RNA–Protein interactions for RNA: ENST00000538998.1

PBX3-212, Transcript of PBX homeobox 3, humanhuman

TSL 2

Gene PBX3, Length 1,035 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-212ENST00000538998 MBLAC1A4D2B0 266 aaPredicted RBP16.28■□□□□ 0.2
PBX3-212ENST00000538998 STAG3L1P0CL83 205 aa16.28■□□□□ 0.2
PBX3-212ENST00000538998 TCF7P36402 384 aaPredicted RBP16.28■□□□□ 0.2
PBX3-212ENST00000538998 HDAC1Q13547 482 aaPredicted RBP16.28■□□□□ 0.2
PBX3-212ENST00000538998 GRM4Q14833 912 aa16.28■□□□□ 0.2
PBX3-212ENST00000538998 SLC35G1Q2M3R5 365 aa16.28■□□□□ 0.2
PBX3-212ENST00000538998 PCNX4Q63HM2 1172 aa16.28■□□□□ 0.2
PBX3-212ENST00000538998 NLRX1Q86UT6 975 aa16.28■□□□□ 0.2
PBX3-212ENST00000538998 NPAS4Q8IUM7 802 aa16.28■□□□□ 0.2
PBX3-212ENST00000538998 KLHL23Q8NBE8 558 aa16.28■□□□□ 0.2
PBX3-212ENST00000538998 POF1BQ8WVV4 589 aa16.28■□□□□ 0.2
PBX3-212ENST00000538998 ERAP1Q9NZ08 941 aa16.28■□□□□ 0.2
PBX3-212ENST00000538998 BARX2Q9UMQ3 279 aaPredicted RBP16.28■□□□□ 0.2
PBX3-212ENST00000538998 CDY2AQ9Y6F7 541 aa16.28■□□□□ 0.2
PBX3-212ENST00000538998 HIP1O00291 1037 aa16.27■□□□□ 0.2
PBX3-212ENST00000538998 GFRA3O60609 400 aa16.27■□□□□ 0.2
PBX3-212ENST00000538998 GLP2RO95838 553 aa16.27■□□□□ 0.2
PBX3-212ENST00000538998 ATF7P17544 494 aaPredicted RBP16.27■□□□□ 0.2
PBX3-212ENST00000538998 MRPS6P82932 125 aaKnown RBP16.27■□□□□ 0.2
PBX3-212ENST00000538998 GRIK4Q16099 956 aa16.27■□□□□ 0.2
PBX3-212ENST00000538998 CRIPAKQ8N1N5 446 aa16.27■□□□□ 0.2
PBX3-212ENST00000538998 DNAJB3Q8WWF6 145 aa16.27■□□□□ 0.2
PBX3-212ENST00000538998 LINC01599Q8WXQ3 324 aa16.27■□□□□ 0.2
PBX3-212ENST00000538998 TELO2Q9Y4R8 837 aa16.27■□□□□ 0.2
PBX3-212ENST00000538998 SQORQ9Y6N5 450 aa16.27■□□□□ 0.2
PBX3-212ENST00000538998 CYTH3O43739 400 aa16.26■□□□□ 0.19
PBX3-212ENST00000538998 CD52P31358 61 aa16.26■□□□□ 0.19
PBX3-212ENST00000538998 RBM23Q86U06 439 aaKnown RBP16.26■□□□□ 0.19
PBX3-212ENST00000538998 SMARCC2Q8TAQ2 1214 aa16.26■□□□□ 0.19
PBX3-212ENST00000538998 CUL5Q93034 780 aa16.26■□□□□ 0.19
PBX3-212ENST00000538998 CDHR1Q96JP9 859 aa16.26■□□□□ 0.19
PBX3-212ENST00000538998 RPGRIP1Q96KN7 1286 aa16.26■□□□□ 0.19
PBX3-212ENST00000538998 LNPKQ9C0E8 428 aa16.26■□□□□ 0.19
PBX3-212ENST00000538998 AGO3Q9H9G7 860 aaKnown RBP16.26■□□□□ 0.19
PBX3-212ENST00000538998 TTC3P53804 2025 aa16.26■□□□□ 0.19
PBX3-212ENST00000538998 USP34Q70CQ2 3546 aa16.25■□□□□ 0.19
PBX3-212ENST00000538998 M0QZ92 97 aa16.25■□□□□ 0.19
PBX3-212ENST00000538998 SCG2P13521 617 aa16.25■□□□□ 0.19
PBX3-212ENST00000538998 MARK3P27448 753 aa16.25■□□□□ 0.19
PBX3-212ENST00000538998 FOXK2Q01167 660 aa16.25■□□□□ 0.19
PBX3-212ENST00000538998 PAN2Q504Q3 1202 aaKnown RBP16.25■□□□□ 0.19
PBX3-212ENST00000538998 MARCH8Q5T0T0 291 aa16.25■□□□□ 0.19
PBX3-212ENST00000538998 IER5Q5VY09 327 aa16.25■□□□□ 0.19
PBX3-212ENST00000538998 CYB5R4Q7L1T6 521 aa16.25■□□□□ 0.19
PBX3-212ENST00000538998 SEPT1Q8WYJ6 367 aa16.25■□□□□ 0.19
PBX3-212ENST00000538998 GLG1Q92896 1179 aa16.25■□□□□ 0.19
PBX3-212ENST00000538998 GPRASP2Q96D09 838 aa16.25■□□□□ 0.19
PBX3-212ENST00000538998 ASIC4Q96FT7 647 aa16.25■□□□□ 0.19
PBX3-212ENST00000538998 CDCA3Q99618 268 aaPredicted RBP16.25■□□□□ 0.19
PBX3-212ENST00000538998 TLE6Q9H808 572 aa16.25■□□□□ 0.19
PBX3-212ENST00000538998 RRN3P2A6NIE6 340 aa16.24■□□□□ 0.19
PBX3-212ENST00000538998 NUBP1P53384 320 aa16.24■□□□□ 0.19
PBX3-212ENST00000538998 VCPP55072 806 aaKnown RBP16.24■□□□□ 0.19
PBX3-212ENST00000538998 UBE3AQ05086 875 aa16.24■□□□□ 0.19
PBX3-212ENST00000538998 TRDNQ13061 729 aa16.24■□□□□ 0.19
PBX3-212ENST00000538998 RTN4RL1Q86UN2 441 aaPredicted RBP16.24■□□□□ 0.19
PBX3-212ENST00000538998 SUSD6Q92537 303 aa16.24■□□□□ 0.19
PBX3-212ENST00000538998 ATOH1Q92858 354 aaPredicted RBP16.24■□□□□ 0.19
PBX3-212ENST00000538998 FAM49AQ9H0Q0 323 aaPredicted RBP16.24■□□□□ 0.19
PBX3-212ENST00000538998 SMARCAD1Q9H4L7 1026 aa16.24■□□□□ 0.19
PBX3-212ENST00000538998 FAM86C1Q9NVL1 165 aa16.24■□□□□ 0.19
PBX3-212ENST00000538998 KMT2EQ8IZD2 1858 aa16.24■□□□□ 0.19
PBX3-212ENST00000538998 ERICH2A1L162 156 aa16.23■□□□□ 0.19
PBX3-212ENST00000538998 PIK3CDO00329 1044 aa16.23■□□□□ 0.19
PBX3-212ENST00000538998 SRGAP2BP0DMP2 458 aa16.23■□□□□ 0.19
PBX3-212ENST00000538998 KCNA2P16389 499 aa16.23■□□□□ 0.19
PBX3-212ENST00000538998 AVPR2P30518 371 aa16.23■□□□□ 0.19
PBX3-212ENST00000538998 IGBP1P78318 339 aa16.23■□□□□ 0.19
PBX3-212ENST00000538998 PAK2Q13177 524 aa16.23■□□□□ 0.19
PBX3-212ENST00000538998 PTPN21Q16825 1174 aa16.23■□□□□ 0.19
PBX3-212ENST00000538998 USP17L6PQ6QN14 398 aa16.23■□□□□ 0.19
PBX3-212ENST00000538998 FAM43BQ6ZT52 329 aaPredicted RBP16.23■□□□□ 0.19
PBX3-212ENST00000538998 MICAL1Q8TDZ2 1067 aa16.23■□□□□ 0.19
PBX3-212ENST00000538998 ATP8B4Q8TF62 1192 aa16.23■□□□□ 0.19
PBX3-212ENST00000538998 NEK1Q96PY6 1258 aa16.23■□□□□ 0.19
PBX3-212ENST00000538998 OSBPL3Q9H4L5 887 aa16.23■□□□□ 0.19
PBX3-212ENST00000538998 AAASQ9NRG9 546 aa16.23■□□□□ 0.19
PBX3-212ENST00000538998 LRFN2Q9ULH4 789 aa16.23■□□□□ 0.19
PBX3-212ENST00000538998 PADI3Q9ULW8 664 aa16.23■□□□□ 0.19
PBX3-212ENST00000538998 PCDHB12Q9Y5F1 795 aa16.23■□□□□ 0.19
PBX3-212ENST00000538998 TRPV2Q9Y5S1 764 aa16.23■□□□□ 0.19
PBX3-212ENST00000538998 IGSF9BQ9UPX0 1349 aa16.22■□□□□ 0.19
PBX3-212ENST00000538998 GSTTP1A0A1W2PQM5 241 aa16.22■□□□□ 0.19
PBX3-212ENST00000538998 IFIT3O14879 490 aaKnown RBP16.22■□□□□ 0.19
PBX3-212ENST00000538998 ATP9AO75110 1047 aa16.22■□□□□ 0.19
PBX3-212ENST00000538998 TROAPQ12815 778 aa16.22■□□□□ 0.19
PBX3-212ENST00000538998 PDE12Q6L8Q7 609 aaKnown RBP16.22■□□□□ 0.19
PBX3-212ENST00000538998 TNPO1Q92973 898 aaKnown RBP16.22■□□□□ 0.19
PBX3-212ENST00000538998 TLR9Q9NR96 1032 aa16.22■□□□□ 0.19
PBX3-212ENST00000538998 RNF216Q9NWF9 866 aaPredicted RBP16.22■□□□□ 0.19
PBX3-212ENST00000538998 PCDHGC5Q9Y5F6 944 aa16.22■□□□□ 0.19
PBX3-212ENST00000538998 DOCK5Q9H7D0 1870 aa16.22■□□□□ 0.19
PBX3-212ENST00000538998 KIAA1671Q9BY89 1806 aa16.22■□□□□ 0.19
PBX3-212ENST00000538998 MEIS2O14770 477 aa16.21■□□□□ 0.19
PBX3-212ENST00000538998 PPFIA3O75145 1194 aa16.21■□□□□ 0.19
PBX3-212ENST00000538998 INSRRP14616 1297 aa16.21■□□□□ 0.19
PBX3-212ENST00000538998 WTAPQ15007 396 aa16.21■□□□□ 0.19
PBX3-212ENST00000538998 SART3Q15020 963 aaKnown RBP16.21■□□□□ 0.19
PBX3-212ENST00000538998 DUSP6Q16828 381 aa16.21■□□□□ 0.19
PBX3-212ENST00000538998 ZBTB33Q86T24 672 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms