RNA–Protein interactions for RNA: ENST00000536344.5

TRIM3-214, Transcript of tripartite motif containing 3, humanhuman

TSL 2 BASIC

Gene TRIM3, Length 2,704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-214ENST00000536344 CCNI2Q6ZMN8 369 aaPredicted RBP23.58■■□□□ 1.37
TRIM3-214ENST00000536344 ARL8AQ96BM9 186 aa23.58■■□□□ 1.37
TRIM3-214ENST00000536344 GGA3Q9NZ52 723 aa23.58■■□□□ 1.37
TRIM3-214ENST00000536344 E9PMD0 336 aa23.58■■□□□ 1.36
TRIM3-214ENST00000536344 H7C1D1 291 aa23.58■■□□□ 1.36
TRIM3-214ENST00000536344 PAK1Q13153 545 aa23.58■■□□□ 1.36
TRIM3-214ENST00000536344 POLR2AP24928 1970 aaKnown RBP23.57■■□□□ 1.36
TRIM3-214ENST00000536344 DDNO94850 711 aaPredicted RBP23.57■■□□□ 1.36
TRIM3-214ENST00000536344 ERCC3P19447 782 aa23.57■■□□□ 1.36
TRIM3-214ENST00000536344 HIRAP54198 1017 aaPredicted RBP23.57■■□□□ 1.36
TRIM3-214ENST00000536344 C2orf54Q08AI8 447 aa23.57■■□□□ 1.36
TRIM3-214ENST00000536344 LDHDQ86WU2 507 aa23.57■■□□□ 1.36
TRIM3-214ENST00000536344 CNGA4Q8IV77 575 aa23.57■■□□□ 1.36
TRIM3-214ENST00000536344 CHURC1Q8WUH1 139 aa23.57■■□□□ 1.36
TRIM3-214ENST00000536344 CABS1Q96KC9 395 aa23.57■■□□□ 1.36
TRIM3-214ENST00000536344 KIAA1024Q9UPX6 916 aa23.57■■□□□ 1.36
TRIM3-214ENST00000536344 CCDC189A1A4V9 331 aa23.57■■□□□ 1.36
TRIM3-214ENST00000536344 ATP1A2P50993 1020 aa23.57■■□□□ 1.36
TRIM3-214ENST00000536344 SH2D3CQ8N5H7 860 aa23.57■■□□□ 1.36
TRIM3-214ENST00000536344 GLIS3Q8NEA6 775 aa23.57■■□□□ 1.36
TRIM3-214ENST00000536344 LARP4BQ92615 738 aaKnown RBP23.57■■□□□ 1.36
TRIM3-214ENST00000536344 WRNIP1Q96S55 665 aa23.57■■□□□ 1.36
TRIM3-214ENST00000536344 NPHP3-ACAD11A0A0J9YXS1 232 aa23.56■■□□□ 1.36
TRIM3-214ENST00000536344 CYP4A11Q02928 519 aa23.56■■□□□ 1.36
TRIM3-214ENST00000536344 SND1Q7KZF4 910 aaKnown RBP eCLIP23.56■■□□□ 1.36
TRIM3-214ENST00000536344 PKD2L1Q9P0L9 805 aa23.56■■□□□ 1.36
TRIM3-214ENST00000536344 SAR1BQ9Y6B6 198 aa23.56■■□□□ 1.36
TRIM3-214ENST00000536344 NDUFAB1O14561 156 aa23.56■■□□□ 1.36
TRIM3-214ENST00000536344 SV2BQ7L1I2 683 aa23.56■■□□□ 1.36
TRIM3-214ENST00000536344 TMTC1Q8IUR5 882 aa23.56■■□□□ 1.36
TRIM3-214ENST00000536344 WNK4Q96J92 1243 aa23.56■■□□□ 1.36
TRIM3-214ENST00000536344 RAB34Q9BZG1 259 aa23.56■■□□□ 1.36
TRIM3-214ENST00000536344 RAVER2Q9HCJ3 691 aaKnown RBP23.56■■□□□ 1.36
TRIM3-214ENST00000536344 TBC1D7Q9P0N9 293 aa23.56■■□□□ 1.36
TRIM3-214ENST00000536344 POTEFA5A3E0 1075 aa23.55■■□□□ 1.36
TRIM3-214ENST00000536344 POTEIP0CG38 1075 aa23.55■■□□□ 1.36
TRIM3-214ENST00000536344 USP8P40818 1118 aa23.55■■□□□ 1.36
TRIM3-214ENST00000536344 KCTD16Q68DU8 428 aa23.55■■□□□ 1.36
TRIM3-214ENST00000536344 POTEGQ6S5H5 508 aa23.55■■□□□ 1.36
TRIM3-214ENST00000536344 POTEEQ6S8J3 1075 aa23.55■■□□□ 1.36
TRIM3-214ENST00000536344 EXOC1Q9NV70 894 aa23.55■■□□□ 1.36
TRIM3-214ENST00000536344 RMND1Q9NWS8 449 aa23.55■■□□□ 1.36
TRIM3-214ENST00000536344 CHMP2AO43633 222 aa23.55■■□□□ 1.36
TRIM3-214ENST00000536344 FLOT1O75955 427 aa23.55■■□□□ 1.36
TRIM3-214ENST00000536344 KRT9P35527 623 aa23.55■■□□□ 1.36
TRIM3-214ENST00000536344 LRRC41Q15345 812 aa23.55■■□□□ 1.36
TRIM3-214ENST00000536344 LENG9Q96B70 501 aa23.55■■□□□ 1.36
TRIM3-214ENST00000536344 TAB2Q9NYJ8 693 aa23.55■■□□□ 1.36
TRIM3-214ENST00000536344 CCPG1Q9ULG6 757 aa23.55■■□□□ 1.36
TRIM3-214ENST00000536344 PES1O00541 588 aaKnown RBP23.54■■□□□ 1.36
TRIM3-214ENST00000536344 NFIBO00712 420 aa23.54■■□□□ 1.36
TRIM3-214ENST00000536344 MAP3K10Q02779 954 aa23.54■■□□□ 1.36
TRIM3-214ENST00000536344 CDKAL1Q5VV42 579 aa23.54■■□□□ 1.36
TRIM3-214ENST00000536344 HOOK2Q96ED9 719 aa23.54■■□□□ 1.36
TRIM3-214ENST00000536344 RANBP17Q9H2T7 1088 aaKnown RBP23.54■■□□□ 1.36
TRIM3-214ENST00000536344 ZEB2O60315 1214 aa23.54■■□□□ 1.36
TRIM3-214ENST00000536344 USP11P51784 963 aa23.54■■□□□ 1.36
TRIM3-214ENST00000536344 ACTN3Q08043 901 aaPredicted RBP23.54■■□□□ 1.36
TRIM3-214ENST00000536344 AP3B2Q13367 1082 aa23.54■■□□□ 1.36
TRIM3-214ENST00000536344 TTMPQ5BVD1 217 aa23.54■■□□□ 1.36
TRIM3-214ENST00000536344 CRYGNQ8WXF5 182 aa23.54■■□□□ 1.36
TRIM3-214ENST00000536344 SH3GL2Q99962 352 aa23.54■■□□□ 1.36
TRIM3-214ENST00000536344 SH2D4AQ9H788 454 aa23.54■■□□□ 1.36
TRIM3-214ENST00000536344 KCNMB3Q9NPA1 279 aa23.54■■□□□ 1.36
TRIM3-214ENST00000536344 ATAD5Q96QE3 1844 aa23.54■■□□□ 1.36
TRIM3-214ENST00000536344 KIF1CO43896 1103 aaKnown RBP23.53■■□□□ 1.36
TRIM3-214ENST00000536344 MED24O75448 989 aa23.53■■□□□ 1.36
TRIM3-214ENST00000536344 ALAS1P13196 640 aa23.53■■□□□ 1.36
TRIM3-214ENST00000536344 PDIA5Q14554 519 aa23.53■■□□□ 1.36
TRIM3-214ENST00000536344 CYP26C1Q6V0L0 522 aa23.53■■□□□ 1.36
TRIM3-214ENST00000536344 ADSSL1Q8N142 457 aa23.53■■□□□ 1.36
TRIM3-214ENST00000536344 OTUD6BQ8N6M0 293 aa23.53■■□□□ 1.36
TRIM3-214ENST00000536344 PURBQ96QR8 312 aaKnown RBP23.53■■□□□ 1.36
TRIM3-214ENST00000536344 EPN1Q9Y6I3 576 aaPredicted RBP23.53■■□□□ 1.36
TRIM3-214ENST00000536344 N4BP3O15049 544 aa23.53■■□□□ 1.36
TRIM3-214ENST00000536344 NKRFO15226 690 aaKnown RBP eCLIP23.53■■□□□ 1.36
TRIM3-214ENST00000536344 MSH4O15457 936 aa23.53■■□□□ 1.36
TRIM3-214ENST00000536344 GCFC2P16383 781 aaKnown RBP23.53■■□□□ 1.36
TRIM3-214ENST00000536344 PSMC6P62333 389 aa23.53■■□□□ 1.36
TRIM3-214ENST00000536344 RAD54LQ92698 747 aa23.53■■□□□ 1.36
TRIM3-214ENST00000536344 GPRC5DQ9NZD1 345 aa23.53■■□□□ 1.36
TRIM3-214ENST00000536344 DMGDHQ9UI17 866 aaKnown RBP23.53■■□□□ 1.36
TRIM3-214ENST00000536344 DUSP10Q9Y6W6 482 aa23.53■■□□□ 1.36
TRIM3-214ENST00000536344 NDUFA10O95299 355 aa23.53■■□□□ 1.36
TRIM3-214ENST00000536344 FECHP22830 423 aa23.53■■□□□ 1.36
TRIM3-214ENST00000536344 SREBF1P36956 1147 aa23.53■■□□□ 1.36
TRIM3-214ENST00000536344 SLC7A5Q01650 507 aa23.53■■□□□ 1.36
TRIM3-214ENST00000536344 KRT31Q15323 416 aa23.53■■□□□ 1.36
TRIM3-214ENST00000536344 TSEN2Q8NCE0 465 aaKnown RBP23.53■■□□□ 1.36
TRIM3-214ENST00000536344 GIMAP7Q8NHV1 300 aa23.53■■□□□ 1.36
TRIM3-214ENST00000536344 ETNPPLQ8TBG4 499 aa23.53■■□□□ 1.36
TRIM3-214ENST00000536344 DDX12PQ92771 950 aa23.53■■□□□ 1.36
TRIM3-214ENST00000536344 JAKMIP2Q96AA8 810 aa23.53■■□□□ 1.36
TRIM3-214ENST00000536344 GLT8D2Q9H1C3 349 aa23.53■■□□□ 1.36
TRIM3-214ENST00000536344 EMILIN3Q9NT22 766 aa23.53■■□□□ 1.36
TRIM3-214ENST00000536344 MYO1AQ9UBC5 1043 aa23.53■■□□□ 1.36
TRIM3-214ENST00000536344 LTBP3Q9NS15 1303 aa23.52■■□□□ 1.36
TRIM3-214ENST00000536344 GCOM1H8Y6P7 765 aaPredicted RBP23.52■■□□□ 1.36
TRIM3-214ENST00000536344 RHOBTB3O94955 611 aa23.52■■□□□ 1.36
TRIM3-214ENST00000536344 POLR2MP0CAP2 368 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms