q9NWF9 866 aaPredicted RBP13.94□□□□□ -0.18
YBX3-207ENST00000539204 RTEL1Q9NZ71 1219 aa13.94□□□□□ -0.18
YBX3-207ENST00000539204 TUBE1Q9UJT0 475 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms