RNA–Protein interactions for RNA: ENST00000537024.5

SNHG1-203, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 532 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-203ENST00000537024 C1GALT1Q9NS00 363 aa5.27□□□□□ -1.57
SNHG1-203ENST00000537024 CHST7Q9NS84 486 aa5.27□□□□□ -1.57
SNHG1-203ENST00000537024 HOMER2Q9NSB8 354 aa5.27□□□□□ -1.57
SNHG1-203ENST00000537024 TYW1Q9NV66 732 aaKnown RBP5.27□□□□□ -1.57
SNHG1-203ENST00000537024 KLHL42Q9P2K6 505 aa5.27□□□□□ -1.57
SNHG1-203ENST00000537024 MCM8Q9UJA3 840 aa5.27□□□□□ -1.57
SNHG1-203ENST00000537024 ANKRD26Q9UPS8 1709 aa5.27□□□□□ -1.57
SNHG1-203ENST00000537024 ATP8A1Q9Y2Q0 1164 aa5.27□□□□□ -1.57
SNHG1-203ENST00000537024 GPR55Q9Y2T6 319 aaPredicted RBP5.27□□□□□ -1.57
SNHG1-203ENST00000537024 A0A1W2PPC1 479 aa5.26□□□□□ -1.57
SNHG1-203ENST00000537024 GSG1L2A8MUP6 293 aa5.26□□□□□ -1.57
SNHG1-203ENST00000537024 FZD9O00144 591 aa5.26□□□□□ -1.57
SNHG1-203ENST00000537024 MEIS1O00470 390 aa5.26□□□□□ -1.57
SNHG1-203ENST00000537024 SIGLEC6O43699 453 aa5.26□□□□□ -1.57
SNHG1-203ENST00000537024 VAMP4O75379 141 aa5.26□□□□□ -1.57
SNHG1-203ENST00000537024 LEFTY1O75610 366 aa5.26□□□□□ -1.57
SNHG1-203ENST00000537024 S100BP04271 92 aaPredicted RBP5.26□□□□□ -1.57
SNHG1-203ENST00000537024 PDGFRBP09619 1106 aa5.26□□□□□ -1.57
SNHG1-203ENST00000537024 C6orf222P0C671 652 aaPredicted RBP5.26□□□□□ -1.57
SNHG1-203ENST00000537024 FAM87AP0C7U9 286 aa5.26□□□□□ -1.57
SNHG1-203ENST00000537024 CPEP16870 476 aa5.26□□□□□ -1.57
SNHG1-203ENST00000537024 SDSP20132 328 aa5.26□□□□□ -1.57
SNHG1-203ENST00000537024 ECI1P42126 302 aa5.26□□□□□ -1.57
SNHG1-203ENST00000537024 HUNKP57058 714 aa5.26□□□□□ -1.57
SNHG1-203ENST00000537024 NMIQ13287 307 aaPredicted RBP5.26□□□□□ -1.57
SNHG1-203ENST00000537024 SF1Q15637 639 aaKnown RBP5.26□□□□□ -1.57
SNHG1-203ENST00000537024 CLEC16AQ2KHT3 1053 aa5.26□□□□□ -1.57
SNHG1-203ENST00000537024 DPY19L1Q2PZI1 675 aa5.26□□□□□ -1.57
SNHG1-203ENST00000537024 CWF19L1Q69YN2 538 aaKnown RBP5.26□□□□□ -1.57
SNHG1-203ENST00000537024 WWC2Q6AWC2 1192 aa5.26□□□□□ -1.57
SNHG1-203ENST00000537024 BEND4Q6ZU67 534 aa5.26□□□□□ -1.57
SNHG1-203ENST00000537024 USP50Q70EL3 339 aaPredicted RBP5.26□□□□□ -1.57
SNHG1-203ENST00000537024 BRAPQ7Z569 592 aa5.26□□□□□ -1.57
SNHG1-203ENST00000537024 NBPF11Q86T75 865 aa5.26□□□□□ -1.57
SNHG1-203ENST00000537024 RNF180Q86T96 592 aa5.26□□□□□ -1.57
SNHG1-203ENST00000537024 TXNRD3Q86VQ6 643 aa5.26□□□□□ -1.57
SNHG1-203ENST00000537024 JAMLQ86YT9 394 aa5.26□□□□□ -1.57
SNHG1-203ENST00000537024 AHI1Q8N157 1196 aa5.26□□□□□ -1.57
SNHG1-203ENST00000537024 PPM1KQ8N3J5 372 aa5.26□□□□□ -1.57
SNHG1-203ENST00000537024 PRPF38AQ8NAV1 312 aaKnown RBP5.26□□□□□ -1.57
SNHG1-203ENST00000537024 DTWD2Q8NBA8 298 aa5.26□□□□□ -1.57
SNHG1-203ENST00000537024 PTPRN2Q92932 1015 aa5.26□□□□□ -1.57
SNHG1-203ENST00000537024 CEP89Q96ST8 783 aa5.26□□□□□ -1.57
SNHG1-203ENST00000537024 GLIS2Q9BZE0 524 aaPredicted RBP5.26□□□□□ -1.57
SNHG1-203ENST00000537024 IRF2BPLQ9H1B7 796 aa5.26□□□□□ -1.57
SNHG1-203ENST00000537024 SLC52A2Q9HAB3 445 aa5.26□□□□□ -1.57
SNHG1-203ENST00000537024 CYP26B1Q9NR63 512 aa5.26□□□□□ -1.57
SNHG1-203ENST00000537024 ATG3Q9NT62 314 aa5.26□□□□□ -1.57
SNHG1-203ENST00000537024 GTF2IRD1Q9UHL9 959 aa5.26□□□□□ -1.57
SNHG1-203ENST00000537024 COL4A5P29400 1685 aa5.26□□□□□ -1.57
SNHG1-203ENST00000537024 LAMA2P24043 3122 aaKnown RBP5.26□□□□□ -1.57
SNHG1-203ENST00000537024 EYSQ5T1H1 3165 aa5.26□□□□□ -1.57
SNHG1-203ENST00000537024 PIEZO1Q92508 2521 aa5.26□□□□□ -1.57
SNHG1-203ENST00000537024 PRUNE2Q8WUY3 3088 aa5.25□□□□□ -1.57
SNHG1-203ENST00000537024 BLACEA4D250 179 aa5.25□□□□□ -1.57
SNHG1-203ENST00000537024 OPA1O60313 960 aa5.25□□□□□ -1.57
SNHG1-203ENST00000537024 PRAMEF1O95521 474 aa5.25□□□□□ -1.57
SNHG1-203ENST00000537024 EPS15P42566 896 aa5.25□□□□□ -1.57
SNHG1-203ENST00000537024 NFIXQ14938 502 aa5.25□□□□□ -1.57
SNHG1-203ENST00000537024 RGMBQ6NW40 437 aa5.25□□□□□ -1.57
SNHG1-203ENST00000537024 USP53Q70EK8 1073 aa5.25□□□□□ -1.57
SNHG1-203ENST00000537024 MAMDC2Q7Z304 686 aaPredicted RBP5.25□□□□□ -1.57
SNHG1-203ENST00000537024 DDX42Q86XP3 938 aaKnown RBP eCLIP5.25□□□□□ -1.577e-6■■■□□ 16.5
SNHG1-203ENST00000537024 CLEC10AQ8IUN9 316 aa5.25□□□□□ -1.57
SNHG1-203ENST00000537024 DEFB123Q8N688 67 aa5.25□□□□□ -1.57
SNHG1-203ENST00000537024 TMEM145Q8NBT3 493 aa5.25□□□□□ -1.57
SNHG1-203ENST00000537024 SLC7A14Q8TBB6 771 aa5.25□□□□□ -1.57
SNHG1-203ENST00000537024 STAG1Q8WVM7 1258 aa5.25□□□□□ -1.57
SNHG1-203ENST00000537024 RAPGEF4Q8WZA2 1011 aa5.25□□□□□ -1.57
SNHG1-203ENST00000537024 DDX1Q92499 740 aaKnown RBP5.25□□□□□ -1.57
SNHG1-203ENST00000537024 ZNF622Q969S3 477 aaKnown RBP eCLIP5.25□□□□□ -1.57
SNHG1-203ENST00000537024 Q96M66 194 aa5.25□□□□□ -1.57
SNHG1-203ENST00000537024 TBC1D32Q96NH3 1257 aa5.25□□□□□ -1.57
SNHG1-203ENST00000537024 GOLGA2P5Q9HBQ8 144 aa5.25□□□□□ -1.57
SNHG1-203ENST00000537024 TRIM39Q9HCM9 518 aa5.25□□□□□ -1.57
SNHG1-203ENST00000537024 ZNF277Q9NRM2 450 aaPredicted RBP5.25□□□□□ -1.57
SNHG1-203ENST00000537024 TMOD3Q9NYL9 352 aa5.25□□□□□ -1.57
SNHG1-203ENST00000537024 KTN1Q86UP2 1357 aaKnown RBP5.25□□□□□ -1.57
SNHG1-203ENST00000537024 GNAT3A8MTJ3 354 aa5.24□□□□□ -1.57
SNHG1-203ENST00000537024 H0Y8X5 98 aa5.24□□□□□ -1.57
SNHG1-203ENST00000537024 DNAJC8O75937 253 aaPredicted RBP5.24□□□□□ -1.57
SNHG1-203ENST00000537024 ASLP04424 464 aa5.24□□□□□ -1.57
SNHG1-203ENST00000537024 SERPINB2P05120 415 aa5.24□□□□□ -1.57
SNHG1-203ENST00000537024 SCG5P05408 212 aa5.24□□□□□ -1.57
SNHG1-203ENST00000537024 GSNP06396 782 aa5.24□□□□□ -1.57
SNHG1-203ENST00000537024 CD3EP07766 207 aa5.24□□□□□ -1.57
SNHG1-203ENST00000537024 HOXC9P31274 260 aa5.24□□□□□ -1.57
SNHG1-203ENST00000537024 FLT3P36888 993 aa5.24□□□□□ -1.57
SNHG1-203ENST00000537024 CDKN1CP49918 316 aaPredicted RBP5.24□□□□□ -1.57
SNHG1-203ENST00000537024 NEK4P51957 841 aa5.24□□□□□ -1.57
SNHG1-203ENST00000537024 SCRN1Q12765 414 aa5.24□□□□□ -1.57
SNHG1-203ENST00000537024 PRSS53Q2L4Q9 553 aa5.24□□□□□ -1.57
SNHG1-203ENST00000537024 CYP27C1Q4G0S4 372 aa5.24□□□□□ -1.57
SNHG1-203ENST00000537024 NOL8Q76FK4 1167 aaKnown RBP5.24□□□□□ -1.57
SNHG1-203ENST00000537024 DDX46Q7L014 1031 aaKnown RBP5.24□□□□□ -1.57
SNHG1-203ENST00000537024 Q7L0L9 218 aa5.24□□□□□ -1.57
SNHG1-203ENST00000537024 NME9Q86XW9 330 aa5.24□□□□□ -1.57
SNHG1-203ENST00000537024 USHBP1Q8N6Y0 703 aa5.24□□□□□ -1.57
SNHG1-203ENST00000537024 GSTCDQ8NEC7 633 aa5.24□□□□□ -1.57
SNHG1-203ENST00000537024 ATL2Q8NHH9 583 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms