RNA–Protein interactions for RNA: ENST00000536613.6

CACNB1-205, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 4

Gene CACNB1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-205ENST00000536613 PLA2G4DQ86XP0 818 aa20.9■□□□□ 0.94
CACNB1-205ENST00000536613 ZBED2Q9BTP6 218 aa20.9■□□□□ 0.94
CACNB1-205ENST00000536613 PDRG1Q9NUG6 133 aa20.9■□□□□ 0.94
CACNB1-205ENST00000536613 VPS54Q9P1Q0 977 aa20.9■□□□□ 0.94
CACNB1-205ENST00000536613 TUBE1Q9UJT0 475 aa20.9■□□□□ 0.94
CACNB1-205ENST00000536613 ARHGEF15O94989 841 aa20.89■□□□□ 0.93
CACNB1-205ENST00000536613 GJB5O95377 273 aa20.89■□□□□ 0.93
CACNB1-205ENST00000536613 CCNE2O96020 404 aa20.89■□□□□ 0.93
CACNB1-205ENST00000536613 IGFBP4P22692 258 aa20.89■□□□□ 0.93
CACNB1-205ENST00000536613 MARCH8Q5T0T0 291 aa20.89■□□□□ 0.93
CACNB1-205ENST00000536613 PLPPR4Q7Z2D5 763 aa20.89■□□□□ 0.93
CACNB1-205ENST00000536613 TRIM22Q8IYM9 498 aa20.89■□□□□ 0.93
CACNB1-205ENST00000536613 RASGRP4Q8TDF6 673 aa20.89■□□□□ 0.93
CACNB1-205ENST00000536613 SEPT8Q92599 483 aa20.89■□□□□ 0.93
CACNB1-205ENST00000536613 LARP6Q9BRS8 491 aaKnown RBP20.89■□□□□ 0.93
CACNB1-205ENST00000536613 OSBPL7Q9BZF2 842 aa20.89■□□□□ 0.93
CACNB1-205ENST00000536613 SH3GLB2Q9NR46 395 aa20.89■□□□□ 0.93
CACNB1-205ENST00000536613 TRANK1O15050 2925 aa20.89■□□□□ 0.93
CACNB1-205ENST00000536613 RRN3P2A6NIE6 340 aa20.88■□□□□ 0.93
CACNB1-205ENST00000536613 IPO5O00410 1097 aaKnown RBP20.88■□□□□ 0.93
CACNB1-205ENST00000536613 CPLX1O14810 134 aa20.88■□□□□ 0.93
CACNB1-205ENST00000536613 ATG7O95352 703 aa20.88■□□□□ 0.93
CACNB1-205ENST00000536613 INSRRP14616 1297 aa20.88■□□□□ 0.93
CACNB1-205ENST00000536613 STAT5BP51692 787 aa20.88■□□□□ 0.93
CACNB1-205ENST00000536613 SETQ01105 290 aaPredicted RBP20.88■□□□□ 0.93
CACNB1-205ENST00000536613 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.88■□□□□ 0.93
CACNB1-205ENST00000536613 TNPO1Q92973 898 aaKnown RBP20.88■□□□□ 0.93
CACNB1-205ENST00000536613 TRPC6Q9Y210 931 aa20.88■□□□□ 0.93
CACNB1-205ENST00000536613 IGKV6D-21A0A0A0MT36 114 aa20.87■□□□□ 0.93
CACNB1-205ENST00000536613 LCHNA4D1U4 455 aa20.87■□□□□ 0.93
CACNB1-205ENST00000536613 DDX39AO00148 427 aaKnown RBP20.87■□□□□ 0.93
CACNB1-205ENST00000536613 DHX15O43143 795 aaKnown RBP20.87■□□□□ 0.93
CACNB1-205ENST00000536613 CHRNA1P02708 482 aa20.87■□□□□ 0.93
CACNB1-205ENST00000536613 AMHP03971 560 aa20.87■□□□□ 0.93
CACNB1-205ENST00000536613 IGBP1P78318 339 aa20.87■□□□□ 0.93
CACNB1-205ENST00000536613 SSRP1Q08945 709 aaKnown RBP20.87■□□□□ 0.93
CACNB1-205ENST00000536613 PLCB4Q15147 1175 aa20.87■□□□□ 0.93
CACNB1-205ENST00000536613 RSPH3Q86UC2 560 aa20.87■□□□□ 0.93
CACNB1-205ENST00000536613 RAD9AQ99638 391 aa20.87■□□□□ 0.93
CACNB1-205ENST00000536613 CERS4Q9HA82 394 aa20.87■□□□□ 0.93
CACNB1-205ENST00000536613 CIITAP33076 1130 aa20.86■□□□□ 0.93
CACNB1-205ENST00000536613 SLC26A2P50443 739 aa20.86■□□□□ 0.93
CACNB1-205ENST00000536613 STK3Q13188 491 aa20.86■□□□□ 0.93
CACNB1-205ENST00000536613 CPLX2Q6PUV4 134 aaKnown RBP20.86■□□□□ 0.93
CACNB1-205ENST00000536613 ABHD15Q6UXT9 468 aa20.86■□□□□ 0.93
CACNB1-205ENST00000536613 DNAJB3Q8WWF6 145 aa20.86■□□□□ 0.93
CACNB1-205ENST00000536613 PPM1EQ8WY54 764 aa20.86■□□□□ 0.93
CACNB1-205ENST00000536613 ARNTL2Q8WYA1 636 aa20.86■□□□□ 0.93
CACNB1-205ENST00000536613 ZNF577Q9BSK1 485 aa20.86■□□□□ 0.93
CACNB1-205ENST00000536613 PTPRSQ13332 1948 aa20.85■□□□□ 0.93
CACNB1-205ENST00000536613 EPOPA6NHQ4 379 aa20.85■□□□□ 0.93
CACNB1-205ENST00000536613 DEXIO95424 95 aa20.85■□□□□ 0.93
CACNB1-205ENST00000536613 RPLP2P05387 115 aaKnown RBP20.85■□□□□ 0.93
CACNB1-205ENST00000536613 CENPBP07199 599 aaPredicted RBP20.85■□□□□ 0.93
CACNB1-205ENST00000536613 NLRP5P59047 1200 aa20.85■□□□□ 0.93
CACNB1-205ENST00000536613 ANAPC15P60006 121 aa20.85■□□□□ 0.93
CACNB1-205ENST00000536613 MGAT3Q09327 533 aa20.85■□□□□ 0.93
CACNB1-205ENST00000536613 PRR16Q569H4 304 aa20.85■□□□□ 0.93
CACNB1-205ENST00000536613 FAM117BQ6P1L5 589 aa20.85■□□□□ 0.93
CACNB1-205ENST00000536613 MYOCDQ8IZQ8 938 aa20.85■□□□□ 0.93
CACNB1-205ENST00000536613 APBB2Q92870 758 aa20.85■□□□□ 0.93
CACNB1-205ENST00000536613 ZBTB10Q96DT7 871 aa20.85■□□□□ 0.93
CACNB1-205ENST00000536613 UIMC1Q96RL1 719 aa20.85■□□□□ 0.93
CACNB1-205ENST00000536613 IFIH1Q9BYX4 1025 aaKnown RBP20.85■□□□□ 0.93
CACNB1-205ENST00000536613 TBC1D22BQ9NU19 505 aa20.85■□□□□ 0.93
CACNB1-205ENST00000536613 POTEB3A0JP26 581 aa20.84■□□□□ 0.93
CACNB1-205ENST00000536613 RFXAPO00287 272 aa20.84■□□□□ 0.93
CACNB1-205ENST00000536613 BACH1O14867 736 aa20.84■□□□□ 0.93
CACNB1-205ENST00000536613 CCDC85BQ15834 202 aaPredicted RBP20.84■□□□□ 0.93
CACNB1-205ENST00000536613 FAM160B1Q5W0V3 765 aa20.84■□□□□ 0.93
CACNB1-205ENST00000536613 MIS18BP1Q6P0N0 1132 aa20.84■□□□□ 0.93
CACNB1-205ENST00000536613 POTEBQ6S5H4 581 aa20.84■□□□□ 0.93
CACNB1-205ENST00000536613 SPRED2Q7Z698 418 aa20.84■□□□□ 0.93
CACNB1-205ENST00000536613 CCDC60Q8IWA6 550 aaPredicted RBP20.84■□□□□ 0.93
CACNB1-205ENST00000536613 LENG9Q96B70 501 aa20.84■□□□□ 0.93
CACNB1-205ENST00000536613 PCDHA4Q9UN74 947 aa20.84■□□□□ 0.93
CACNB1-205ENST00000536613 MYO9BQ13459 2157 aa20.84■□□□□ 0.93
CACNB1-205ENST00000536613 VCANP13611 3396 aa20.84■□□□□ 0.93
CACNB1-205ENST00000536613 GHRP10912 638 aa20.83■□□□□ 0.93
CACNB1-205ENST00000536613 POU3F3P20264 500 aaPredicted RBP20.83■□□□□ 0.93
CACNB1-205ENST00000536613 MRPS6P82932 125 aaKnown RBP20.83■□□□□ 0.93
CACNB1-205ENST00000536613 LPIN1Q14693 890 aa20.83■□□□□ 0.93
CACNB1-205ENST00000536613 ZNF746Q6NUN9 644 aaPredicted RBP20.83■□□□□ 0.93
CACNB1-205ENST00000536613 TRAPPC12Q8WVT3 735 aa20.83■□□□□ 0.93
CACNB1-205ENST00000536613 COL25A1Q9BXS0 654 aaPredicted RBP20.83■□□□□ 0.93
CACNB1-205ENST00000536613 FAM49AQ9H0Q0 323 aaPredicted RBP20.83■□□□□ 0.93
CACNB1-205ENST00000536613 ZNF302Q9NR11 478 aa20.83■□□□□ 0.93
CACNB1-205ENST00000536613 INSL6Q9Y581 213 aa20.83■□□□□ 0.93
CACNB1-205ENST00000536613 PCDHA2Q9Y5H9 948 aa20.83■□□□□ 0.93
CACNB1-205ENST00000536613 LINC01553A4QN01 128 aa20.82■□□□□ 0.92
CACNB1-205ENST00000536613 EDIL3O43854 480 aa20.82■□□□□ 0.92
CACNB1-205ENST00000536613 USP11P51784 963 aa20.82■□□□□ 0.92
CACNB1-205ENST00000536613 KRT76Q01546 638 aa20.82■□□□□ 0.92
CACNB1-205ENST00000536613 SCRN1Q12765 414 aa20.82■□□□□ 0.92
CACNB1-205ENST00000536613 PDXDC2PQ6P474 469 aa20.82■□□□□ 0.92
CACNB1-205ENST00000536613 SMAP1Q8IYB5 467 aaPredicted RBP20.82■□□□□ 0.92
CACNB1-205ENST00000536613 FAM177A1Q8N128 213 aaPredicted RBP20.82■□□□□ 0.92
CACNB1-205ENST00000536613 ATP8B4Q8TF62 1192 aa20.82■□□□□ 0.92
CACNB1-205ENST00000536613 PRDM6Q9NQX0 595 aa20.82■□□□□ 0.92
CACNB1-205ENST00000536613 TCEAL9Q9UHQ7 104 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms