RNA–Protein interactions for RNA: ENST00000538418.1

CD9-207, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-207ENST00000538418 FAM193BQ96PV7 902 aaPredicted RBP10.94□□□□□ -0.66
CD9-207ENST00000538418 ACO2Q99798 780 aaKnown RBP10.94□□□□□ -0.66
CD9-207ENST00000538418 SENP7Q9BQF6 1050 aa10.94□□□□□ -0.66
CD9-207ENST00000538418 LUZP4Q9P127 313 aa10.94□□□□□ -0.66
CD9-207ENST00000538418 FBXL7Q9UJT9 491 aa10.94□□□□□ -0.66
CD9-207ENST00000538418 PCDHA11Q9Y5I1 949 aa10.94□□□□□ -0.66
CD9-207ENST00000538418 TIMM13Q9Y5L4 95 aaPredicted RBP10.94□□□□□ -0.66
CD9-207ENST00000538418 MADDQ8WXG6 1647 aa10.94□□□□□ -0.66
CD9-207ENST00000538418 ARHGAP35Q9NRY4 1499 aa10.93□□□□□ -0.66
CD9-207ENST00000538418 KDM1AO60341 852 aa10.93□□□□□ -0.66
CD9-207ENST00000538418 ZNF205O95201 554 aa10.93□□□□□ -0.66
CD9-207ENST00000538418 HOXB4P17483 251 aaPredicted RBP10.93□□□□□ -0.66
CD9-207ENST00000538418 KRT15P19012 456 aa10.93□□□□□ -0.66
CD9-207ENST00000538418 ALDH5A1P51649 535 aaPredicted RBP10.93□□□□□ -0.66
CD9-207ENST00000538418 XRRA1Q6P2D8 792 aa10.93□□□□□ -0.66
CD9-207ENST00000538418 CPXCR1Q8N123 301 aa10.93□□□□□ -0.66
CD9-207ENST00000538418 PIWIL2Q8TC59 973 aaKnown RBP10.93□□□□□ -0.66
CD9-207ENST00000538418 TGFBRAP1Q8WUH2 860 aa10.93□□□□□ -0.66
CD9-207ENST00000538418 HPS3Q969F9 1004 aa10.93□□□□□ -0.66
CD9-207ENST00000538418 TRIM11Q96F44 468 aa10.93□□□□□ -0.66
CD9-207ENST00000538418 GPR62Q9BZJ7 368 aa10.93□□□□□ -0.66
CD9-207ENST00000538418 PCIF1Q9H4Z3 704 aa10.93□□□□□ -0.66
CD9-207ENST00000538418 FAM204AQ9H8W3 233 aa10.93□□□□□ -0.66
CD9-207ENST00000538418 BCCIPQ9P287 314 aaKnown RBP eCLIP10.93□□□□□ -0.66
CD9-207ENST00000538418 HECW1Q76N89 1606 aa10.92□□□□□ -0.66
CD9-207ENST00000538418 TTC37Q6PGP7 1564 aa10.92□□□□□ -0.66
CD9-207ENST00000538418 LEFTY1O75610 366 aa10.92□□□□□ -0.66
CD9-207ENST00000538418 ALX3O95076 343 aa10.92□□□□□ -0.66
CD9-207ENST00000538418 SETSIPP0DME0 302 aa10.92□□□□□ -0.66
CD9-207ENST00000538418 MYBP10242 640 aa10.92□□□□□ -0.66
CD9-207ENST00000538418 SLC5A1P13866 664 aa10.92□□□□□ -0.66
CD9-207ENST00000538418 ELNP15502 786 aa10.92□□□□□ -0.66
CD9-207ENST00000538418 PPM1FP49593 454 aaPredicted RBP10.92□□□□□ -0.66
CD9-207ENST00000538418 GTF2A2P52657 109 aa10.92□□□□□ -0.66
CD9-207ENST00000538418 HSPA2P54652 639 aa10.92□□□□□ -0.66
CD9-207ENST00000538418 ADKP55263 362 aaKnown RBP10.92□□□□□ -0.66
CD9-207ENST00000538418 TNK2Q07912 1038 aa10.92□□□□□ -0.66
CD9-207ENST00000538418 GPR19Q15760 415 aa10.92□□□□□ -0.66
CD9-207ENST00000538418 SGO2Q562F6 1265 aa10.92□□□□□ -0.66
CD9-207ENST00000538418 HHIPL2Q6UWX4 724 aa10.92□□□□□ -0.66
CD9-207ENST00000538418 CPNE8Q86YQ8 564 aa10.92□□□□□ -0.66
CD9-207ENST00000538418 ZBTB34Q8NCN2 500 aa10.92□□□□□ -0.66
CD9-207ENST00000538418 DIS3LQ8TF46 1054 aaKnown RBP10.92□□□□□ -0.66
CD9-207ENST00000538418 SSH1Q8WYL5 1049 aa10.92□□□□□ -0.66
CD9-207ENST00000538418 TMEM169Q96HH4 297 aa10.92□□□□□ -0.66
CD9-207ENST00000538418 ACAP3Q96P50 834 aa10.92□□□□□ -0.66
CD9-207ENST00000538418 CEP41Q9BYV8 373 aa10.92□□□□□ -0.66
CD9-207ENST00000538418 GTPBP4Q9BZE4 634 aaKnown RBP10.92□□□□□ -0.66
CD9-207ENST00000538418 C1GALT1Q9NS00 363 aa10.92□□□□□ -0.66
CD9-207ENST00000538418 DNAJC28Q9NX36 388 aa10.92□□□□□ -0.66
CD9-207ENST00000538418 PPP2R3BQ9Y5P8 575 aa10.92□□□□□ -0.66
CD9-207ENST00000538418 CDK13Q14004 1512 aaKnown RBP10.92□□□□□ -0.66
CD9-207ENST00000538418 ABHD14A-ACY1A0A1B0GW23 586 aa10.91□□□□□ -0.66
CD9-207ENST00000538418 LCHNA4D1U4 455 aa10.91□□□□□ -0.66
CD9-207ENST00000538418 FGF10O15520 208 aaPredicted RBP10.91□□□□□ -0.66
CD9-207ENST00000538418 HRGP04196 525 aa10.91□□□□□ -0.66
CD9-207ENST00000538418 AMY2AP04746 511 aa10.91□□□□□ -0.66
CD9-207ENST00000538418 POU2F2P09086 479 aa10.91□□□□□ -0.66
CD9-207ENST00000538418 SRFP11831 508 aa10.91□□□□□ -0.66
CD9-207ENST00000538418 AMY2BP19961 511 aa10.91□□□□□ -0.66
CD9-207ENST00000538418 KIF11P52732 1056 aa10.91□□□□□ -0.66
CD9-207ENST00000538418 TRIM28Q13263 835 aaKnown RBP10.91□□□□□ -0.66
CD9-207ENST00000538418 LONRF1Q17RB8 773 aa10.91□□□□□ -0.66
CD9-207ENST00000538418 ANGEL2Q5VTE6 544 aaKnown RBP10.91□□□□□ -0.66
CD9-207ENST00000538418 LILRA6Q6PI73 481 aa10.91□□□□□ -0.66
CD9-207ENST00000538418 C22orf34Q6ZV56 151 aa10.91□□□□□ -0.66
CD9-207ENST00000538418 ZMAT4Q9H898 229 aa10.91□□□□□ -0.66
CD9-207ENST00000538418 CLDND1Q9NY35 253 aa10.91□□□□□ -0.66
CD9-207ENST00000538418 GTF2IRD1Q9UHL9 959 aa10.91□□□□□ -0.66
CD9-207ENST00000538418 MLH3Q9UHC1 1453 aa10.91□□□□□ -0.66
CD9-207ENST00000538418 PIP5K1CO60331 668 aa10.9□□□□□ -0.66
CD9-207ENST00000538418 NBNO60934 754 aa10.9□□□□□ -0.66
CD9-207ENST00000538418 BCL6P41182 706 aa10.9□□□□□ -0.66
CD9-207ENST00000538418 RPL11P62913 178 aaKnown RBP10.9□□□□□ -0.66
CD9-207ENST00000538418 LMOD3Q0VAK6 560 aa10.9□□□□□ -0.66
CD9-207ENST00000538418 FOXD4Q12950 439 aaPredicted RBP10.9□□□□□ -0.66
CD9-207ENST00000538418 FAM214BQ7L5A3 538 aa10.9□□□□□ -0.66
CD9-207ENST00000538418 SKAP1Q86WV1 359 aa10.9□□□□□ -0.66
CD9-207ENST00000538418 ACRBPQ8NEB7 543 aa10.9□□□□□ -0.66
CD9-207ENST00000538418 GIMAP7Q8NHV1 300 aa10.9□□□□□ -0.66
CD9-207ENST00000538418 PTCHD1Q96NR3 888 aa10.9□□□□□ -0.66
CD9-207ENST00000538418 JAM3Q9BX67 310 aa10.9□□□□□ -0.66
CD9-207ENST00000538418 SP110Q9HB58 689 aa10.9□□□□□ -0.66
CD9-207ENST00000538418 NGRNQ9NPE2 291 aaKnown RBP10.9□□□□□ -0.66
CD9-207ENST00000538418 LZTS1Q9Y250 596 aa10.9□□□□□ -0.66
CD9-207ENST00000538418 CASKIN1Q8WXD9 1431 aa10.9□□□□□ -0.66
CD9-207ENST00000538418 ARHGEF12Q9NZN5 1544 aa10.89□□□□□ -0.67
CD9-207ENST00000538418 CCDC18Q5T9S5 1454 aa10.89□□□□□ -0.67
CD9-207ENST00000538418 SETD1BQ9UPS6 1966 aaKnown RBP10.89□□□□□ -0.67
CD9-207ENST00000538418 PRR33A8MZF0 331 aa10.89□□□□□ -0.67
CD9-207ENST00000538418 KCNK3O14649 394 aa10.89□□□□□ -0.67
CD9-207ENST00000538418 HIP1RO75146 1068 aa10.89□□□□□ -0.67
CD9-207ENST00000538418 SYPP08247 313 aa10.89□□□□□ -0.67
CD9-207ENST00000538418 ZNF865P0CJ78 1059 aaPredicted RBP10.89□□□□□ -0.67
CD9-207ENST00000538418 ZKSCAN1P17029 563 aaPredicted RBP10.89□□□□□ -0.67
CD9-207ENST00000538418 TYRP1P17643 537 aa10.89□□□□□ -0.67
CD9-207ENST00000538418 AGXTP21549 392 aa10.89□□□□□ -0.67
CD9-207ENST00000538418 C5AR1P21730 350 aa10.89□□□□□ -0.67
CD9-207ENST00000538418 CD40P25942 277 aa10.89□□□□□ -0.67
CD9-207ENST00000538418 ECE1P42892 770 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms