RNA–Protein interactions for RNA: ENST00000539176.1

KLHL42-202, Transcript of kelch like family member 42, humanhuman

TSL 3

Gene KLHL42, Length 1,894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42-202ENST00000539176 PDE4DQ08499 809 aa28.29■■■□□ 2.12
KLHL42-202ENST00000539176 KRT31Q15323 416 aa28.29■■■□□ 2.12
KLHL42-202ENST00000539176 TCP11X2Q5H9J9 407 aa28.29■■■□□ 2.12
KLHL42-202ENST00000539176 CATSPER3Q86XQ3 398 aa28.29■■■□□ 2.12
KLHL42-202ENST00000539176 DNERQ8NFT8 737 aa28.29■■■□□ 2.12
KLHL42-202ENST00000539176 RAD54LQ92698 747 aa28.29■■■□□ 2.12
KLHL42-202ENST00000539176 EIF2AK1Q9BQI3 630 aaKnown RBP28.29■■■□□ 2.12
KLHL42-202ENST00000539176 MROH8Q9H579 483 aa28.29■■■□□ 2.12
KLHL42-202ENST00000539176 MANSC4A6NHS7 340 aaPredicted RBP28.28■■■□□ 2.12
KLHL42-202ENST00000539176 USP27XA6NNY8 438 aa28.28■■■□□ 2.12
KLHL42-202ENST00000539176 STX10O60499 249 aa28.28■■■□□ 2.12
KLHL42-202ENST00000539176 EEF1GP26641 437 aaKnown RBP28.28■■■□□ 2.12
KLHL42-202ENST00000539176 GCLCP48506 637 aaPredicted RBP28.28■■■□□ 2.12
KLHL42-202ENST00000539176 ERMNQ8TAM6 284 aa28.28■■■□□ 2.12
KLHL42-202ENST00000539176 INPP4AQ96PE3 977 aaPredicted RBP28.28■■■□□ 2.12
KLHL42-202ENST00000539176 RIT2Q99578 217 aa28.28■■■□□ 2.12
KLHL42-202ENST00000539176 STK24Q9Y6E0 443 aa28.28■■■□□ 2.12
KLHL42-202ENST00000539176 DOCK5Q9H7D0 1870 aa28.28■■■□□ 2.12
KLHL42-202ENST00000539176 FAM155AB1AL88 458 aaPredicted RBP28.27■■■□□ 2.12
KLHL42-202ENST00000539176 KCNJ18B7U540 433 aa28.27■■■□□ 2.12
KLHL42-202ENST00000539176 E9PMD0 336 aa28.27■■■□□ 2.12
KLHL42-202ENST00000539176 GRM1Q13255 1194 aa28.27■■■□□ 2.12
KLHL42-202ENST00000539176 KCNJ12Q14500 433 aa28.27■■■□□ 2.12
KLHL42-202ENST00000539176 KCTD2Q14681 263 aa28.27■■■□□ 2.12
KLHL42-202ENST00000539176 UNC13DQ70J99 1090 aa28.27■■■□□ 2.12
KLHL42-202ENST00000539176 SHCBP1Q8NEM2 672 aa28.27■■■□□ 2.12
KLHL42-202ENST00000539176 FGD4Q96M96 766 aa28.27■■■□□ 2.12
KLHL42-202ENST00000539176 CEP135Q66GS9 1140 aa28.27■■■□□ 2.12
KLHL42-202ENST00000539176 HAUS3Q68CZ6 603 aa28.27■■■□□ 2.12
KLHL42-202ENST00000539176 B3GNT9Q6UX72 402 aa28.27■■■□□ 2.12
KLHL42-202ENST00000539176 TC2NQ8N9U0 490 aa28.27■■■□□ 2.12
KLHL42-202ENST00000539176 PANX2Q96RD6 677 aa28.27■■■□□ 2.12
KLHL42-202ENST00000539176 MORF4L1Q9UBU8 362 aa28.27■■■□□ 2.12
KLHL42-202ENST00000539176 PLXNB2O15031 1838 aa28.27■■■□□ 2.12
KLHL42-202ENST00000539176 FCER1AP12319 257 aa28.26■■■□□ 2.11
KLHL42-202ENST00000539176 TRIM14Q14142 442 aa28.26■■■□□ 2.11
KLHL42-202ENST00000539176 CTTNQ14247 550 aaKnown RBP28.26■■■□□ 2.11
KLHL42-202ENST00000539176 DHX30Q7L2E3 1194 aaKnown RBP eCLIP28.26■■■□□ 2.11
KLHL42-202ENST00000539176 PPFIBP1Q86W92 1011 aa28.26■■■□□ 2.11
KLHL42-202ENST00000539176 DYDC2Q96IM9 177 aa28.26■■■□□ 2.11
KLHL42-202ENST00000539176 IWS1Q96ST2 819 aa28.26■■■□□ 2.11
KLHL42-202ENST00000539176 ZIC5Q96T25 663 aa28.26■■■□□ 2.11
KLHL42-202ENST00000539176 BAG1Q99933 345 aaPredicted RBP28.26■■■□□ 2.11
KLHL42-202ENST00000539176 TMEM88BA6NKF7 163 aa28.25■■■□□ 2.11
KLHL42-202ENST00000539176 CCNE1P24864 410 aa28.25■■■□□ 2.11
KLHL42-202ENST00000539176 RPA1P27694 616 aa28.25■■■□□ 2.11
KLHL42-202ENST00000539176 COPB1P53618 953 aaKnown RBP28.25■■■□□ 2.11
KLHL42-202ENST00000539176 TTI2Q6NXR4 508 aa28.25■■■□□ 2.11
KLHL42-202ENST00000539176 NLRX1Q86UT6 975 aa28.25■■■□□ 2.11
KLHL42-202ENST00000539176 TMEM139Q8IV31 216 aa28.25■■■□□ 2.11
KLHL42-202ENST00000539176 GPRASP2Q96D09 838 aa28.25■■■□□ 2.11
KLHL42-202ENST00000539176 PPP1R13BQ96KQ4 1090 aa28.25■■■□□ 2.11
KLHL42-202ENST00000539176 BCAS3Q9H6U6 928 aa28.25■■■□□ 2.11
KLHL42-202ENST00000539176 CPA4Q9UI42 421 aa28.25■■■□□ 2.11
KLHL42-202ENST00000539176 DNAJC25-GNG10A0A024R161 153 aa28.25■■■□□ 2.11
KLHL42-202ENST00000539176 AKR1B15C9JRZ8 316 aaPredicted RBP28.25■■■□□ 2.11
KLHL42-202ENST00000539176 N4BP3O15049 544 aa28.25■■■□□ 2.11
KLHL42-202ENST00000539176 TEX33O43247 280 aa28.25■■■□□ 2.11
KLHL42-202ENST00000539176 ECM2O94769 699 aaPredicted RBP28.25■■■□□ 2.11
KLHL42-202ENST00000539176 PSMC6P62333 389 aa28.25■■■□□ 2.11
KLHL42-202ENST00000539176 CCNA1P78396 465 aa28.25■■■□□ 2.11
KLHL42-202ENST00000539176 STXBP2Q15833 593 aa28.25■■■□□ 2.11
KLHL42-202ENST00000539176 TRIM47Q96LD4 638 aa28.25■■■□□ 2.11
KLHL42-202ENST00000539176 MAPK8IP1Q9UQF2 711 aa28.25■■■□□ 2.11
KLHL42-202ENST00000539176 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP28.25■■■□□ 2.11
KLHL42-202ENST00000539176 LRRC37A2A6NM11 1700 aa28.25■■■□□ 2.11
KLHL42-202ENST00000539176 SORBS3O60504 671 aa28.24■■■□□ 2.11
KLHL42-202ENST00000539176 TOMM70O94826 608 aa28.24■■■□□ 2.11
KLHL42-202ENST00000539176 SSBP05455 408 aaKnown RBP eCLIP28.24■■■□□ 2.11
KLHL42-202ENST00000539176 TPM1P09493 284 aa28.24■■■□□ 2.11
KLHL42-202ENST00000539176 PAXIP1Q6ZW49 1069 aaPredicted RBP28.24■■■□□ 2.11
KLHL42-202ENST00000539176 FAM114A1Q8IWE2 563 aa28.24■■■□□ 2.11
KLHL42-202ENST00000539176 CCDC51Q96ER9 411 aa28.24■■■□□ 2.11
KLHL42-202ENST00000539176 NAA15Q9BXJ9 866 aaKnown RBP28.24■■■□□ 2.11
KLHL42-202ENST00000539176 TRMT1Q9NXH9 659 aaKnown RBP28.24■■■□□ 2.11
KLHL42-202ENST00000539176 MCM3APO60318 1980 aa28.24■■■□□ 2.11
KLHL42-202ENST00000539176 MYMKA6NI61 221 aa28.23■■■□□ 2.11
KLHL42-202ENST00000539176 CNGA4Q8IV77 575 aa28.23■■■□□ 2.11
KLHL42-202ENST00000539176 P2RX5Q93086 422 aa28.23■■■□□ 2.11
KLHL42-202ENST00000539176 POLR3CQ9BUI4 534 aaPredicted RBP28.23■■■□□ 2.11
KLHL42-202ENST00000539176 ZSCAN12O43309 604 aa28.23■■■□□ 2.11
KLHL42-202ENST00000539176 PSMD2Q13200 908 aa28.23■■■□□ 2.11
KLHL42-202ENST00000539176 TAF1CQ15572 869 aaPredicted RBP28.23■■■□□ 2.11
KLHL42-202ENST00000539176 MIER3Q7Z3K6 550 aa28.23■■■□□ 2.11
KLHL42-202ENST00000539176 TPH2Q8IWU9 490 aa28.23■■■□□ 2.11
KLHL42-202ENST00000539176 HSD17B14Q9BPX1 270 aa28.23■■■□□ 2.11
KLHL42-202ENST00000539176 MAGEC2Q9UBF1 373 aaPredicted RBP28.23■■■□□ 2.11
KLHL42-202ENST00000539176 SLITRK3O94933 977 aa28.22■■■□□ 2.11
KLHL42-202ENST00000539176 EDNRBP24530 442 aa28.22■■■□□ 2.11
KLHL42-202ENST00000539176 FOXR2Q6PJQ5 311 aa28.22■■■□□ 2.11
KLHL42-202ENST00000539176 SEPT14Q6ZU15 432 aa28.22■■■□□ 2.11
KLHL42-202ENST00000539176 EEPD1Q7L9B9 569 aa28.22■■■□□ 2.11
KLHL42-202ENST00000539176 IFNL1Q8IU54 200 aa28.22■■■□□ 2.11
KLHL42-202ENST00000539176 TBC1D22BQ9NU19 505 aa28.22■■■□□ 2.11
KLHL42-202ENST00000539176 WRAP73Q9P2S5 460 aaPredicted RBP28.22■■■□□ 2.11
KLHL42-202ENST00000539176 TELO2Q9Y4R8 837 aa28.22■■■□□ 2.11
KLHL42-202ENST00000539176 GOLGA6L9A6NEM1 432 aa28.21■■■□□ 2.11
KLHL42-202ENST00000539176 EIF3JO75822 258 aaKnown RBP28.21■■■□□ 2.11
KLHL42-202ENST00000539176 PLA2G4BP0C869 781 aa28.21■■■□□ 2.11
KLHL42-202ENST00000539176 KCNA2P16389 499 aa28.21■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms