RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 TUFT1Q9NNX1 390 aa12.91□□□□□ -0.34
CDCA3-206ENST00000536241 DDX19AQ9NUU7 478 aaKnown RBP12.91□□□□□ -0.34
CDCA3-206ENST00000536241 WRAP73Q9P2S5 460 aaPredicted RBP12.91□□□□□ -0.34
CDCA3-206ENST00000536241 GABBR1Q9UBS5 961 aa12.91□□□□□ -0.34
CDCA3-206ENST00000536241 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.91□□□□□ -0.34
CDCA3-206ENST00000536241 NOP56O00567 594 aaKnown RBP12.91□□□□□ -0.34
CDCA3-206ENST00000536241 SUPT20HL2P0C7V6 817 aa12.91□□□□□ -0.34
CDCA3-206ENST00000536241 AKR1A1P14550 325 aa12.91□□□□□ -0.34
CDCA3-206ENST00000536241 TCF7P36402 384 aaPredicted RBP12.91□□□□□ -0.34
CDCA3-206ENST00000536241 PSMC6P62333 389 aa12.91□□□□□ -0.34
CDCA3-206ENST00000536241 CAMK4Q16566 473 aa12.91□□□□□ -0.34
CDCA3-206ENST00000536241 KLHL40Q2TBA0 621 aa12.91□□□□□ -0.34
CDCA3-206ENST00000536241 NAALADL2Q58DX5 795 aa12.91□□□□□ -0.34
CDCA3-206ENST00000536241 KRBA2Q6ZNG9 492 aa12.91□□□□□ -0.34
CDCA3-206ENST00000536241 KCNK18Q7Z418 384 aa12.91□□□□□ -0.34
CDCA3-206ENST00000536241 SLAIN1Q8ND83 568 aa12.91□□□□□ -0.34
CDCA3-206ENST00000536241 OR6J1Q8NGC5 347 aa12.91□□□□□ -0.34
CDCA3-206ENST00000536241 AFG1LQ8WV93 481 aa12.91□□□□□ -0.34
CDCA3-206ENST00000536241 PCYT2Q99447 389 aa12.91□□□□□ -0.34
CDCA3-206ENST00000536241 NT5C3AQ9H0P0 336 aa12.91□□□□□ -0.34
CDCA3-206ENST00000536241 IGKV6D-21A0A0A0MT36 114 aa12.9□□□□□ -0.34
CDCA3-206ENST00000536241 E9PMD0 336 aa12.9□□□□□ -0.34
CDCA3-206ENST00000536241 BACH1O14867 736 aa12.9□□□□□ -0.34
CDCA3-206ENST00000536241 SEPT4O43236 478 aa12.9□□□□□ -0.34
CDCA3-206ENST00000536241 SLC26A4O43511 780 aa12.9□□□□□ -0.34
CDCA3-206ENST00000536241 KINO60870 393 aaKnown RBP12.9□□□□□ -0.34
CDCA3-206ENST00000536241 INHAP05111 366 aa12.9□□□□□ -0.34
CDCA3-206ENST00000536241 STAT6P42226 847 aa12.9□□□□□ -0.34
CDCA3-206ENST00000536241 QARSP47897 775 aaKnown RBP12.9□□□□□ -0.34
CDCA3-206ENST00000536241 PSMC5P62195 406 aa12.9□□□□□ -0.34
CDCA3-206ENST00000536241 IRX5P78411 483 aaPredicted RBP12.9□□□□□ -0.34
CDCA3-206ENST00000536241 UGCGQ16739 394 aa12.9□□□□□ -0.34
CDCA3-206ENST00000536241 TMEM119Q4V9L6 283 aa12.9□□□□□ -0.34
CDCA3-206ENST00000536241 UTP14CQ5TAP6 766 aaKnown RBP12.9□□□□□ -0.34
CDCA3-206ENST00000536241 MAP3K21Q5TCX8 1036 aa12.9□□□□□ -0.34
CDCA3-206ENST00000536241 POTEGQ6S5H5 508 aa12.9□□□□□ -0.34
CDCA3-206ENST00000536241 CCDC60Q8IWA6 550 aaPredicted RBP12.9□□□□□ -0.34
CDCA3-206ENST00000536241 CNNM3Q8NE01 707 aa12.9□□□□□ -0.34
CDCA3-206ENST00000536241 PIGOQ8TEQ8 1089 aa12.9□□□□□ -0.34
CDCA3-206ENST00000536241 SH3TC2Q8TF17 1288 aa12.9□□□□□ -0.34
CDCA3-206ENST00000536241 STAMQ92783 540 aa12.9□□□□□ -0.34
CDCA3-206ENST00000536241 EMID1Q96A84 441 aaPredicted RBP12.9□□□□□ -0.34
CDCA3-206ENST00000536241 LXNQ9BS40 222 aa12.9□□□□□ -0.34
CDCA3-206ENST00000536241 ZSWIM4Q9H7M6 989 aa12.9□□□□□ -0.34
CDCA3-206ENST00000536241 Q9Y3F1 56 aa12.9□□□□□ -0.34
CDCA3-206ENST00000536241 KDM3AQ9Y4C1 1321 aa12.89□□□□□ -0.35
CDCA3-206ENST00000536241 ACTN4O43707 911 aaKnown RBP12.89□□□□□ -0.35
CDCA3-206ENST00000536241 DUSP11O75319 330 aaKnown RBP12.89□□□□□ -0.35
CDCA3-206ENST00000536241 PPFIA4O75335 1185 aa12.89□□□□□ -0.35
CDCA3-206ENST00000536241 SLFN14P0C7P3 912 aa12.89□□□□□ -0.35
CDCA3-206ENST00000536241 STAT5BP51692 787 aa12.89□□□□□ -0.35
CDCA3-206ENST00000536241 DHX8Q14562 1220 aaKnown RBP12.89□□□□□ -0.35
CDCA3-206ENST00000536241 CAVIN1Q6NZI2 390 aaKnown RBP12.89□□□□□ -0.35
CDCA3-206ENST00000536241 TLK2Q86UE8 772 aa12.89□□□□□ -0.35
CDCA3-206ENST00000536241 CEP57L1Q8IYX8 460 aa12.89□□□□□ -0.35
CDCA3-206ENST00000536241 PPTC7Q8NI37 304 aa12.89□□□□□ -0.35
CDCA3-206ENST00000536241 NEK9Q8TD19 979 aa12.89□□□□□ -0.35
CDCA3-206ENST00000536241 TIGD1Q96MW7 591 aa12.89□□□□□ -0.35
CDCA3-206ENST00000536241 NACC1Q96RE7 527 aa12.89□□□□□ -0.35
CDCA3-206ENST00000536241 PYM1Q9BRP8 204 aaKnown RBP12.89□□□□□ -0.35
CDCA3-206ENST00000536241 AP5M1Q9H0R1 490 aa12.89□□□□□ -0.35
CDCA3-206ENST00000536241 ZNF302Q9NR11 478 aa12.89□□□□□ -0.35
CDCA3-206ENST00000536241 BLOC1S4Q9NUP1 217 aa12.89□□□□□ -0.35
CDCA3-206ENST00000536241 TMEM63CQ9P1W3 806 aa12.89□□□□□ -0.35
CDCA3-206ENST00000536241 USP25Q9UHP3 1055 aa12.89□□□□□ -0.35
CDCA3-206ENST00000536241 DNM3Q9UQ16 869 aa12.89□□□□□ -0.35
CDCA3-206ENST00000536241 MAFBQ9Y5Q3 323 aaPredicted RBP12.89□□□□□ -0.35
CDCA3-206ENST00000536241 ZNF862O60290 1169 aa12.88□□□□□ -0.35
CDCA3-206ENST00000536241 ATP4AP20648 1035 aa12.88□□□□□ -0.35
CDCA3-206ENST00000536241 MUTP22033 750 aa12.88□□□□□ -0.35
CDCA3-206ENST00000536241 AFMP43652 599 aa12.88□□□□□ -0.35
CDCA3-206ENST00000536241 BEX3Q00994 111 aa12.88□□□□□ -0.35
CDCA3-206ENST00000536241 MCM6Q14566 821 aa12.88□□□□□ -0.35
CDCA3-206ENST00000536241 PDXDC2PQ6P474 469 aa12.88□□□□□ -0.35
CDCA3-206ENST00000536241 CTU1Q7Z7A3 348 aaKnown RBP12.88□□□□□ -0.35
CDCA3-206ENST00000536241 C4orf19Q8IY42 314 aa12.88□□□□□ -0.35
CDCA3-206ENST00000536241 GRAMD1CQ8IYS0 662 aa12.88□□□□□ -0.35
CDCA3-206ENST00000536241 RAD54LQ92698 747 aa12.88□□□□□ -0.35
CDCA3-206ENST00000536241 GLG1Q92896 1179 aa12.88□□□□□ -0.35
CDCA3-206ENST00000536241 PAGE5Q96GU1 130 aa12.88□□□□□ -0.35
CDCA3-206ENST00000536241 HMX1Q9NP08 348 aaPredicted RBP12.88□□□□□ -0.35
CDCA3-206ENST00000536241 CEP350Q5VT06 3117 aa12.87□□□□□ -0.35
CDCA3-206ENST00000536241 A6NJR5 290 aa12.87□□□□□ -0.35
CDCA3-206ENST00000536241 LGR5O75473 907 aa12.87□□□□□ -0.35
CDCA3-206ENST00000536241 STBD1O95210 358 aa12.87□□□□□ -0.35
CDCA3-206ENST00000536241 LYPLA2O95372 231 aa12.87□□□□□ -0.35
CDCA3-206ENST00000536241 PGK1P00558 417 aa12.87□□□□□ -0.35
CDCA3-206ENST00000536241 MMP3P08254 477 aa12.87□□□□□ -0.35
CDCA3-206ENST00000536241 RARBP10826 455 aa12.87□□□□□ -0.35
CDCA3-206ENST00000536241 MDM2Q00987 491 aaPredicted RBP12.87□□□□□ -0.35
CDCA3-206ENST00000536241 FAM160B1Q5W0V3 765 aa12.87□□□□□ -0.35
CDCA3-206ENST00000536241 SV2BQ7L1I2 683 aa12.87□□□□□ -0.35
CDCA3-206ENST00000536241 CKAP2LQ8IYA6 745 aa12.87□□□□□ -0.35
CDCA3-206ENST00000536241 KCTD17Q8N5Z5 321 aa12.87□□□□□ -0.35
CDCA3-206ENST00000536241 LARP4BQ92615 738 aaKnown RBP12.87□□□□□ -0.35
CDCA3-206ENST00000536241 ERCC4Q92889 916 aaPredicted RBP12.87□□□□□ -0.35
CDCA3-206ENST00000536241 ATP6V0A1Q93050 837 aa12.87□□□□□ -0.35
CDCA3-206ENST00000536241 MTRQ99707 1265 aa12.87□□□□□ -0.35
CDCA3-206ENST00000536241 SH2D3AQ9BRG2 576 aa12.87□□□□□ -0.35
CDCA3-206ENST00000536241 NUP62CLQ9H1M0 184 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms