RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 SERPINB6P35237 376 aa18.14■□□□□ 0.49
SCARB1-205ENST00000538291 ZNF667Q5HYK9 610 aa18.14■□□□□ 0.49
SCARB1-205ENST00000538291 BZW1Q7L1Q6 419 aaKnown RBP18.14■□□□□ 0.49
SCARB1-205ENST00000538291 BHMT2Q9H2M3 363 aa18.14■□□□□ 0.49
SCARB1-205ENST00000538291 PHLPP2Q6ZVD8 1323 aa18.14■□□□□ 0.49
SCARB1-205ENST00000538291 ENC1O14682 589 aa18.13■□□□□ 0.49
SCARB1-205ENST00000538291 GRAMD1CQ8IYS0 662 aa18.13■□□□□ 0.49
SCARB1-205ENST00000538291 FTOQ9C0B1 505 aaKnown RBP eCLIP18.13■□□□□ 0.49
SCARB1-205ENST00000538291 SH3GLB2Q9NR46 395 aa18.13■□□□□ 0.49
SCARB1-205ENST00000538291 CDC25BP30305 580 aa18.13■□□□□ 0.49
SCARB1-205ENST00000538291 PLTPP55058 493 aa18.13■□□□□ 0.49
SCARB1-205ENST00000538291 DPCR1Q3MIW9 517 aa18.13■□□□□ 0.49
SCARB1-205ENST00000538291 GBP5Q96PP8 586 aa18.13■□□□□ 0.49
SCARB1-205ENST00000538291 NVLO15381 856 aaKnown RBP18.13■□□□□ 0.49
SCARB1-205ENST00000538291 LRRC63Q05C16 580 aa18.13■□□□□ 0.49
SCARB1-205ENST00000538291 GOLGA8IPA6NC78 632 aa18.13■□□□□ 0.49
SCARB1-205ENST00000538291 GOLGA8JA6NMD2 632 aa18.13■□□□□ 0.49
SCARB1-205ENST00000538291 PEX3P56589 373 aa18.13■□□□□ 0.49
SCARB1-205ENST00000538291 PCGF5Q86SE9 256 aa18.13■□□□□ 0.49
SCARB1-205ENST00000538291 THNSL1Q8IYQ7 743 aa18.13■□□□□ 0.49
SCARB1-205ENST00000538291 DDX27Q96GQ7 796 aaKnown RBP18.13■□□□□ 0.49
SCARB1-205ENST00000538291 PBKQ96KB5 322 aa18.13■□□□□ 0.49
SCARB1-205ENST00000538291 RNF14Q9UBS8 474 aa18.13■□□□□ 0.49
SCARB1-205ENST00000538291 SERPING1P05155 500 aa18.12■□□□□ 0.49
SCARB1-205ENST00000538291 SNAP25P60880 206 aa18.12■□□□□ 0.49
SCARB1-205ENST00000538291 ZBED6P86452 979 aa18.12■□□□□ 0.49
SCARB1-205ENST00000538291 ERICH1Q86X53 443 aa18.12■□□□□ 0.49
SCARB1-205ENST00000538291 BCAS4Q8TDM0 211 aa18.12■□□□□ 0.49
SCARB1-205ENST00000538291 CPSF2Q9P2I0 782 aaKnown RBP18.12■□□□□ 0.49
SCARB1-205ENST00000538291 ZHX2Q9Y6X8 837 aa18.12■□□□□ 0.49
SCARB1-205ENST00000538291 STMN1P16949 149 aa18.12■□□□□ 0.49
SCARB1-205ENST00000538291 IL1RL1Q01638 556 aa18.12■□□□□ 0.49
SCARB1-205ENST00000538291 TCP11X2Q5H9J9 407 aa18.12■□□□□ 0.49
SCARB1-205ENST00000538291 MCPH1Q8NEM0 835 aa18.12■□□□□ 0.49
SCARB1-205ENST00000538291 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.12■□□□□ 0.49
SCARB1-205ENST00000538291 ATP6V0A4Q9HBG4 840 aa18.12■□□□□ 0.49
SCARB1-205ENST00000538291 RCOR1Q9UKL0 485 aa18.12■□□□□ 0.49
SCARB1-205ENST00000538291 POLIQ9UNA4 740 aa18.12■□□□□ 0.49
SCARB1-205ENST00000538291 PMLP29590 882 aa18.12■□□□□ 0.49
SCARB1-205ENST00000538291 TNFAIP2Q03169 654 aa18.12■□□□□ 0.49
SCARB1-205ENST00000538291 GPT2Q8TD30 523 aa18.12■□□□□ 0.49
SCARB1-205ENST00000538291 RMDN3Q96TC7 470 aa18.12■□□□□ 0.49
SCARB1-205ENST00000538291 BCL2L12Q9HB09 334 aa18.12■□□□□ 0.49
SCARB1-205ENST00000538291 ROBO2Q9HCK4 1378 aa18.12■□□□□ 0.49
SCARB1-205ENST00000538291 EVI5O60447 810 aa18.12■□□□□ 0.49
SCARB1-205ENST00000538291 ZNF18P17022 549 aa18.12■□□□□ 0.49
SCARB1-205ENST00000538291 SOX5P35711 763 aa18.12■□□□□ 0.49
SCARB1-205ENST00000538291 MTMR1Q13613 665 aa18.12■□□□□ 0.49
SCARB1-205ENST00000538291 SLC12A1Q13621 1099 aa18.12■□□□□ 0.49
SCARB1-205ENST00000538291 TMCO4Q5TGY1 634 aa18.12■□□□□ 0.49
SCARB1-205ENST00000538291 RABGGTAQ92696 567 aa18.12■□□□□ 0.49
SCARB1-205ENST00000538291 DACT3Q96B18 629 aaPredicted RBP18.12■□□□□ 0.49
SCARB1-205ENST00000538291 MID2Q9UJV3 735 aa18.12■□□□□ 0.49
SCARB1-205ENST00000538291 CFAP65Q6ZU64 1925 aaKnown RBP18.12■□□□□ 0.49
SCARB1-205ENST00000538291 ZBED1O96006 694 aa18.12■□□□□ 0.49
SCARB1-205ENST00000538291 MT-ND3P03897 115 aa18.12■□□□□ 0.49
SCARB1-205ENST00000538291 SPOPLQ6IQ16 392 aa18.12■□□□□ 0.49
SCARB1-205ENST00000538291 PODNQ7Z5L7 613 aa18.12■□□□□ 0.49
SCARB1-205ENST00000538291 FEM1BQ9UK73 627 aa18.12■□□□□ 0.49
SCARB1-205ENST00000538291 SCINQ9Y6U3 715 aa18.12■□□□□ 0.49
SCARB1-205ENST00000538291 CAPN7Q9Y6W3 813 aa18.12■□□□□ 0.49
SCARB1-205ENST00000538291 TTI1O43156 1089 aa18.11■□□□□ 0.49
SCARB1-205ENST00000538291 ATXN8OSP0DMR3 200 aa18.11■□□□□ 0.49
SCARB1-205ENST00000538291 KRT33BQ14525 404 aa18.11■□□□□ 0.49
SCARB1-205ENST00000538291 ENOX1Q8TC92 643 aaKnown RBP18.11■□□□□ 0.49
SCARB1-205ENST00000538291 WRNIP1Q96S55 665 aa18.11■□□□□ 0.49
SCARB1-205ENST00000538291 HSPA8P11142 646 aaKnown RBP18.11■□□□□ 0.49
SCARB1-205ENST00000538291 RNF219Q5W0B1 726 aaPredicted RBP18.11■□□□□ 0.49
SCARB1-205ENST00000538291 HINFPQ9BQA5 517 aa18.11■□□□□ 0.49
SCARB1-205ENST00000538291 EPB41L5Q9HCM4 733 aa18.11■□□□□ 0.49
SCARB1-205ENST00000538291 NARFQ9UHQ1 456 aa18.11■□□□□ 0.49
SCARB1-205ENST00000538291 PCDHB6Q9Y5E3 794 aa18.11■□□□□ 0.49
SCARB1-205ENST00000538291 USP17L5A8MUK1 530 aa18.11■□□□□ 0.49
SCARB1-205ENST00000538291 H7C1W4 665 aa18.11■□□□□ 0.49
SCARB1-205ENST00000538291 RECQLP46063 649 aaPredicted RBP18.11■□□□□ 0.49
SCARB1-205ENST00000538291 IFNAR2P48551 515 aa18.11■□□□□ 0.49
SCARB1-205ENST00000538291 EPHB4P54760 987 aa18.11■□□□□ 0.49
SCARB1-205ENST00000538291 SH3RF3Q8TEJ3 882 aaPredicted RBP18.11■□□□□ 0.49
SCARB1-205ENST00000538291 PSPC1Q8WXF1 523 aaKnown RBP18.11■□□□□ 0.49
SCARB1-205ENST00000538291 SPDL1Q96EA4 605 aa18.11■□□□□ 0.49
SCARB1-205ENST00000538291 PHKA2P46019 1235 aa18.11■□□□□ 0.49
SCARB1-205ENST00000538291 CACNB3P54284 484 aa18.11■□□□□ 0.49
SCARB1-205ENST00000538291 FAM83BQ5T0W9 1011 aa18.11■□□□□ 0.49
SCARB1-205ENST00000538291 TMTC3Q6ZXV5 915 aa18.11■□□□□ 0.49
SCARB1-205ENST00000538291 PPP1R13BQ96KQ4 1090 aa18.11■□□□□ 0.49
SCARB1-205ENST00000538291 TTC25Q96NG3 672 aa18.11■□□□□ 0.49
SCARB1-205ENST00000538291 CLASP1Q7Z460 1538 aa18.11■□□□□ 0.49
SCARB1-205ENST00000538291 OPHN1O60890 802 aa18.1■□□□□ 0.49
SCARB1-205ENST00000538291 TMED2Q15363 201 aa18.1■□□□□ 0.49
SCARB1-205ENST00000538291 ZSCAN26Q16670 478 aa18.1■□□□□ 0.49
SCARB1-205ENST00000538291 FGD4Q96M96 766 aa18.1■□□□□ 0.49
SCARB1-205ENST00000538291 PCDHA6Q9UN73 950 aa18.1■□□□□ 0.49
SCARB1-205ENST00000538291 PCDHA8Q9Y5H6 950 aa18.1■□□□□ 0.49
SCARB1-205ENST00000538291 GNGT2O14610 69 aa18.1■□□□□ 0.49
SCARB1-205ENST00000538291 EIF4A3P38919 411 aaKnown RBP18.1■□□□□ 0.49
SCARB1-205ENST00000538291 RCN2Q14257 317 aa18.1■□□□□ 0.49
SCARB1-205ENST00000538291 MAPK6Q16659 721 aa18.1■□□□□ 0.49
SCARB1-205ENST00000538291 ELMOD1Q8N336 334 aa18.1■□□□□ 0.49
SCARB1-205ENST00000538291 NDST4Q9H3R1 872 aa18.1■□□□□ 0.49
SCARB1-205ENST00000538291 EPS15L1Q9UBC2 864 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms