RNA–Protein interactions for RNA: ENST00000536212.1

VPS33A-203, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-203ENST00000536212 KIAA1551Q9HCM1 1747 aa6.39□□□□□ -1.39
VPS33A-203ENST00000536212 A0A1W2PQJ5 194 aa6.39□□□□□ -1.39
VPS33A-203ENST00000536212 TTC26A0AVF1 554 aa6.39□□□□□ -1.39
VPS33A-203ENST00000536212 TSPY2A6NKD2 308 aa6.39□□□□□ -1.39
VPS33A-203ENST00000536212 STXBP3O00186 592 aa6.39□□□□□ -1.39
VPS33A-203ENST00000536212 NMT2O60551 498 aa6.39□□□□□ -1.39
VPS33A-203ENST00000536212 EIF3JO75822 258 aaKnown RBP6.39□□□□□ -1.39
VPS33A-203ENST00000536212 FAM13AO94988 1023 aa6.39□□□□□ -1.39
VPS33A-203ENST00000536212 CCNE1P24864 410 aa6.39□□□□□ -1.39
VPS33A-203ENST00000536212 SMARCA1P28370 1054 aa6.39□□□□□ -1.39
VPS33A-203ENST00000536212 HIBADHP31937 336 aaKnown RBP6.39□□□□□ -1.39
VPS33A-203ENST00000536212 HNRNPH3P31942 346 aaKnown RBP6.39□□□□□ -1.39
VPS33A-203ENST00000536212 PMS1P54277 932 aaKnown RBP6.39□□□□□ -1.39
VPS33A-203ENST00000536212 USP14P54578 494 aa6.39□□□□□ -1.39
VPS33A-203ENST00000536212 RPS8P62241 208 aaKnown RBP6.39□□□□□ -1.39
VPS33A-203ENST00000536212 HERVK_113P62684 666 aa6.39□□□□□ -1.39
VPS33A-203ENST00000536212 KRT83P78385 493 aa6.39□□□□□ -1.39
VPS33A-203ENST00000536212 ST5P78524 1137 aa6.39□□□□□ -1.39
VPS33A-203ENST00000536212 RELBQ01201 579 aa6.39□□□□□ -1.39
VPS33A-203ENST00000536212 CENPCQ03188 943 aa6.39□□□□□ -1.39
VPS33A-203ENST00000536212 UBXN1Q04323 297 aa6.39□□□□□ -1.39
VPS33A-203ENST00000536212 ORC2Q13416 577 aaPredicted RBP6.39□□□□□ -1.39
VPS33A-203ENST00000536212 STIM1Q13586 685 aa6.39□□□□□ -1.39
VPS33A-203ENST00000536212 DDB1Q16531 1140 aa6.39□□□□□ -1.39
VPS33A-203ENST00000536212 FAM47AQ5JRC9 791 aa6.39□□□□□ -1.39
VPS33A-203ENST00000536212 SPTY2D1Q68D10 685 aaPredicted RBP6.39□□□□□ -1.39
VPS33A-203ENST00000536212 WDR59Q6PJI9 974 aa6.39□□□□□ -1.39
VPS33A-203ENST00000536212 DTHD1Q6ZMT9 781 aa6.39□□□□□ -1.39
VPS33A-203ENST00000536212 C15orf52Q6ZUT6 534 aaKnown RBP6.39□□□□□ -1.39
VPS33A-203ENST00000536212 ZSCAN29Q8IWY8 852 aaPredicted RBP6.39□□□□□ -1.39
VPS33A-203ENST00000536212 CCDC170Q8IYT3 715 aa6.39□□□□□ -1.39
VPS33A-203ENST00000536212 CNPY4Q8N129 248 aa6.39□□□□□ -1.39
VPS33A-203ENST00000536212 CEP120Q8N960 986 aa6.39□□□□□ -1.39
VPS33A-203ENST00000536212 CCDC148Q8NFR7 591 aa6.39□□□□□ -1.39
VPS33A-203ENST00000536212 IQCDQ96DY2 449 aa6.39□□□□□ -1.39
VPS33A-203ENST00000536212 RPGRIP1Q96KN7 1286 aa6.39□□□□□ -1.39
VPS33A-203ENST00000536212 ERGIC2Q96RQ1 377 aa6.39□□□□□ -1.39
VPS33A-203ENST00000536212 NUP88Q99567 741 aaPredicted RBP6.39□□□□□ -1.39
VPS33A-203ENST00000536212 DUSP9Q99956 384 aaKnown RBP6.39□□□□□ -1.39
VPS33A-203ENST00000536212 C7orf25Q9BPX7 421 aa6.39□□□□□ -1.39
VPS33A-203ENST00000536212 SLF1Q9BQI6 1058 aa6.39□□□□□ -1.39
VPS33A-203ENST00000536212 TMEM60Q9H2L4 133 aa6.39□□□□□ -1.39
VPS33A-203ENST00000536212 KAT14Q9H8E8 782 aa6.39□□□□□ -1.39
VPS33A-203ENST00000536212 VIPAS39Q9H9C1 493 aa6.39□□□□□ -1.39
VPS33A-203ENST00000536212 ZCCHC17Q9NP64 241 aaKnown RBP6.39□□□□□ -1.39
VPS33A-203ENST00000536212 POLMQ9NP87 494 aaPredicted RBP6.39□□□□□ -1.39
VPS33A-203ENST00000536212 MAD2L2Q9UI95 211 aa6.39□□□□□ -1.39
VPS33A-203ENST00000536212 PCDHA6Q9UN73 950 aa6.39□□□□□ -1.39
VPS33A-203ENST00000536212 PCDHA8Q9Y5H6 950 aa6.39□□□□□ -1.39
VPS33A-203ENST00000536212 USP3Q9Y6I4 520 aa6.39□□□□□ -1.39
VPS33A-203ENST00000536212 FLT1P17948 1338 aa6.39□□□□□ -1.39
VPS33A-203ENST00000536212 MAST2Q6P0Q8 1798 aa6.39□□□□□ -1.39
VPS33A-203ENST00000536212 CCDC194A0A1B0GVG4 234 aa6.38□□□□□ -1.39
VPS33A-203ENST00000536212 ANO9A1A5B4 782 aa6.38□□□□□ -1.39
VPS33A-203ENST00000536212 BICDL2A1A5D9 508 aa6.38□□□□□ -1.39
VPS33A-203ENST00000536212 TARSL2A2RTX5 802 aaKnown RBP6.38□□□□□ -1.39
VPS33A-203ENST00000536212 TRIM49BA6NDI0 452 aa6.38□□□□□ -1.39
VPS33A-203ENST00000536212 ERICH4A6NGS2 130 aa6.38□□□□□ -1.39
VPS33A-203ENST00000536212 EIF3CLB5ME19 914 aaKnown RBP6.38□□□□□ -1.39
VPS33A-203ENST00000536212 PSMA7O14818 248 aa6.38□□□□□ -1.39
VPS33A-203ENST00000536212 CYTH3O43739 400 aa6.38□□□□□ -1.39
VPS33A-203ENST00000536212 COBLO75128 1261 aa6.38□□□□□ -1.39
VPS33A-203ENST00000536212 MCM3P25205 808 aa6.38□□□□□ -1.39
VPS33A-203ENST00000536212 KLRK1P26718 216 aa6.38□□□□□ -1.39
VPS33A-203ENST00000536212 MAPK1P28482 360 aa6.38□□□□□ -1.39
VPS33A-203ENST00000536212 PRDX5P30044 214 aa6.38□□□□□ -1.39
VPS33A-203ENST00000536212 TM4SF1P30408 202 aa6.38□□□□□ -1.39
VPS33A-203ENST00000536212 CYLC1P35663 651 aaPredicted RBP6.38□□□□□ -1.39
VPS33A-203ENST00000536212 NOVP48745 357 aa6.38□□□□□ -1.39
VPS33A-203ENST00000536212 MMP14P50281 582 aa6.38□□□□□ -1.39
VPS33A-203ENST00000536212 VSNL1P62760 191 aa6.38□□□□□ -1.39
VPS33A-203ENST00000536212 ZBED6P86452 979 aa6.38□□□□□ -1.39
VPS33A-203ENST00000536212 TFAP4Q01664 338 aa6.38□□□□□ -1.39
VPS33A-203ENST00000536212 CKAP4Q07065 602 aaKnown RBP6.38□□□□□ -1.39
VPS33A-203ENST00000536212 CASP8Q14790 479 aa6.38□□□□□ -1.39
VPS33A-203ENST00000536212 TEAD4Q15561 434 aa6.38□□□□□ -1.39
VPS33A-203ENST00000536212 FOXR2Q6PJQ5 311 aa6.38□□□□□ -1.39
VPS33A-203ENST00000536212 ZNF572Q7Z3I7 529 aaPredicted RBP6.38□□□□□ -1.39
VPS33A-203ENST00000536212 ALYREFQ86V81 257 aaKnown RBP6.38□□□□□ -1.39
VPS33A-203ENST00000536212 FAM114A1Q8IWE2 563 aa6.38□□□□□ -1.39
VPS33A-203ENST00000536212 NOA1Q8NC60 698 aaKnown RBP6.38□□□□□ -1.39
VPS33A-203ENST00000536212 LINC00116Q8NCU8 138 aa6.38□□□□□ -1.39
VPS33A-203ENST00000536212 GOLGA5Q8TBA6 731 aa6.38□□□□□ -1.39
VPS33A-203ENST00000536212 FAM71BQ8TC56 605 aa6.38□□□□□ -1.39
VPS33A-203ENST00000536212 LRRC15Q8TF66 581 aa6.38□□□□□ -1.39
VPS33A-203ENST00000536212 P2RX5Q93086 422 aa6.38□□□□□ -1.39
VPS33A-203ENST00000536212 EIF3CQ99613 913 aaKnown RBP6.38□□□□□ -1.39
VPS33A-203ENST00000536212 SPZ1Q9BXG8 430 aa6.38□□□□□ -1.39
VPS33A-203ENST00000536212 FHDC1Q9C0D6 1143 aaPredicted RBP6.38□□□□□ -1.39
VPS33A-203ENST00000536212 NYXQ9GZU5 481 aa6.38□□□□□ -1.39
VPS33A-203ENST00000536212 ZMYND12Q9H0C1 365 aa6.38□□□□□ -1.39
VPS33A-203ENST00000536212 ZSWIM4Q9H7M6 989 aa6.38□□□□□ -1.39
VPS33A-203ENST00000536212 EXOC1Q9NV70 894 aa6.38□□□□□ -1.39
VPS33A-203ENST00000536212 BARHL2Q9NY43 387 aa6.38□□□□□ -1.39
VPS33A-203ENST00000536212 MAGEC2Q9UBF1 373 aaPredicted RBP6.38□□□□□ -1.39
VPS33A-203ENST00000536212 DCTN4Q9UJW0 460 aa6.38□□□□□ -1.39
VPS33A-203ENST00000536212 ADAM21Q9UKJ8 722 aa6.38□□□□□ -1.39
VPS33A-203ENST00000536212 LUC7L2Q9Y383 392 aaKnown RBP6.38□□□□□ -1.39
VPS33A-203ENST00000536212 LAMB1P07942 1786 aa6.38□□□□□ -1.39
VPS33A-203ENST00000536212 COL5A3P25940 1745 aaPredicted RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms