RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 IGBP1P78318 339 aa22.49■■□□□ 1.19
TNFRSF1B-204ENST00000536782 GPM6BQ13491 265 aa22.49■■□□□ 1.19
TNFRSF1B-204ENST00000536782 LPIN1Q14693 890 aa22.49■■□□□ 1.19
TNFRSF1B-204ENST00000536782 TSGA10IPQ3SY00 556 aa22.49■■□□□ 1.19
TNFRSF1B-204ENST00000536782 TYW1BQ6NUM6 668 aa22.49■■□□□ 1.19
TNFRSF1B-204ENST00000536782 CENPQQ7L2Z9 268 aaPredicted RBP22.49■■□□□ 1.19
TNFRSF1B-204ENST00000536782 ZNF713Q8N859 430 aaPredicted RBP22.49■■□□□ 1.19
TNFRSF1B-204ENST00000536782 TNPO1Q92973 898 aaKnown RBP22.49■■□□□ 1.19
TNFRSF1B-204ENST00000536782 IL17RAQ96F46 866 aa22.49■■□□□ 1.19
TNFRSF1B-204ENST00000536782 SDF4Q9BRK5 362 aa22.49■■□□□ 1.19
TNFRSF1B-204ENST00000536782 C1QTNF1Q9BXJ1 281 aa22.49■■□□□ 1.19
TNFRSF1B-204ENST00000536782 V9GY48 417 aaPredicted RBP22.49■■□□□ 1.19
TNFRSF1B-204ENST00000536782 COL4A6Q14031 1691 aa22.49■■□□□ 1.19
TNFRSF1B-204ENST00000536782 RALGAPA2Q2PPJ7 1873 aa22.48■■□□□ 1.19
TNFRSF1B-204ENST00000536782 RPLP2P05387 115 aaKnown RBP22.48■■□□□ 1.19
TNFRSF1B-204ENST00000536782 INSRRP14616 1297 aa22.48■■□□□ 1.19
TNFRSF1B-204ENST00000536782 ADCY7P51828 1080 aa22.48■■□□□ 1.19
TNFRSF1B-204ENST00000536782 FUT2Q10981 343 aa22.48■■□□□ 1.19
TNFRSF1B-204ENST00000536782 FBXO47Q5MNV8 452 aa22.48■■□□□ 1.19
TNFRSF1B-204ENST00000536782 SKAP1Q86WV1 359 aa22.48■■□□□ 1.19
TNFRSF1B-204ENST00000536782 CYP2W1Q8TAV3 490 aa22.48■■□□□ 1.19
TNFRSF1B-204ENST00000536782 PGBD1Q96JS3 809 aa22.48■■□□□ 1.19
TNFRSF1B-204ENST00000536782 PCYT2Q99447 389 aa22.48■■□□□ 1.19
TNFRSF1B-204ENST00000536782 LOXHD1Q8IVV2 1947 aa22.48■■□□□ 1.19
TNFRSF1B-204ENST00000536782 NFASCO94856 1347 aa22.48■■□□□ 1.19
TNFRSF1B-204ENST00000536782 SMCO2A6NFE2 343 aa22.47■■□□□ 1.19
TNFRSF1B-204ENST00000536782 GOLGA8AA7E2F4 631 aa22.47■■□□□ 1.19
TNFRSF1B-204ENST00000536782 GOLGA8BA8MQT2 603 aa22.47■■□□□ 1.19
TNFRSF1B-204ENST00000536782 KRT32Q14532 448 aa22.47■■□□□ 1.19
TNFRSF1B-204ENST00000536782 ADCK5Q3MIX3 580 aa22.47■■□□□ 1.19
TNFRSF1B-204ENST00000536782 TIGD5Q53EQ6 642 aa22.47■■□□□ 1.19
TNFRSF1B-204ENST00000536782 CEP55Q53EZ4 464 aa22.47■■□□□ 1.19
TNFRSF1B-204ENST00000536782 RASEFQ8IZ41 740 aa22.47■■□□□ 1.19
TNFRSF1B-204ENST00000536782 FIBCD1Q8N539 461 aa22.47■■□□□ 1.19
TNFRSF1B-204ENST00000536782 KHSRPQ92945 711 aaKnown RBP eCLIP22.47■■□□□ 1.19
TNFRSF1B-204ENST00000536782 ANO3Q9BYT9 981 aa22.47■■□□□ 1.19
TNFRSF1B-204ENST00000536782 GLT8D2Q9H1C3 349 aa22.47■■□□□ 1.19
TNFRSF1B-204ENST00000536782 EPHX3Q9H6B9 360 aa22.47■■□□□ 1.19
TNFRSF1B-204ENST00000536782 TRPC6Q9Y210 931 aa22.47■■□□□ 1.19
TNFRSF1B-204ENST00000536782 CDY2AQ9Y6F7 541 aa22.47■■□□□ 1.19
TNFRSF1B-204ENST00000536782 KLF18A0A0U1RQI7 1052 aa22.46■■□□□ 1.19
TNFRSF1B-204ENST00000536782 STXBP3O00186 592 aa22.46■■□□□ 1.19
TNFRSF1B-204ENST00000536782 ENPP3O14638 875 aa22.46■■□□□ 1.19
TNFRSF1B-204ENST00000536782 ARP10275 920 aa22.46■■□□□ 1.19
TNFRSF1B-204ENST00000536782 KCNA5P22460 613 aa22.46■■□□□ 1.19
TNFRSF1B-204ENST00000536782 ACTR2P61160 394 aa22.46■■□□□ 1.19
TNFRSF1B-204ENST00000536782 MRPS6P82932 125 aaKnown RBP22.46■■□□□ 1.19
TNFRSF1B-204ENST00000536782 LEXMQ3ZCV2 418 aa22.46■■□□□ 1.19
TNFRSF1B-204ENST00000536782 IER5Q5VY09 327 aa22.46■■□□□ 1.19
TNFRSF1B-204ENST00000536782 TSHZ1Q6ZSZ6 1077 aa22.46■■□□□ 1.19
TNFRSF1B-204ENST00000536782 PLPPR4Q7Z2D5 763 aa22.46■■□□□ 1.19
TNFRSF1B-204ENST00000536782 FAM49AQ9H0Q0 323 aaPredicted RBP22.46■■□□□ 1.19
TNFRSF1B-204ENST00000536782 BARHL2Q9NY43 387 aa22.46■■□□□ 1.19
TNFRSF1B-204ENST00000536782 CDC45O75419 566 aa22.45■■□□□ 1.18
TNFRSF1B-204ENST00000536782 HMGB1P09429 215 aaKnown RBP22.45■■□□□ 1.18
TNFRSF1B-204ENST00000536782 STAT5BP51692 787 aa22.45■■□□□ 1.18
TNFRSF1B-204ENST00000536782 RCAN1P53805 252 aa22.45■■□□□ 1.18
TNFRSF1B-204ENST00000536782 AP3B2Q13367 1082 aa22.45■■□□□ 1.18
TNFRSF1B-204ENST00000536782 BANK1Q8NDB2 785 aa22.45■■□□□ 1.18
TNFRSF1B-204ENST00000536782 ZBTB10Q96DT7 871 aa22.45■■□□□ 1.18
TNFRSF1B-204ENST00000536782 AGO4Q9HCK5 861 aaKnown RBP22.45■■□□□ 1.18
TNFRSF1B-204ENST00000536782 CD320Q9NPF0 282 aa22.45■■□□□ 1.18
TNFRSF1B-204ENST00000536782 M0QZ92 97 aa22.44■■□□□ 1.18
TNFRSF1B-204ENST00000536782 MEIS1O00470 390 aa22.44■■□□□ 1.18
TNFRSF1B-204ENST00000536782 ZNF76P36508 570 aa22.44■■□□□ 1.18
TNFRSF1B-204ENST00000536782 SREBF1P36956 1147 aa22.44■■□□□ 1.18
TNFRSF1B-204ENST00000536782 TTC3P53804 2025 aa22.44■■□□□ 1.18
TNFRSF1B-204ENST00000536782 ITGB3BPQ13352 177 aaPredicted RBP22.44■■□□□ 1.18
TNFRSF1B-204ENST00000536782 PLCB4Q15147 1175 aa22.44■■□□□ 1.18
TNFRSF1B-204ENST00000536782 C5orf42Q9H799 3197 aa22.44■■□□□ 1.18
TNFRSF1B-204ENST00000536782 FAM217BQ9NTX9 383 aaPredicted RBP22.44■■□□□ 1.18
TNFRSF1B-204ENST00000536782 TMEM260Q9NX78 707 aa22.44■■□□□ 1.18
TNFRSF1B-204ENST00000536782 NAP1L2Q9ULW6 460 aaPredicted RBP22.44■■□□□ 1.18
TNFRSF1B-204ENST00000536782 RWDD3Q9Y3V2 267 aa22.44■■□□□ 1.18
TNFRSF1B-204ENST00000536782 SQORQ9Y6N5 450 aa22.44■■□□□ 1.18
TNFRSF1B-204ENST00000536782 ADGRA3Q8IWK6 1321 aa22.43■■□□□ 1.18
TNFRSF1B-204ENST00000536782 C5orf67F2Z3F1 127 aa22.43■■□□□ 1.18
TNFRSF1B-204ENST00000536782 RB1P06400 928 aa22.43■■□□□ 1.18
TNFRSF1B-204ENST00000536782 CDC27P30260 824 aa22.43■■□□□ 1.18
TNFRSF1B-204ENST00000536782 CTNNB1P35222 781 aa22.43■■□□□ 1.18
TNFRSF1B-204ENST00000536782 CLK2P49760 499 aaKnown RBP22.43■■□□□ 1.18
TNFRSF1B-204ENST00000536782 FGD1P98174 961 aa22.43■■□□□ 1.18
TNFRSF1B-204ENST00000536782 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.43■■□□□ 1.18
TNFRSF1B-204ENST00000536782 NSUN3Q9H649 340 aaKnown RBP22.43■■□□□ 1.18
TNFRSF1B-204ENST00000536782 AGO3Q9H9G7 860 aaKnown RBP22.43■■□□□ 1.18
TNFRSF1B-204ENST00000536782 PCDHA2Q9Y5H9 948 aa22.43■■□□□ 1.18
TNFRSF1B-204ENST00000536782 POTEB3A0JP26 581 aa22.42■■□□□ 1.18
TNFRSF1B-204ENST00000536782 ATG7O95352 703 aa22.42■■□□□ 1.18
TNFRSF1B-204ENST00000536782 CD52P31358 61 aa22.42■■□□□ 1.18
TNFRSF1B-204ENST00000536782 BMPR1AP36894 532 aa22.42■■□□□ 1.18
TNFRSF1B-204ENST00000536782 SLC26A2P50443 739 aa22.42■■□□□ 1.18
TNFRSF1B-204ENST00000536782 TCEAL5Q5H9L2 206 aa22.42■■□□□ 1.18
TNFRSF1B-204ENST00000536782 POTEBQ6S5H4 581 aa22.42■■□□□ 1.18
TNFRSF1B-204ENST00000536782 TRAPPC12Q8WVT3 735 aa22.42■■□□□ 1.18
TNFRSF1B-204ENST00000536782 C11orf84Q9BUA3 381 aaPredicted RBP22.42■■□□□ 1.18
TNFRSF1B-204ENST00000536782 FTHL17Q9BXU8 183 aa22.42■■□□□ 1.18
TNFRSF1B-204ENST00000536782 RC3H2Q9HBD1 1191 aaKnown RBP22.42■■□□□ 1.18
TNFRSF1B-204ENST00000536782 TRPV2Q9Y5S1 764 aa22.42■■□□□ 1.18
TNFRSF1B-204ENST00000536782 CCDC196A0A1B0GTZ2 297 aa22.41■■□□□ 1.18
TNFRSF1B-204ENST00000536782 TMEM62Q0P6H9 643 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms