RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 CARD9Q9H257 536 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 SENP2Q9HC62 589 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 PACSIN2Q9UNF0 486 aaPredicted RBP4.07□□□□□ -1.76
MCF2-210ENST00000536274 ITM2BQ9Y287 266 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 RBMX2Q9Y388 322 aaKnown RBP4.07□□□□□ -1.76
MCF2-210ENST00000536274 CAPN6Q9Y6Q1 641 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 ANKRD31Q8N7Z5 1873 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.07□□□□□ -1.76
MCF2-210ENST00000536274 TARSL2A2RTX5 802 aaKnown RBP4.07□□□□□ -1.76
MCF2-210ENST00000536274 PALM3A6NDB9 673 aaPredicted RBP4.07□□□□□ -1.76
MCF2-210ENST00000536274 GOLGA6L10A6NI86 522 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 CTNND1O60716 968 aaKnown RBP4.07□□□□□ -1.76
MCF2-210ENST00000536274 MOCS3O95396 460 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 PLEKP08567 350 aaPredicted RBP4.07□□□□□ -1.76
MCF2-210ENST00000536274 KCNC4Q03721 635 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 NEXNQ0ZGT2 675 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 TEFQ10587 303 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 PAK2Q13177 524 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 RCN2Q14257 317 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 LRRC14Q15048 493 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 CCDC57Q2TAC2 916 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 CNPY1Q3B7I2 92 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 LACTB2Q53H82 288 aaPredicted RBP4.07□□□□□ -1.76
MCF2-210ENST00000536274 APTXQ7Z2E3 356 aaKnown RBP4.07□□□□□ -1.76
MCF2-210ENST00000536274 TMC4Q7Z404 712 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 CREG2Q8IUH2 290 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 SLC7A5P1Q8MH63 180 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 NLGN1Q8N2Q7 840 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 CCDC155Q8N6L0 562 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 MGARPQ8TDB4 240 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 ZFAND2BQ8WV99 257 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 NELFBQ8WX92 580 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 MAP4K1Q92918 833 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 KLHL29Q96CT2 875 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 NMD3Q96D46 503 aaKnown RBP4.07□□□□□ -1.76
MCF2-210ENST00000536274 DYDC2Q96IM9 177 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 CLMNQ96JQ2 1002 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 XPO6Q96QU8 1125 aaKnown RBP4.07□□□□□ -1.76
MCF2-210ENST00000536274 SELENOSQ9BQE4 189 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 PFDN4Q9NQP4 134 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 CCDC87Q9NVE4 849 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 ATXN10Q9UBB4 475 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 TSKSQ9UJT2 592 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 INTUQ9ULD6 942 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 ZBTB21Q9ULJ3 1066 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 HEMK1Q9Y5R4 338 aaPredicted RBP4.07□□□□□ -1.76
MCF2-210ENST00000536274 IVNS1ABPQ9Y6Y0 642 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 ZMYM6O95789 1325 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 IGSF1Q8N6C5 1336 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 COL15A1P39059 1388 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 SFI1A8K8P3 1242 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 ENTPD5O75356 428 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 TACC1O75410 805 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 HEXIM1O94992 359 aaKnown RBP4.07□□□□□ -1.76
MCF2-210ENST00000536274 OR6B1O95007 311 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 NDUFA10O95299 355 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 NPTXRO95502 500 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 ANXA1P04083 346 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 VIMP08670 466 aaKnown RBP4.07□□□□□ -1.76
MCF2-210ENST00000536274 VIL1P09327 827 aaKnown RBP4.07□□□□□ -1.76
MCF2-210ENST00000536274 EPB41P11171 864 aaKnown RBP4.07□□□□□ -1.76
MCF2-210ENST00000536274 ZNF18P17022 549 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 HOXD12P35452 270 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 MSH2P43246 934 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 RHBDL3P58872 404 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 DMPKQ09013 629 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 KCNA1Q09470 495 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 DPYDQ12882 1025 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 DRP2Q13474 957 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 HLTFQ14527 1009 aaKnown RBP eCLIP4.07□□□□□ -1.76
MCF2-210ENST00000536274 RRS1Q15050 365 aaKnown RBP4.07□□□□□ -1.76
MCF2-210ENST00000536274 MAP7D1Q3KQU3 841 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 FAM182BQ5T319 152 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 SYNE3Q6ZMZ3 975 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 COL23A1Q86Y22 540 aaPredicted RBP4.07□□□□□ -1.76
MCF2-210ENST00000536274 KLHL7Q8IXQ5 586 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 KLHDC4Q8TBB5 520 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 COG3Q96JB2 828 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 NR1H4Q96RI1 486 aaPredicted RBP4.07□□□□□ -1.76
MCF2-210ENST00000536274 NEUROG2Q9H2A3 272 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 INCENPQ9NQS7 918 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 ABHD10Q9NUJ1 306 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 RABL2AQ9UBK7 228 aaPredicted RBP4.07□□□□□ -1.76
MCF2-210ENST00000536274 SERTAD1Q9UHV2 236 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 SLC12A6Q9UHW9 1150 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 PNMA2Q9UL42 364 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 BARX2Q9UMQ3 279 aaPredicted RBP4.07□□□□□ -1.76
MCF2-210ENST00000536274 TTF2Q9UNY4 1162 aaKnown RBP4.07□□□□□ -1.76
MCF2-210ENST00000536274 N6AMT1Q9Y5N5 214 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 EPN1Q9Y6I3 576 aaPredicted RBP4.07□□□□□ -1.76
MCF2-210ENST00000536274 KCPQ6ZWJ8 1503 aa4.06□□□□□ -1.76
MCF2-210ENST00000536274 TRPM7Q96QT4 1865 aa4.06□□□□□ -1.76
MCF2-210ENST00000536274 COL11A2P13942 1736 aaPredicted RBP4.06□□□□□ -1.76
MCF2-210ENST00000536274 MYH10P35580 1976 aa4.06□□□□□ -1.76
MCF2-210ENST00000536274 TLDC2A0PJX2 215 aa4.06□□□□□ -1.76
MCF2-210ENST00000536274 CETN3O15182 167 aa4.06□□□□□ -1.76
MCF2-210ENST00000536274 BUB1O43683 1085 aa4.06□□□□□ -1.76
MCF2-210ENST00000536274 PSMC4P43686 418 aa4.06□□□□□ -1.76
MCF2-210ENST00000536274 RXRGP48443 463 aa4.06□□□□□ -1.76
MCF2-210ENST00000536274 CACNA2D1P54289 1103 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms