RNA–Protein interactions for RNA: ENST00000537358.1

CCDC170-202, Transcript of coiled-coil domain containing 170, humanhuman

TSL 3

Gene CCDC170, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-202ENST00000537358 GRIK4Q16099 956 aa11.23□□□□□ -0.61
CCDC170-202ENST00000537358 KRT40Q6A162 431 aa11.23□□□□□ -0.61
CCDC170-202ENST00000537358 TOP1MTQ969P6 601 aa11.23□□□□□ -0.61
CCDC170-202ENST00000537358 SUGCTQ9HAC7 445 aa11.23□□□□□ -0.61
CCDC170-202ENST00000537358 RIC8AQ9NPQ8 531 aa11.23□□□□□ -0.61
CCDC170-202ENST00000537358 SLC9A2Q9UBY0 812 aa11.23□□□□□ -0.61
CCDC170-202ENST00000537358 CNTNAP5Q8WYK1 1306 aa11.23□□□□□ -0.61
CCDC170-202ENST00000537358 NLRC5Q86WI3 1866 aa11.23□□□□□ -0.61
CCDC170-202ENST00000537358 KLF18A0A0U1RQI7 1052 aa11.22□□□□□ -0.61
CCDC170-202ENST00000537358 LPXNO60711 386 aa11.22□□□□□ -0.61
CCDC170-202ENST00000537358 ATP9AO75110 1047 aa11.22□□□□□ -0.61
CCDC170-202ENST00000537358 BMP1P13497 986 aa11.22□□□□□ -0.61
CCDC170-202ENST00000537358 RCAN1P53805 252 aa11.22□□□□□ -0.61
CCDC170-202ENST00000537358 ADAM17P78536 824 aa11.22□□□□□ -0.61
CCDC170-202ENST00000537358 HTRA4P83105 476 aaPredicted RBP11.22□□□□□ -0.61
CCDC170-202ENST00000537358 AP3B2Q13367 1082 aa11.22□□□□□ -0.61
CCDC170-202ENST00000537358 TCTN1Q2MV58 587 aa11.22□□□□□ -0.61
CCDC170-202ENST00000537358 RALGAPA2Q2PPJ7 1873 aa11.22□□□□□ -0.61
CCDC170-202ENST00000537358 TSGA10IPQ3SY00 556 aa11.22□□□□□ -0.61
CCDC170-202ENST00000537358 FAM26DQ5JW98 314 aa11.22□□□□□ -0.61
CCDC170-202ENST00000537358 WWC2Q6AWC2 1192 aa11.22□□□□□ -0.61
CCDC170-202ENST00000537358 RPAINQ86UA6 219 aa11.22□□□□□ -0.61
CCDC170-202ENST00000537358 CCDC12Q8WUD4 166 aaPredicted RBP11.22□□□□□ -0.61
CCDC170-202ENST00000537358 KIF12Q96FN5 646 aa11.22□□□□□ -0.61
CCDC170-202ENST00000537358 MXRA8Q9BRK3 442 aa11.22□□□□□ -0.61
CCDC170-202ENST00000537358 KCNH7Q9NS40 1196 aa11.22□□□□□ -0.61
CCDC170-202ENST00000537358 TCEAL9Q9UHQ7 104 aa11.22□□□□□ -0.61
CCDC170-202ENST00000537358 TRPC6Q9Y210 931 aa11.22□□□□□ -0.61
CCDC170-202ENST00000537358 RWDD3Q9Y3V2 267 aa11.22□□□□□ -0.61
CCDC170-202ENST00000537358 V9GY48 417 aaPredicted RBP11.22□□□□□ -0.61
CCDC170-202ENST00000537358 NFASCO94856 1347 aa11.21□□□□□ -0.61
CCDC170-202ENST00000537358 GSTTP1A0A1W2PQM5 241 aa11.21□□□□□ -0.61
CCDC170-202ENST00000537358 SMCO2A6NFE2 343 aa11.21□□□□□ -0.61
CCDC170-202ENST00000537358 RIOK3O14730 519 aaKnown RBP11.21□□□□□ -0.61
CCDC170-202ENST00000537358 GHRP10912 638 aa11.21□□□□□ -0.61
CCDC170-202ENST00000537358 METAP2P50579 478 aaKnown RBP eCLIP11.21□□□□□ -0.61
CCDC170-202ENST00000537358 KCNQ1P51787 676 aa11.21□□□□□ -0.61
CCDC170-202ENST00000537358 IGBP1P78318 339 aa11.21□□□□□ -0.61
CCDC170-202ENST00000537358 EXOSC10Q01780 885 aaKnown RBP11.21□□□□□ -0.61
CCDC170-202ENST00000537358 AKAP17AQ02040 695 aaKnown RBP11.21□□□□□ -0.61
CCDC170-202ENST00000537358 TIGD5Q53EQ6 642 aa11.21□□□□□ -0.61
CCDC170-202ENST00000537358 CEP55Q53EZ4 464 aa11.21□□□□□ -0.61
CCDC170-202ENST00000537358 IER5Q5VY09 327 aa11.21□□□□□ -0.61
CCDC170-202ENST00000537358 MCTP2Q6DN12 878 aa11.21□□□□□ -0.61
CCDC170-202ENST00000537358 SPRED2Q7Z698 418 aa11.21□□□□□ -0.61
CCDC170-202ENST00000537358 FIBCD1Q8N539 461 aa11.21□□□□□ -0.61
CCDC170-202ENST00000537358 SP7Q8TDD2 431 aaPredicted RBP11.21□□□□□ -0.61
CCDC170-202ENST00000537358 IL17RAQ96F46 866 aa11.21□□□□□ -0.61
CCDC170-202ENST00000537358 TCEANC2Q96MN5 208 aa11.21□□□□□ -0.61
CCDC170-202ENST00000537358 C17orf80Q9BSJ5 609 aa11.21□□□□□ -0.61
CCDC170-202ENST00000537358 ANO3Q9BYT9 981 aa11.21□□□□□ -0.61
CCDC170-202ENST00000537358 BARHL2Q9NY43 387 aa11.21□□□□□ -0.61
CCDC170-202ENST00000537358 REV3LO60673 3130 aa11.21□□□□□ -0.62
CCDC170-202ENST00000537358 MBLAC1A4D2B0 266 aaPredicted RBP11.2□□□□□ -0.62
CCDC170-202ENST00000537358 STXBP3O00186 592 aa11.2□□□□□ -0.62
CCDC170-202ENST00000537358 SLC26A2P50443 739 aa11.2□□□□□ -0.62
CCDC170-202ENST00000537358 STAT5BP51692 787 aa11.2□□□□□ -0.62
CCDC170-202ENST00000537358 ACTR2P61160 394 aa11.2□□□□□ -0.62
CCDC170-202ENST00000537358 MRPS6P82932 125 aaKnown RBP11.2□□□□□ -0.62
CCDC170-202ENST00000537358 EPC2Q52LR7 807 aa11.2□□□□□ -0.62
CCDC170-202ENST00000537358 FAM160B1Q5W0V3 765 aa11.2□□□□□ -0.62
CCDC170-202ENST00000537358 RUFY4Q6ZNE9 571 aa11.2□□□□□ -0.62
CCDC170-202ENST00000537358 TSHZ1Q6ZSZ6 1077 aa11.2□□□□□ -0.62
CCDC170-202ENST00000537358 PLPPR4Q7Z2D5 763 aa11.2□□□□□ -0.62
CCDC170-202ENST00000537358 DNAJB3Q8WWF6 145 aa11.2□□□□□ -0.62
CCDC170-202ENST00000537358 MRPL38Q96DV4 380 aaKnown RBP11.2□□□□□ -0.62
CCDC170-202ENST00000537358 C1QTNF1Q9BXJ1 281 aa11.2□□□□□ -0.62
CCDC170-202ENST00000537358 FTHL17Q9BXU8 183 aa11.2□□□□□ -0.62
CCDC170-202ENST00000537358 FAM49AQ9H0Q0 323 aaPredicted RBP11.2□□□□□ -0.62
CCDC170-202ENST00000537358 TELO2Q9Y4R8 837 aa11.2□□□□□ -0.62
CCDC170-202ENST00000537358 COL4A6Q14031 1691 aa11.2□□□□□ -0.62
CCDC170-202ENST00000537358 MYH9P35579 1960 aaKnown RBP11.19□□□□□ -0.62
CCDC170-202ENST00000537358 LOXHD1Q8IVV2 1947 aa11.19□□□□□ -0.62
CCDC170-202ENST00000537358 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.19□□□□□ -0.62
CCDC170-202ENST00000537358 POTEB3A0JP26 581 aa11.19□□□□□ -0.62
CCDC170-202ENST00000537358 BACH1O14867 736 aa11.19□□□□□ -0.62
CCDC170-202ENST00000537358 REC8O95072 547 aa11.19□□□□□ -0.62
CCDC170-202ENST00000537358 CHRNA1P02708 482 aa11.19□□□□□ -0.62
CCDC170-202ENST00000537358 SCG2P13521 617 aa11.19□□□□□ -0.62
CCDC170-202ENST00000537358 INSRRP14616 1297 aa11.19□□□□□ -0.62
CCDC170-202ENST00000537358 PSMA5P28066 241 aa11.19□□□□□ -0.62
CCDC170-202ENST00000537358 GNA11P29992 359 aa11.19□□□□□ -0.62
CCDC170-202ENST00000537358 SREBF1P36956 1147 aa11.19□□□□□ -0.62
CCDC170-202ENST00000537358 GPM6BQ13491 265 aa11.19□□□□□ -0.62
CCDC170-202ENST00000537358 COL9A3Q14050 684 aaPredicted RBP11.19□□□□□ -0.62
CCDC170-202ENST00000537358 ADCK5Q3MIX3 580 aa11.19□□□□□ -0.62
CCDC170-202ENST00000537358 BLOC1S2Q6QNY1 142 aa11.19□□□□□ -0.62
CCDC170-202ENST00000537358 POTEBQ6S5H4 581 aa11.19□□□□□ -0.62
CCDC170-202ENST00000537358 NIPA1Q7RTP0 329 aa11.19□□□□□ -0.62
CCDC170-202ENST00000537358 TMEM192Q8IY95 271 aa11.19□□□□□ -0.62
CCDC170-202ENST00000537358 BICD2Q8TD16 824 aa11.19□□□□□ -0.62
CCDC170-202ENST00000537358 PGBD1Q96JS3 809 aa11.19□□□□□ -0.62
CCDC170-202ENST00000537358 JAKMIP1Q96N16 626 aaKnown RBP11.19□□□□□ -0.62
CCDC170-202ENST00000537358 UBE2ZQ9H832 354 aaPredicted RBP11.19□□□□□ -0.62
CCDC170-202ENST00000537358 AGO4Q9HCK5 861 aaKnown RBP11.19□□□□□ -0.62
CCDC170-202ENST00000537358 C6orf50Q9HD87 102 aa11.19□□□□□ -0.62
CCDC170-202ENST00000537358 BRPF3Q9ULD4 1205 aa11.19□□□□□ -0.62
CCDC170-202ENST00000537358 CDY2AQ9Y6F7 541 aa11.19□□□□□ -0.62
CCDC170-202ENST00000537358 SQORQ9Y6N5 450 aa11.19□□□□□ -0.62
CCDC170-202ENST00000537358 BDP1A6H8Y1 2624 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms