RNA–Protein interactions for RNA: ENST00000538039.5

CLPB-209, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLPB, Length 3,078 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-209ENST00000538039 GRAPQ13588 217 aa15.46■□□□□ 0.07
CLPB-209ENST00000538039 GRAPLQ8TC17 118 aaPredicted RBP15.46■□□□□ 0.07
CLPB-209ENST00000538039 SCFD2Q8WU76 684 aa15.46■□□□□ 0.07
CLPB-209ENST00000538039 RUBCNQ92622 972 aa15.46■□□□□ 0.07
CLPB-209ENST00000538039 IQCDQ96DY2 449 aa15.46■□□□□ 0.07
CLPB-209ENST00000538039 ATP6V1G3Q96LB4 118 aa15.46■□□□□ 0.07
CLPB-209ENST00000538039 CCT8L2Q96SF2 557 aa15.46■□□□□ 0.07
CLPB-209ENST00000538039 TSG101Q99816 390 aa15.46■□□□□ 0.07
CLPB-209ENST00000538039 POLLQ9UGP5 575 aa15.46■□□□□ 0.07
CLPB-209ENST00000538039 CAPN7Q9Y6W3 813 aa15.46■□□□□ 0.07
CLPB-209ENST00000538039 RPS6KA4O75676 772 aa15.45■□□□□ 0.06
CLPB-209ENST00000538039 INPP5BP32019 993 aa15.45■□□□□ 0.06
CLPB-209ENST00000538039 GABPAQ06546 454 aa15.45■□□□□ 0.06
CLPB-209ENST00000538039 PAK2Q13177 524 aa15.45■□□□□ 0.06
CLPB-209ENST00000538039 PSMD2Q13200 908 aa15.45■□□□□ 0.06
CLPB-209ENST00000538039 PPP4R3AQ6IN85 833 aa15.45■□□□□ 0.06
CLPB-209ENST00000538039 PROM2Q8N271 834 aa15.45■□□□□ 0.06
CLPB-209ENST00000538039 MREGQ8N565 214 aa15.45■□□□□ 0.06
CLPB-209ENST00000538039 SYN2Q92777 582 aaPredicted RBP15.45■□□□□ 0.06
CLPB-209ENST00000538039 EDEM3Q9BZQ6 932 aa15.45■□□□□ 0.06
CLPB-209ENST00000538039 EPN3Q9H201 632 aa15.45■□□□□ 0.06
CLPB-209ENST00000538039 CNTNAP4Q9C0A0 1308 aa15.45■□□□□ 0.06
CLPB-209ENST00000538039 SHTN1A0MZ66 631 aa15.45■□□□□ 0.06
CLPB-209ENST00000538039 CEP104O60308 925 aa15.45■□□□□ 0.06
CLPB-209ENST00000538039 GUCY2CP25092 1073 aa15.45■□□□□ 0.06
CLPB-209ENST00000538039 MMS22LQ6ZRQ5 1243 aa15.45■□□□□ 0.06
CLPB-209ENST00000538039 MYCBPAPQ8TBZ2 947 aa15.45■□□□□ 0.06
CLPB-209ENST00000538039 SIX2Q9NPC8 291 aa15.45■□□□□ 0.06
CLPB-209ENST00000538039 AMACRQ9UHK6 382 aa15.45■□□□□ 0.06
CLPB-209ENST00000538039 ATAD5Q96QE3 1844 aa15.45■□□□□ 0.06
CLPB-209ENST00000538039 IGKV6D-41A0A0C4DH26 115 aa15.45■□□□□ 0.06
CLPB-209ENST00000538039 FAM196BA6NMK8 535 aa15.45■□□□□ 0.06
CLPB-209ENST00000538039 AKAP3O75969 853 aa15.45■□□□□ 0.06
CLPB-209ENST00000538039 UFL1O94874 794 aa15.45■□□□□ 0.06
CLPB-209ENST00000538039 KIF4AO95239 1232 aa15.45■□□□□ 0.06
CLPB-209ENST00000538039 UCHL3P15374 230 aa15.45■□□□□ 0.06
CLPB-209ENST00000538039 PON1P27169 355 aa15.45■□□□□ 0.06
CLPB-209ENST00000538039 HSPA9P38646 679 aaKnown RBP15.45■□□□□ 0.06
CLPB-209ENST00000538039 SLC12A3P55017 1021 aa15.45■□□□□ 0.06
CLPB-209ENST00000538039 GSTO1P78417 241 aa15.45■□□□□ 0.06
CLPB-209ENST00000538039 ZNF844Q08AG5 666 aa15.45■□□□□ 0.06
CLPB-209ENST00000538039 MAATS1Q7Z4T9 603 aa15.45■□□□□ 0.06
CLPB-209ENST00000538039 ZFPM1Q8IX07 1006 aa15.45■□□□□ 0.06
CLPB-209ENST00000538039 TMBIM4Q9HC24 238 aa15.45■□□□□ 0.06
CLPB-209ENST00000538039 PPANQ9NQ55 473 aaKnown RBP15.45■□□□□ 0.06
CLPB-209ENST00000538039 NAGPAQ9UK23 515 aa15.45■□□□□ 0.06
CLPB-209ENST00000538039 ATF5Q9Y2D1 282 aaPredicted RBP15.45■□□□□ 0.06
CLPB-209ENST00000538039 PPP1R37O75864 691 aa15.44■□□□□ 0.06
CLPB-209ENST00000538039 FGFR1OPO95684 399 aaKnown RBP15.44■□□□□ 0.06
CLPB-209ENST00000538039 NR2F2P24468 414 aa15.44■□□□□ 0.06
CLPB-209ENST00000538039 MDH1P40925 334 aaKnown RBP15.44■□□□□ 0.06
CLPB-209ENST00000538039 MARSP56192 900 aaKnown RBP15.44■□□□□ 0.06
CLPB-209ENST00000538039 ZNF543Q08ER8 600 aa15.44■□□□□ 0.06
CLPB-209ENST00000538039 ASIC2Q16515 512 aa15.44■□□□□ 0.06
CLPB-209ENST00000538039 CD302Q8IX05 232 aa15.44■□□□□ 0.06
CLPB-209ENST00000538039 DAGLAQ9Y4D2 1042 aa15.44■□□□□ 0.06
CLPB-209ENST00000538039 SFI1A8K8P3 1242 aa15.44■□□□□ 0.06
CLPB-209ENST00000538039 BHMG1C9JSJ3 638 aaPredicted RBP15.44■□□□□ 0.06
CLPB-209ENST00000538039 SART1O43290 800 aaKnown RBP15.44■□□□□ 0.06
CLPB-209ENST00000538039 SMARCA1P28370 1054 aa15.44■□□□□ 0.06
CLPB-209ENST00000538039 SF3A3Q12874 501 aaKnown RBP eCLIP15.44■□□□□ 0.06
CLPB-209ENST00000538039 HLTFQ14527 1009 aaKnown RBP eCLIP15.44■□□□□ 0.06
CLPB-209ENST00000538039 CDCA7Q9BWT1 371 aaPredicted RBP15.44■□□□□ 0.06
CLPB-209ENST00000538039 TAF1DQ9H5J8 278 aaPredicted RBP15.44■□□□□ 0.06
CLPB-209ENST00000538039 OSGEPQ9NPF4 335 aa15.44■□□□□ 0.06
CLPB-209ENST00000538039 HDAC9Q9UKV0 1011 aa15.44■□□□□ 0.06
CLPB-209ENST00000538039 LEMD3Q9Y2U8 911 aa15.44■□□□□ 0.06
CLPB-209ENST00000538039 THRAP3Q9Y2W1 955 aaKnown RBP15.44■□□□□ 0.06
CLPB-209ENST00000538039 PCDHAC2Q9Y5I4 1007 aa15.44■□□□□ 0.06
CLPB-209ENST00000538039 PNMA6FA0A0J9YX94 578 aa15.43■□□□□ 0.06
CLPB-209ENST00000538039 DAPK3O43293 454 aa15.43■□□□□ 0.06
CLPB-209ENST00000538039 SPIRE1Q08AE8 756 aa15.43■□□□□ 0.06
CLPB-209ENST00000538039 PABPC4Q13310 644 aaKnown RBP eCLIP15.43■□□□□ 0.06
CLPB-209ENST00000538039 EMC10Q5UCC4 262 aa15.43■□□□□ 0.06
CLPB-209ENST00000538039 ZNF804AQ7Z570 1209 aa15.43■□□□□ 0.06
CLPB-209ENST00000538039 NLRP14Q86W24 1093 aa15.43■□□□□ 0.06
CLPB-209ENST00000538039 CATSPER3Q86XQ3 398 aa15.43■□□□□ 0.06
CLPB-209ENST00000538039 KSR1Q8IVT5 923 aa15.43■□□□□ 0.06
CLPB-209ENST00000538039 ZC3H3Q8IXZ2 948 aaKnown RBP15.43■□□□□ 0.06
CLPB-209ENST00000538039 ADAMTSL1Q8N6G6 1762 aa15.43■□□□□ 0.06
CLPB-209ENST00000538039 IGSF9BQ9UPX0 1349 aa15.43■□□□□ 0.06
CLPB-209ENST00000538039 CLIC2O15247 247 aa15.43■□□□□ 0.06
CLPB-209ENST00000538039 MEFVO15553 781 aaPredicted RBP15.43■□□□□ 0.06
CLPB-209ENST00000538039 HYIQ5T013 277 aa15.43■□□□□ 0.06
CLPB-209ENST00000538039 CYP2W1Q8TAV3 490 aa15.43■□□□□ 0.06
CLPB-209ENST00000538039 NENFQ9UMX5 172 aa15.43■□□□□ 0.06
CLPB-209ENST00000538039 BCS1LQ9Y276 419 aa15.43■□□□□ 0.06
CLPB-209ENST00000538039 DDX3XO00571 662 aaKnown RBP eCLIP15.42■□□□□ 0.062e-8■□□□□ 9.3
CLPB-209ENST00000538039 ZBTB39O15060 712 aa15.42■□□□□ 0.06
CLPB-209ENST00000538039 SPATA31C1P0DKV0 1188 aa15.42■□□□□ 0.06
CLPB-209ENST00000538039 USP11P51784 963 aa15.42■□□□□ 0.06
CLPB-209ENST00000538039 IFT88Q13099 833 aa15.42■□□□□ 0.06
CLPB-209ENST00000538039 BYSLQ13895 437 aaKnown RBP15.42■□□□□ 0.06
CLPB-209ENST00000538039 GIT2Q14161 759 aa15.42■□□□□ 0.06
CLPB-209ENST00000538039 RPS6KA1Q15418 735 aa15.42■□□□□ 0.06
CLPB-209ENST00000538039 ADAT2Q7Z6V5 191 aaKnown RBP15.42■□□□□ 0.06
CLPB-209ENST00000538039 TPCN2Q8NHX9 752 aa15.42■□□□□ 0.06
CLPB-209ENST00000538039 CEP63Q96MT8 703 aa15.42■□□□□ 0.06
CLPB-209ENST00000538039 ISCUQ9H1K1 167 aa15.42■□□□□ 0.06
CLPB-209ENST00000538039 PSTPIP2Q9H939 334 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms