RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 GORASP1Q9BQQ3 440 aa12.42□□□□□ -0.42
SEMA4D-221ENST00000537934 FAM129AQ9BZQ8 928 aa12.42□□□□□ -0.42
SEMA4D-221ENST00000537934 ISCUQ9H1K1 167 aa12.42□□□□□ -0.42
SEMA4D-221ENST00000537934 GPR75-ASB3A0A0A6YYF3 556 aa12.41□□□□□ -0.42
SEMA4D-221ENST00000537934 GOLGA8AA7E2F4 631 aa12.41□□□□□ -0.42
SEMA4D-221ENST00000537934 TRPM8Q7Z2W7 1104 aa12.41□□□□□ -0.42
SEMA4D-221ENST00000537934 ERICH1Q86X53 443 aa12.41□□□□□ -0.42
SEMA4D-221ENST00000537934 TBC1D10CQ8IV04 446 aa12.41□□□□□ -0.42
SEMA4D-221ENST00000537934 IFNL3Q8IZI9 196 aa12.41□□□□□ -0.42
SEMA4D-221ENST00000537934 NKX2-3Q8TAU0 364 aa12.41□□□□□ -0.42
SEMA4D-221ENST00000537934 ZNF317Q96PQ6 595 aaPredicted RBP12.41□□□□□ -0.42
SEMA4D-221ENST00000537934 KCNJ14Q9UNX9 436 aa12.41□□□□□ -0.42
SEMA4D-221ENST00000537934 ATF5Q9Y2D1 282 aaPredicted RBP12.41□□□□□ -0.42
SEMA4D-221ENST00000537934 ASB3Q9Y575 518 aa12.41□□□□□ -0.42
SEMA4D-221ENST00000537934 LCA5LO95447 670 aa12.41□□□□□ -0.42
SEMA4D-221ENST00000537934 MYBP10242 640 aa12.41□□□□□ -0.42
SEMA4D-221ENST00000537934 ALDH5A1P51649 535 aaPredicted RBP12.41□□□□□ -0.42
SEMA4D-221ENST00000537934 MAGOHP61326 146 aaKnown RBP12.41□□□□□ -0.42
SEMA4D-221ENST00000537934 TAF11Q15544 211 aa12.41□□□□□ -0.42
SEMA4D-221ENST00000537934 DIXDC1Q155Q3 683 aa12.41□□□□□ -0.42
SEMA4D-221ENST00000537934 TRADDQ15628 312 aa12.41□□□□□ -0.42
SEMA4D-221ENST00000537934 DOK7Q18PE1 504 aa12.41□□□□□ -0.42
SEMA4D-221ENST00000537934 C10orf71Q711Q0 1435 aa12.41□□□□□ -0.42
SEMA4D-221ENST00000537934 CYB5R4Q7L1T6 521 aa12.41□□□□□ -0.42
SEMA4D-221ENST00000537934 DZIP1Q86YF9 867 aaKnown RBP12.41□□□□□ -0.42
SEMA4D-221ENST00000537934 ZNF513Q8N8E2 541 aaPredicted RBP12.41□□□□□ -0.42
SEMA4D-221ENST00000537934 WDR66Q8TBY9 1149 aa12.41□□□□□ -0.42
SEMA4D-221ENST00000537934 TEKT4Q8WW24 435 aa12.41□□□□□ -0.42
SEMA4D-221ENST00000537934 MAGOHBQ96A72 148 aaKnown RBP12.41□□□□□ -0.42
SEMA4D-221ENST00000537934 KRT12Q99456 494 aa12.41□□□□□ -0.42
SEMA4D-221ENST00000537934 NAPBQ9H115 298 aa12.41□□□□□ -0.42
SEMA4D-221ENST00000537934 THAP9Q9H5L6 903 aa12.41□□□□□ -0.42
SEMA4D-221ENST00000537934 INCENPQ9NQS7 918 aa12.41□□□□□ -0.42
SEMA4D-221ENST00000537934 EXOC1Q9NV70 894 aa12.41□□□□□ -0.42
SEMA4D-221ENST00000537934 RMND1Q9NWS8 449 aa12.41□□□□□ -0.42
SEMA4D-221ENST00000537934 A0A1W2PQJ5 194 aa12.4□□□□□ -0.42
SEMA4D-221ENST00000537934 EVI5O60447 810 aa12.4□□□□□ -0.42
SEMA4D-221ENST00000537934 LDHBP07195 334 aaKnown RBP12.4□□□□□ -0.42
SEMA4D-221ENST00000537934 VIMP08670 466 aaKnown RBP12.4□□□□□ -0.42
SEMA4D-221ENST00000537934 IMPDH2P12268 514 aa12.4□□□□□ -0.42
SEMA4D-221ENST00000537934 MAGEA8P43361 318 aa12.4□□□□□ -0.42
SEMA4D-221ENST00000537934 KCNJ2P63252 427 aa12.4□□□□□ -0.42
SEMA4D-221ENST00000537934 MXRA7P84157 204 aa12.4□□□□□ -0.42
SEMA4D-221ENST00000537934 CUL1Q13616 776 aa12.4□□□□□ -0.42
SEMA4D-221ENST00000537934 FAM133BQ5BKY9 247 aaKnown RBP12.4□□□□□ -0.42
SEMA4D-221ENST00000537934 KLHDC7AQ5VTJ3 777 aa12.4□□□□□ -0.42
SEMA4D-221ENST00000537934 SDCCAG8Q86SQ7 713 aaPredicted RBP12.4□□□□□ -0.42
SEMA4D-221ENST00000537934 SPICE1Q8N0Z3 855 aa12.4□□□□□ -0.42
SEMA4D-221ENST00000537934 SLC16A10Q8TF71 515 aa12.4□□□□□ -0.42
SEMA4D-221ENST00000537934 FERMT2Q96AC1 680 aa12.4□□□□□ -0.42
SEMA4D-221ENST00000537934 ZC3H12CQ9C0D7 883 aaKnown RBP12.4□□□□□ -0.42
SEMA4D-221ENST00000537934 BLZF1Q9H2G9 400 aa12.4□□□□□ -0.42
SEMA4D-221ENST00000537934 AGAP1Q9UPQ3 857 aa12.4□□□□□ -0.42
SEMA4D-221ENST00000537934 CCDC88AQ3V6T2 1871 aa12.4□□□□□ -0.42
SEMA4D-221ENST00000537934 SMIM22K7EJ46 135 aa12.4□□□□□ -0.42
SEMA4D-221ENST00000537934 GTPBP6O43824 516 aaPredicted RBP12.4□□□□□ -0.42
SEMA4D-221ENST00000537934 RANBP1P43487 201 aa12.4□□□□□ -0.42
SEMA4D-221ENST00000537934 MRPS35P82673 323 aaKnown RBP12.4□□□□□ -0.42
SEMA4D-221ENST00000537934 NR5A1Q13285 461 aa12.4□□□□□ -0.42
SEMA4D-221ENST00000537934 MTMR3Q13615 1198 aa12.4□□□□□ -0.42
SEMA4D-221ENST00000537934 LBRQ14739 615 aaKnown RBP12.4□□□□□ -0.42
SEMA4D-221ENST00000537934 R3HDM1Q15032 1099 aaKnown RBP12.4□□□□□ -0.42
SEMA4D-221ENST00000537934 FIGNQ5HY92 759 aa12.4□□□□□ -0.42
SEMA4D-221ENST00000537934 NUGGCQ68CJ6 796 aa12.4□□□□□ -0.42
SEMA4D-221ENST00000537934 TMEM87BQ96K49 555 aa12.4□□□□□ -0.42
SEMA4D-221ENST00000537934 WDR35Q9P2L0 1181 aa12.4□□□□□ -0.42
SEMA4D-221ENST00000537934 PJA2O43164 708 aa12.39□□□□□ -0.43
SEMA4D-221ENST00000537934 CTNND1O60716 968 aaKnown RBP12.39□□□□□ -0.43
SEMA4D-221ENST00000537934 SETSIPP0DME0 302 aa12.39□□□□□ -0.43
SEMA4D-221ENST00000537934 IFNAR1P17181 557 aa12.39□□□□□ -0.43
SEMA4D-221ENST00000537934 ECHS1P30084 290 aa12.39□□□□□ -0.43
SEMA4D-221ENST00000537934 ALDH3A1P30838 453 aa12.39□□□□□ -0.43
SEMA4D-221ENST00000537934 HNRNPH3P31942 346 aaKnown RBP12.39□□□□□ -0.43
SEMA4D-221ENST00000537934 GUCY1A2P33402 732 aa12.39□□□□□ -0.43
SEMA4D-221ENST00000537934 PRCPP42785 496 aa12.39□□□□□ -0.43
SEMA4D-221ENST00000537934 SGSM1Q2NKQ1 1148 aa12.39□□□□□ -0.43
SEMA4D-221ENST00000537934 PPP1R15BQ5SWA1 713 aa12.39□□□□□ -0.43
SEMA4D-221ENST00000537934 SGMS1Q86VZ5 419 aa12.39□□□□□ -0.43
SEMA4D-221ENST00000537934 STAMQ92783 540 aa12.39□□□□□ -0.43
SEMA4D-221ENST00000537934 RBM41Q96IZ5 413 aaKnown RBP12.39□□□□□ -0.43
SEMA4D-221ENST00000537934 CABP5Q9NP86 173 aa12.39□□□□□ -0.43
SEMA4D-221ENST00000537934 MAGEC2Q9UBF1 373 aaPredicted RBP12.39□□□□□ -0.43
SEMA4D-221ENST00000537934 TRIM75PA6NK02 468 aa12.39□□□□□ -0.43
SEMA4D-221ENST00000537934 RAD51CO43502 376 aa12.39□□□□□ -0.43
SEMA4D-221ENST00000537934 RARAP10276 462 aa12.39□□□□□ -0.43
SEMA4D-221ENST00000537934 PYGBP11216 843 aa12.39□□□□□ -0.43
SEMA4D-221ENST00000537934 ZNF131P52739 623 aa12.39□□□□□ -0.43
SEMA4D-221ENST00000537934 NCALDP61601 193 aa12.39□□□□□ -0.43
SEMA4D-221ENST00000537934 GTF2IP78347 998 aa12.39□□□□□ -0.43
SEMA4D-221ENST00000537934 CUL3Q13618 768 aa12.39□□□□□ -0.43
SEMA4D-221ENST00000537934 HLTFQ14527 1009 aaKnown RBP eCLIP12.39□□□□□ -0.43
SEMA4D-221ENST00000537934 MFSD14BQ5SR56 506 aa12.39□□□□□ -0.43
SEMA4D-221ENST00000537934 ANO7Q6IWH7 933 aa12.39□□□□□ -0.43
SEMA4D-221ENST00000537934 NCAPG2Q86XI2 1143 aa12.39□□□□□ -0.43
SEMA4D-221ENST00000537934 RNF10Q8N5U6 811 aaKnown RBP12.39□□□□□ -0.43
SEMA4D-221ENST00000537934 PRCCQ92733 491 aaPredicted RBP12.39□□□□□ -0.43
SEMA4D-221ENST00000537934 BICD1Q96G01 975 aa12.39□□□□□ -0.43
SEMA4D-221ENST00000537934 SAMD15Q9P1V8 674 aa12.39□□□□□ -0.43
SEMA4D-221ENST00000537934 LRRC42Q9Y546 428 aa12.39□□□□□ -0.43
SEMA4D-221ENST00000537934 BAZ2AQ9UIF9 1905 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms