RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 FOXB2Q5VYV0 432 aa8.26□□□□□ -1.09
CCDC7-208ENST00000537047 DBPQ10586 325 aaPredicted RBP8.25□□□□□ -1.09
CCDC7-208ENST00000537047 BTBD8Q5XKL5 378 aa8.25□□□□□ -1.09
CCDC7-208ENST00000537047 TAX1BP1Q86VP1 789 aa8.25□□□□□ -1.09
CCDC7-208ENST00000537047 LRRC47Q8N1G4 583 aaKnown RBP8.25□□□□□ -1.09
CCDC7-208ENST00000537047 ALG1Q9BT22 464 aa8.25□□□□□ -1.09
CCDC7-208ENST00000537047 SPATA9Q9BWV2 254 aa8.25□□□□□ -1.09
CCDC7-208ENST00000537047 ESYT3A0FGR9 886 aa8.24□□□□□ -1.09
CCDC7-208ENST00000537047 CYR61O00622 381 aa8.24□□□□□ -1.09
CCDC7-208ENST00000537047 ADCY3O60266 1144 aa8.24□□□□□ -1.09
CCDC7-208ENST00000537047 RRADP55042 308 aa8.24□□□□□ -1.09
CCDC7-208ENST00000537047 ARHGAP36Q6ZRI8 547 aa8.24□□□□□ -1.09
CCDC7-208ENST00000537047 MRIQ9BWK5 157 aa8.24□□□□□ -1.09
CCDC7-208ENST00000537047 SEC61A2Q9H9S3 476 aa8.24□□□□□ -1.09
CCDC7-208ENST00000537047 PFDN2Q9UHV9 154 aa8.24□□□□□ -1.09
CCDC7-208ENST00000537047 ZFR2Q9UPR6 939 aaKnown RBP8.24□□□□□ -1.09
CCDC7-208ENST00000537047 NUB1Q9Y5A7 615 aa8.24□□□□□ -1.09
CCDC7-208ENST00000537047 PCDHA8Q9Y5H6 950 aa8.24□□□□□ -1.09
CCDC7-208ENST00000537047 KCNK3O14649 394 aa8.23□□□□□ -1.09
CCDC7-208ENST00000537047 AMY2AP04746 511 aa8.23□□□□□ -1.09
CCDC7-208ENST00000537047 PTPN1P18031 435 aaKnown RBP8.23□□□□□ -1.09
CCDC7-208ENST00000537047 AMY2BP19961 511 aa8.23□□□□□ -1.09
CCDC7-208ENST00000537047 USP10Q14694 798 aaKnown RBP8.23□□□□□ -1.09
CCDC7-208ENST00000537047 RNF151Q2KHN1 245 aa8.23□□□□□ -1.09
CCDC7-208ENST00000537047 FAM209AQ5JX71 171 aa8.23□□□□□ -1.09
CCDC7-208ENST00000537047 OSTM1Q86WC4 334 aa8.23□□□□□ -1.09
CCDC7-208ENST00000537047 PTRH1Q86Y79 214 aaKnown RBP8.23□□□□□ -1.09
CCDC7-208ENST00000537047 GIMAP8Q8ND71 665 aaPredicted RBP8.23□□□□□ -1.09
CCDC7-208ENST00000537047 NEIL1Q96FI4 390 aaPredicted RBP8.23□□□□□ -1.09
CCDC7-208ENST00000537047 RIC8BQ9NVN3 520 aa8.23□□□□□ -1.09
CCDC7-208ENST00000537047 CBLCQ9ULV8 474 aa8.23□□□□□ -1.09
CCDC7-208ENST00000537047 SRPK3Q9UPE1 567 aa8.23□□□□□ -1.09
CCDC7-208ENST00000537047 HS3ST3A1Q9Y663 406 aa8.23□□□□□ -1.09
CCDC7-208ENST00000537047 MAN2B1O00754 1011 aa8.22□□□□□ -1.09
CCDC7-208ENST00000537047 FZD7O75084 574 aa8.22□□□□□ -1.09
CCDC7-208ENST00000537047 C6orf222P0C671 652 aaPredicted RBP8.22□□□□□ -1.09
CCDC7-208ENST00000537047 PYGMP11217 842 aa8.22□□□□□ -1.09
CCDC7-208ENST00000537047 PAK1Q13153 545 aa8.22□□□□□ -1.09
CCDC7-208ENST00000537047 MTDHQ86UE4 582 aaKnown RBP8.22□□□□□ -1.09
CCDC7-208ENST00000537047 REXO1L1PQ8IX06 675 aa8.22□□□□□ -1.09
CCDC7-208ENST00000537047 PCDH19Q8TAB3 1148 aa8.22□□□□□ -1.09
CCDC7-208ENST00000537047 TRIM55Q9BYV6 548 aa8.22□□□□□ -1.09
CCDC7-208ENST00000537047 CCDC85CA6NKD9 419 aa8.21□□□□□ -1.1
CCDC7-208ENST00000537047 SRGAP2CP0DJJ0 459 aa8.21□□□□□ -1.1
CCDC7-208ENST00000537047 PDE6AP16499 860 aa8.21□□□□□ -1.1
CCDC7-208ENST00000537047 KRT15P19012 456 aa8.21□□□□□ -1.1
CCDC7-208ENST00000537047 TOP3AQ13472 1001 aaPredicted RBP8.21□□□□□ -1.1
CCDC7-208ENST00000537047 IFNL2Q8IZJ0 200 aa8.21□□□□□ -1.1
CCDC7-208ENST00000537047 FUKQ8N0W3 1084 aa8.21□□□□□ -1.1
CCDC7-208ENST00000537047 CATSPERZQ9NTU4 200 aa8.21□□□□□ -1.1
CCDC7-208ENST00000537047 ING1Q9UK53 422 aaPredicted RBP8.21□□□□□ -1.1
CCDC7-208ENST00000537047 MSRB2Q9Y3D2 182 aa8.21□□□□□ -1.1
CCDC7-208ENST00000537047 DIAPH1O60610 1272 aaKnown RBP8.2□□□□□ -1.1
CCDC7-208ENST00000537047 POLD1P28340 1107 aa8.2□□□□□ -1.1
CCDC7-208ENST00000537047 MC4RP32245 332 aa8.2□□□□□ -1.1
CCDC7-208ENST00000537047 JAM2P57087 298 aa8.2□□□□□ -1.1
CCDC7-208ENST00000537047 KLF10Q13118 480 aa8.2□□□□□ -1.1
CCDC7-208ENST00000537047 TBR1Q16650 682 aa8.2□□□□□ -1.1
CCDC7-208ENST00000537047 ADOQ96SZ5 270 aa8.2□□□□□ -1.1
CCDC7-208ENST00000537047 DPYSL5Q9BPU6 564 aa8.2□□□□□ -1.1
CCDC7-208ENST00000537047 CARD11Q9BXL7 1154 aa8.2□□□□□ -1.1
CCDC7-208ENST00000537047 PCED1AQ9H1Q7 454 aa8.2□□□□□ -1.1
CCDC7-208ENST00000537047 TESMINQ9Y4I5 508 aa8.2□□□□□ -1.1
CCDC7-208ENST00000537047 ADCY8P40145 1251 aa8.19□□□□□ -1.1
CCDC7-208ENST00000537047 RBM25P49756 843 aaKnown RBP8.19□□□□□ -1.1
CCDC7-208ENST00000537047 IL13RA1P78552 427 aa8.19□□□□□ -1.1
CCDC7-208ENST00000537047 GPR19Q15760 415 aa8.19□□□□□ -1.1
CCDC7-208ENST00000537047 IGFL4Q6B9Z1 124 aa8.19□□□□□ -1.1
CCDC7-208ENST00000537047 SEMA4AQ9H3S1 761 aa8.19□□□□□ -1.1
CCDC7-208ENST00000537047 ARHGAP28Q9P2N2 729 aa8.19□□□□□ -1.1
CCDC7-208ENST00000537047 PCDHA9Q9Y5H5 950 aa8.19□□□□□ -1.1
CCDC7-208ENST00000537047 TRBV23-1A0A0A0MS06 115 aa8.18□□□□□ -1.1
CCDC7-208ENST00000537047 OVOL3O00110 214 aa8.18□□□□□ -1.1
CCDC7-208ENST00000537047 MATN2O00339 956 aa8.18□□□□□ -1.1
CCDC7-208ENST00000537047 PLSCR1O15162 318 aa8.18□□□□□ -1.1
CCDC7-208ENST00000537047 PDPK1O15530 556 aa8.18□□□□□ -1.1
CCDC7-208ENST00000537047 SEC23AQ15436 765 aa8.18□□□□□ -1.1
CCDC7-208ENST00000537047 AGBL4Q5VU57 503 aa8.18□□□□□ -1.1
CCDC7-208ENST00000537047 SCUBE1Q8IWY4 988 aa8.18□□□□□ -1.1
CCDC7-208ENST00000537047 PTPRN2Q92932 1015 aa8.18□□□□□ -1.1
CCDC7-208ENST00000537047 FBXW5Q969U6 566 aa8.18□□□□□ -1.1
CCDC7-208ENST00000537047 EXOC2Q96KP1 924 aa8.18□□□□□ -1.1
CCDC7-208ENST00000537047 CDC6Q99741 560 aa8.18□□□□□ -1.1
CCDC7-208ENST00000537047 MENTQ9BUN1 341 aa8.18□□□□□ -1.1
CCDC7-208ENST00000537047 IGSF5Q9NSI5 407 aa8.18□□□□□ -1.1
CCDC7-208ENST00000537047 AQP7O14520 342 aa8.17□□□□□ -1.1
CCDC7-208ENST00000537047 WNT9AO14904 365 aa8.17□□□□□ -1.1
CCDC7-208ENST00000537047 FAM153BP0C7A2 387 aa8.17□□□□□ -1.1
CCDC7-208ENST00000537047 RAC3P60763 192 aa8.17□□□□□ -1.1
CCDC7-208ENST00000537047 GUCY1A3Q02108 690 aa8.17□□□□□ -1.1
CCDC7-208ENST00000537047 SSRP1Q08945 709 aaKnown RBP8.17□□□□□ -1.1
CCDC7-208ENST00000537047 WDR72Q3MJ13 1102 aa8.17□□□□□ -1.1
CCDC7-208ENST00000537047 MTERF2Q49AM1 385 aa8.17□□□□□ -1.1
CCDC7-208ENST00000537047 FSTL4Q6MZW2 842 aa8.17□□□□□ -1.1
CCDC7-208ENST00000537047 LARP4Q71RC2 724 aaKnown RBP eCLIP8.17□□□□□ -1.1
CCDC7-208ENST00000537047 KIAA1683Q9H0B3 1180 aa8.17□□□□□ -1.1
CCDC7-208ENST00000537047 SMURF1Q9HCE7 757 aa8.17□□□□□ -1.1
CCDC7-208ENST00000537047 CDC42EP3Q9UKI2 254 aa8.17□□□□□ -1.1
CCDC7-208ENST00000537047 ATP23Q9Y6H3 246 aa8.17□□□□□ -1.1
CCDC7-208ENST00000537047 NPIPB8E9PQR5 432 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms