RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 ZNF277Q9NRM2 450 aaPredicted RBP1.4□□□□□ -2.19
HIF1A-204ENST00000539097 TOPORSQ9NS56 1045 aaPredicted RBP1.4□□□□□ -2.19
HIF1A-204ENST00000539097 RAD18Q9NS91 495 aa1.4□□□□□ -2.19
HIF1A-204ENST00000539097 HOMER2Q9NSB8 354 aa1.4□□□□□ -2.19
HIF1A-204ENST00000539097 KCNG1Q9UIX4 513 aa1.4□□□□□ -2.19
HIF1A-204ENST00000539097 AKT3Q9Y243 479 aa1.4□□□□□ -2.19
HIF1A-204ENST00000539097 SIT1Q9Y3P8 196 aa1.4□□□□□ -2.19
HIF1A-204ENST00000539097 MEFVO15553 781 aaPredicted RBP1.4□□□□□ -2.19
HIF1A-204ENST00000539097 TSPAN6O43657 245 aa1.4□□□□□ -2.19
HIF1A-204ENST00000539097 CBX7O95931 251 aa1.4□□□□□ -2.19
HIF1A-204ENST00000539097 MT-CO1P00395 513 aa1.4□□□□□ -2.19
HIF1A-204ENST00000539097 F13BP05160 661 aa1.4□□□□□ -2.19
HIF1A-204ENST00000539097 CD3EP07766 207 aa1.4□□□□□ -2.19
HIF1A-204ENST00000539097 PYGMP11217 842 aa1.4□□□□□ -2.19
HIF1A-204ENST00000539097 PDE6AP16499 860 aa1.4□□□□□ -2.19
HIF1A-204ENST00000539097 CNGA1P29973 690 aa1.4□□□□□ -2.19
HIF1A-204ENST00000539097 GNALP38405 381 aa1.4□□□□□ -2.19
HIF1A-204ENST00000539097 DACT2Q5SW24 774 aa1.4□□□□□ -2.19
HIF1A-204ENST00000539097 SWSAP1Q6NVH7 229 aa1.4□□□□□ -2.19
HIF1A-204ENST00000539097 PRR23CQ6ZRP0 262 aa1.4□□□□□ -2.19
HIF1A-204ENST00000539097 EPM2AIP1Q7L775 607 aaPredicted RBP1.4□□□□□ -2.19
HIF1A-204ENST00000539097 DPP9Q86TI2 863 aa1.4□□□□□ -2.19
HIF1A-204ENST00000539097 MIB1Q86YT6 1006 aa1.4□□□□□ -2.19
HIF1A-204ENST00000539097 LYSMD2Q8IV50 215 aa1.4□□□□□ -2.19
HIF1A-204ENST00000539097 TEX2Q8IWB9 1127 aa1.4□□□□□ -2.19
HIF1A-204ENST00000539097 PRR18Q8N4B5 295 aa1.4□□□□□ -2.19
HIF1A-204ENST00000539097 CHTF18Q8WVB6 975 aa1.4□□□□□ -2.19
HIF1A-204ENST00000539097 PLCD4Q9BRC7 762 aa1.4□□□□□ -2.19
HIF1A-204ENST00000539097 PHF20Q9BVI0 1012 aa1.4□□□□□ -2.19
HIF1A-204ENST00000539097 UNC45AQ9H3U1 944 aa1.4□□□□□ -2.19
HIF1A-204ENST00000539097 ATP13A1Q9HD20 1204 aa1.4□□□□□ -2.19
HIF1A-204ENST00000539097 PRDM11Q9NQV5 511 aa1.4□□□□□ -2.19
HIF1A-204ENST00000539097 SEMA3GQ9NS98 782 aa1.4□□□□□ -2.19
HIF1A-204ENST00000539097 C19orf73Q9NVV2 129 aa1.4□□□□□ -2.19
HIF1A-204ENST00000539097 TIMM13Q9Y5L4 95 aaPredicted RBP1.4□□□□□ -2.19
HIF1A-204ENST00000539097 NUMBLQ9Y6R0 609 aa1.4□□□□□ -2.19
HIF1A-204ENST00000539097 S100BP04271 92 aaPredicted RBP1.4□□□□□ -2.19
HIF1A-204ENST00000539097 VAV1P15498 845 aa1.4□□□□□ -2.19
HIF1A-204ENST00000539097 WNT3P56703 355 aa1.4□□□□□ -2.19
HIF1A-204ENST00000539097 JAM2P57087 298 aa1.4□□□□□ -2.19
HIF1A-204ENST00000539097 TAP1Q03518 808 aa1.4□□□□□ -2.19
HIF1A-204ENST00000539097 SPIRE1Q08AE8 756 aa1.4□□□□□ -2.19
HIF1A-204ENST00000539097 RTP5Q14D33 572 aa1.4□□□□□ -2.19
HIF1A-204ENST00000539097 FAM47CQ5HY64 1035 aa1.4□□□□□ -2.19
HIF1A-204ENST00000539097 SYCP2LQ5T4T6 812 aa1.4□□□□□ -2.19
HIF1A-204ENST00000539097 EMC10Q5UCC4 262 aa1.4□□□□□ -2.19
HIF1A-204ENST00000539097 CDKAL1Q5VV42 579 aa1.4□□□□□ -2.19
HIF1A-204ENST00000539097 ZCCHC8Q6NZY4 707 aaKnown RBP1.4□□□□□ -2.19
HIF1A-204ENST00000539097 SYDE1Q6ZW31 735 aaPredicted RBP1.4□□□□□ -2.19
HIF1A-204ENST00000539097 OVCH1Q7RTY7 1134 aa1.4□□□□□ -2.19
HIF1A-204ENST00000539097 OXR1Q8N573 874 aa1.4□□□□□ -2.19
HIF1A-204ENST00000539097 USHBP1Q8N6Y0 703 aa1.4□□□□□ -2.19
HIF1A-204ENST00000539097 PDZD8Q8NEN9 1154 aa1.4□□□□□ -2.19
HIF1A-204ENST00000539097 RIN2Q8WYP3 895 aaPredicted RBP1.4□□□□□ -2.19
HIF1A-204ENST00000539097 RUNDC1Q96C34 613 aa1.4□□□□□ -2.19
HIF1A-204ENST00000539097 MSLNLQ96KJ4 702 aa1.4□□□□□ -2.19
HIF1A-204ENST00000539097 FAM193BQ96PV7 902 aaPredicted RBP1.4□□□□□ -2.19
HIF1A-204ENST00000539097 BCAS3Q9H6U6 928 aa1.4□□□□□ -2.19
HIF1A-204ENST00000539097 AS3MTQ9HBK9 375 aa1.4□□□□□ -2.19
HIF1A-204ENST00000539097 CHST7Q9NS84 486 aa1.4□□□□□ -2.19
HIF1A-204ENST00000539097 TM7SF3Q9NS93 570 aa1.4□□□□□ -2.19
HIF1A-204ENST00000539097 C14orf119Q9NWQ9 140 aa1.4□□□□□ -2.19
HIF1A-204ENST00000539097 ERVK13-1Q9NX77 482 aa1.4□□□□□ -2.19
HIF1A-204ENST00000539097 GULP1Q9UBP9 304 aa1.4□□□□□ -2.19
HIF1A-204ENST00000539097 ADAMTS8Q9UP79 889 aa1.4□□□□□ -2.19
HIF1A-204ENST00000539097 KRTAP9-7A8MTY7 169 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 FAM47E-STBD1D6RA91 191 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 MYO1BO43795 1136 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 PHF2O75151 1096 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 ABLIM3O94929 683 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 SNRPB2P08579 225 aaKnown RBP1.39□□□□□ -2.19
HIF1A-204ENST00000539097 ZBTB48P10074 688 aaPredicted RBP1.39□□□□□ -2.19
HIF1A-204ENST00000539097 PAMP19021 973 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 ERVFC1P60507 584 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 BLOC1S1P78537 153 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 RALGPS1Q5JS13 557 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 PHF19Q5T6S3 580 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 ZNF574Q6ZN55 896 aaPredicted RBP1.39□□□□□ -2.19
HIF1A-204ENST00000539097 PCGF5Q86SE9 256 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 VSIG10LQ86VR7 867 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 OSTM1Q86WC4 334 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 KSR1Q8IVT5 923 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 PPIL6Q8IXY8 311 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 WDR66Q8TBY9 1149 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 FATE1Q969F0 183 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 FBXW5Q969U6 566 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 TCTN2Q96GX1 697 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 GPR101Q96P66 508 aaPredicted RBP1.39□□□□□ -2.19
HIF1A-204ENST00000539097 CDC6Q99741 560 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 NPAS1Q99742 590 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 CD244Q9BZW8 370 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 CDH19Q9H159 772 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 IPPKQ9H8X2 491 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 SP110Q9HB58 689 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 ATG3Q9NT62 314 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 TUBD1Q9UJT1 453 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 ANAPC4Q9UJX5 808 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 ADAMTS6Q9UKP5 1117 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 CA14Q9ULX7 337 aa1.39□□□□□ -2.19
HIF1A-204ENST00000539097 PCDHA2Q9Y5H9 948 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms