RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 PTPN22Q9Y2R2 807 aa5.82□□□□□ -1.48
LRP6-203ENST00000538239 PCDHA5Q9Y5H7 936 aa5.82□□□□□ -1.48
LRP6-203ENST00000538239 SGK1O00141 431 aa5.82□□□□□ -1.48
LRP6-203ENST00000538239 HGSO14964 777 aaPredicted RBP5.82□□□□□ -1.48
LRP6-203ENST00000538239 CLDN3O15551 220 aa5.82□□□□□ -1.48
LRP6-203ENST00000538239 CTSHP09668 335 aa5.82□□□□□ -1.48
LRP6-203ENST00000538239 MAPK4P31152 587 aa5.82□□□□□ -1.48
LRP6-203ENST00000538239 COG2Q14746 738 aa5.82□□□□□ -1.48
LRP6-203ENST00000538239 SURF1Q15526 300 aa5.82□□□□□ -1.48
LRP6-203ENST00000538239 CDO1Q16878 200 aa5.82□□□□□ -1.48
LRP6-203ENST00000538239 SLFN12LQ6IEE8 588 aa5.82□□□□□ -1.48
LRP6-203ENST00000538239 C1orf228Q6PIY5 440 aa5.82□□□□□ -1.48
LRP6-203ENST00000538239 PADI6Q6TGC4 694 aa5.82□□□□□ -1.48
LRP6-203ENST00000538239 BBS5Q8N3I7 341 aa5.82□□□□□ -1.48
LRP6-203ENST00000538239 OXER1Q8TDS5 423 aa5.82□□□□□ -1.48
LRP6-203ENST00000538239 PAGE5Q96GU1 130 aa5.82□□□□□ -1.48
LRP6-203ENST00000538239 MTFR1LQ9H019 292 aa5.82□□□□□ -1.48
LRP6-203ENST00000538239 TBC1D22BQ9NU19 505 aa5.82□□□□□ -1.48
LRP6-203ENST00000538239 RSPH14Q9UHP6 348 aa5.82□□□□□ -1.48
LRP6-203ENST00000538239 UBE2Q2LH0YL09 131 aa5.82□□□□□ -1.48
LRP6-203ENST00000538239 TFRCP02786 760 aaKnown RBP5.82□□□□□ -1.48
LRP6-203ENST00000538239 ZNF18P17022 549 aa5.82□□□□□ -1.48
LRP6-203ENST00000538239 SF3A3Q12874 501 aaKnown RBP eCLIP5.82□□□□□ -1.48
LRP6-203ENST00000538239 ZNF394Q53GI3 561 aa5.82□□□□□ -1.48
LRP6-203ENST00000538239 FRMPD1Q5SYB0 1578 aa5.82□□□□□ -1.48
LRP6-203ENST00000538239 LGSNQ5TDP6 509 aa5.82□□□□□ -1.48
LRP6-203ENST00000538239 HHATQ5VTY9 493 aa5.82□□□□□ -1.48
LRP6-203ENST00000538239 ARMCX2Q7L311 632 aa5.82□□□□□ -1.48
LRP6-203ENST00000538239 HDXQ7Z353 690 aa5.82□□□□□ -1.48
LRP6-203ENST00000538239 FAM133AQ8N9E0 248 aa5.82□□□□□ -1.48
LRP6-203ENST00000538239 GRK7Q8WTQ7 553 aa5.82□□□□□ -1.48
LRP6-203ENST00000538239 SRPRBQ9Y5M8 271 aaKnown RBP5.82□□□□□ -1.48
LRP6-203ENST00000538239 MAD1L1Q9Y6D9 718 aa5.82□□□□□ -1.48
LRP6-203ENST00000538239 DYNC1I1O14576 645 aa5.82□□□□□ -1.48
LRP6-203ENST00000538239 DYNC1LI2O43237 492 aaPredicted RBP5.82□□□□□ -1.48
LRP6-203ENST00000538239 C6orf222P0C671 652 aaPredicted RBP5.82□□□□□ -1.48
LRP6-203ENST00000538239 GPC3P51654 580 aa5.82□□□□□ -1.48
LRP6-203ENST00000538239 TUBB4BP68371 445 aa5.82□□□□□ -1.48
LRP6-203ENST00000538239 TNFAIP2Q03169 654 aa5.82□□□□□ -1.48
LRP6-203ENST00000538239 FYB2Q5VWT5 728 aa5.82□□□□□ -1.48
LRP6-203ENST00000538239 INTS5Q6P9B9 1019 aaKnown RBP5.82□□□□□ -1.48
LRP6-203ENST00000538239 TEX2Q8IWB9 1127 aa5.82□□□□□ -1.48
LRP6-203ENST00000538239 MICALL1Q8N3F8 863 aa5.82□□□□□ -1.48
LRP6-203ENST00000538239 NCAPGQ9BPX3 1015 aa5.82□□□□□ -1.48
LRP6-203ENST00000538239 E9PMD0 336 aa5.81□□□□□ -1.48
LRP6-203ENST00000538239 COPB2P35606 906 aa5.81□□□□□ -1.48
LRP6-203ENST00000538239 KRT76Q01546 638 aa5.81□□□□□ -1.48
LRP6-203ENST00000538239 FAM117BQ6P1L5 589 aa5.81□□□□□ -1.48
LRP6-203ENST00000538239 KRT222Q8N1A0 295 aa5.81□□□□□ -1.48
LRP6-203ENST00000538239 ANKRD13CQ8N6S4 541 aa5.81□□□□□ -1.48
LRP6-203ENST00000538239 SLC16A10Q8TF71 515 aa5.81□□□□□ -1.48
LRP6-203ENST00000538239 CCDC51Q96ER9 411 aa5.81□□□□□ -1.48
LRP6-203ENST00000538239 FAM213AQ9BRX8 229 aa5.81□□□□□ -1.48
LRP6-203ENST00000538239 GCOM2Q9BZD3 368 aaPredicted RBP5.81□□□□□ -1.48
LRP6-203ENST00000538239 DEFB129Q9H1M3 183 aa5.81□□□□□ -1.48
LRP6-203ENST00000538239 CCDC68Q9H2F9 335 aa5.81□□□□□ -1.48
LRP6-203ENST00000538239 UBN1Q9NPG3 1134 aa5.81□□□□□ -1.48
LRP6-203ENST00000538239 RIC8AQ9NPQ8 531 aa5.81□□□□□ -1.48
LRP6-203ENST00000538239 ZNF148Q9UQR1 794 aa5.81□□□□□ -1.48
LRP6-203ENST00000538239 NOC2LQ9Y3T9 749 aaKnown RBP5.81□□□□□ -1.48
LRP6-203ENST00000538239 ESYT2A0FGR8 921 aa5.81□□□□□ -1.48
LRP6-203ENST00000538239 CETPP11597 493 aa5.81□□□□□ -1.48
LRP6-203ENST00000538239 MXI1P50539 228 aa5.81□□□□□ -1.48
LRP6-203ENST00000538239 GUCY2FP51841 1108 aa5.81□□□□□ -1.48
LRP6-203ENST00000538239 SETDB1Q15047 1291 aa5.81□□□□□ -1.48
LRP6-203ENST00000538239 LLGL1Q15334 1064 aa5.81□□□□□ -1.48
LRP6-203ENST00000538239 RWDD4Q6NW29 188 aaKnown RBP5.81□□□□□ -1.48
LRP6-203ENST00000538239 KCTD6Q8NC69 237 aa5.81□□□□□ -1.48
LRP6-203ENST00000538239 FAM76AQ8TAV0 307 aa5.81□□□□□ -1.48
LRP6-203ENST00000538239 MGARPQ8TDB4 240 aa5.81□□□□□ -1.48
LRP6-203ENST00000538239 GSDMAQ96QA5 445 aa5.81□□□□□ -1.48
LRP6-203ENST00000538239 PLA2G12BQ9BX93 195 aa5.81□□□□□ -1.48
LRP6-203ENST00000538239 DPH5Q9H2P9 285 aa5.81□□□□□ -1.48
LRP6-203ENST00000538239 ABCF3Q9NUQ8 709 aa5.81□□□□□ -1.48
LRP6-203ENST00000538239 LMCD1Q9NZU5 365 aa5.81□□□□□ -1.48
LRP6-203ENST00000538239 H2AFZP0C0S5 128 aa5.81□□□□□ -1.48
LRP6-203ENST00000538239 KCNJ6P48051 423 aa5.81□□□□□ -1.48
LRP6-203ENST00000538239 SNX1Q13596 522 aa5.81□□□□□ -1.48
LRP6-203ENST00000538239 DNAJC24Q6P3W2 148 aa5.81□□□□□ -1.48
LRP6-203ENST00000538239 H2AFVQ71UI9 128 aa5.81□□□□□ -1.48
LRP6-203ENST00000538239 MAP7D3Q8IWC1 876 aa5.81□□□□□ -1.48
LRP6-203ENST00000538239 GIMAP7Q8NHV1 300 aa5.81□□□□□ -1.48
LRP6-203ENST00000538239 AFG1LQ8WV93 481 aa5.81□□□□□ -1.48
LRP6-203ENST00000538239 SLC9A2Q9UBY0 812 aa5.81□□□□□ -1.48
LRP6-203ENST00000538239 IPO11Q9UI26 975 aaKnown RBP5.81□□□□□ -1.48
LRP6-203ENST00000538239 SLC8A2Q9UPR5 921 aa5.81□□□□□ -1.48
LRP6-203ENST00000538239 POTEB3A0JP26 581 aa5.81□□□□□ -1.48
LRP6-203ENST00000538239 POTECB2RU33 542 aa5.81□□□□□ -1.48
LRP6-203ENST00000538239 MYO1FO00160 1098 aa5.81□□□□□ -1.48
LRP6-203ENST00000538239 BUB1BO60566 1050 aaPredicted RBP5.81□□□□□ -1.48
LRP6-203ENST00000538239 CD2BP2O95400 341 aaKnown RBP5.81□□□□□ -1.48
LRP6-203ENST00000538239 KRT1P04264 644 aa5.81□□□□□ -1.48
LRP6-203ENST00000538239 EPHX2P34913 555 aa5.81□□□□□ -1.48
LRP6-203ENST00000538239 TSPY1Q01534 308 aa5.81□□□□□ -1.48
LRP6-203ENST00000538239 POTEBQ6S5H4 581 aa5.81□□□□□ -1.48
LRP6-203ENST00000538239 CCDC121Q6ZUS5 278 aa5.81□□□□□ -1.48
LRP6-203ENST00000538239 INTS8Q75QN2 995 aaKnown RBP5.81□□□□□ -1.48
LRP6-203ENST00000538239 KSR1Q8IVT5 923 aa5.81□□□□□ -1.48
LRP6-203ENST00000538239 LINC00301Q8NCQ3 95 aa5.81□□□□□ -1.48
LRP6-203ENST00000538239 GPT2Q8TD30 523 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms