RNA–Protein interactions for RNA: ENST00000536008.1

CIT-206, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-206ENST00000536008 LRCH3Q96II8 777 aa18.42■□□□□ 0.54
CIT-206ENST00000536008 RIT2Q99578 217 aa18.42■□□□□ 0.54
CIT-206ENST00000536008 NAP1L4Q99733 375 aaKnown RBP18.42■□□□□ 0.54
CIT-206ENST00000536008 MTIF3Q9H2K0 278 aaKnown RBP18.42■□□□□ 0.54
CIT-206ENST00000536008 SETD4Q9NVD3 440 aa18.42■□□□□ 0.54
CIT-206ENST00000536008 MSH4O15457 936 aa18.41■□□□□ 0.54
CIT-206ENST00000536008 TREHO43280 583 aa18.41■□□□□ 0.54
CIT-206ENST00000536008 CAND2O75155 1236 aa18.41■□□□□ 0.54
CIT-206ENST00000536008 TDP2O95551 362 aa18.41■□□□□ 0.54
CIT-206ENST00000536008 MMP1P03956 469 aa18.41■□□□□ 0.54
CIT-206ENST00000536008 GCFC2P16383 781 aaKnown RBP18.41■□□□□ 0.54
CIT-206ENST00000536008 MARK3P27448 753 aa18.41■□□□□ 0.54
CIT-206ENST00000536008 PPFIA1Q13136 1202 aa18.41■□□□□ 0.54
CIT-206ENST00000536008 FAM160B1Q5W0V3 765 aa18.41■□□□□ 0.54
CIT-206ENST00000536008 MIS18BP1Q6P0N0 1132 aa18.41■□□□□ 0.54
CIT-206ENST00000536008 NEK8Q86SG6 692 aa18.41■□□□□ 0.54
CIT-206ENST00000536008 HERVK_113Q902F9 699 aa18.41■□□□□ 0.54
CIT-206ENST00000536008 SLC5A5Q92911 643 aa18.41■□□□□ 0.54
CIT-206ENST00000536008 VWCEQ96DN2 955 aa18.41■□□□□ 0.54
CIT-206ENST00000536008 SLC34A2O95436 690 aa18.4■□□□□ 0.54
CIT-206ENST00000536008 SMAD3P84022 425 aaKnown RBP18.4■□□□□ 0.54
CIT-206ENST00000536008 GRIK4Q16099 956 aa18.4■□□□□ 0.54
CIT-206ENST00000536008 KRT40Q6A162 431 aa18.4■□□□□ 0.54
CIT-206ENST00000536008 PPP4R3AQ6IN85 833 aa18.4■□□□□ 0.54
CIT-206ENST00000536008 PIK3AP1Q6ZUJ8 805 aa18.4■□□□□ 0.54
CIT-206ENST00000536008 TNFRSF25Q93038 417 aa18.4■□□□□ 0.54
CIT-206ENST00000536008 WNT8BQ93098 351 aa18.4■□□□□ 0.54
CIT-206ENST00000536008 BACH2Q9BYV9 841 aa18.4■□□□□ 0.54
CIT-206ENST00000536008 MBLAC1A4D2B0 266 aaPredicted RBP18.39■□□□□ 0.53
CIT-206ENST00000536008 RRN3P2A6NIE6 340 aa18.39■□□□□ 0.53
CIT-206ENST00000536008 BACH1O14867 736 aa18.39■□□□□ 0.53
CIT-206ENST00000536008 GAS7O60861 476 aa18.39■□□□□ 0.53
CIT-206ENST00000536008 MCM2P49736 904 aa18.39■□□□□ 0.53
CIT-206ENST00000536008 NR5A1Q13285 461 aa18.39■□□□□ 0.53
CIT-206ENST00000536008 PLCB4Q15147 1175 aa18.39■□□□□ 0.53
CIT-206ENST00000536008 LETM2Q2VYF4 491 aa18.39■□□□□ 0.53
CIT-206ENST00000536008 ZNF618Q5T7W0 954 aa18.39■□□□□ 0.53
CIT-206ENST00000536008 LRCH2Q5VUJ6 765 aa18.39■□□□□ 0.53
CIT-206ENST00000536008 TAF2Q6P1X5 1199 aa18.39■□□□□ 0.53
CIT-206ENST00000536008 DEFB128Q7Z7B8 93 aa18.39■□□□□ 0.53
CIT-206ENST00000536008 CCDC60Q8IWA6 550 aaPredicted RBP18.39■□□□□ 0.53
CIT-206ENST00000536008 DIS3L2Q8IYB7 885 aaKnown RBP18.39■□□□□ 0.53
CIT-206ENST00000536008 UIMC1Q96RL1 719 aa18.39■□□□□ 0.53
CIT-206ENST00000536008 TEKT3Q9BXF9 490 aa18.39■□□□□ 0.53
CIT-206ENST00000536008 ZNF302Q9NR11 478 aa18.39■□□□□ 0.53
CIT-206ENST00000536008 DDX25Q9UHL0 483 aaKnown RBP18.39■□□□□ 0.53
CIT-206ENST00000536008 TRPC6Q9Y210 931 aa18.39■□□□□ 0.53
CIT-206ENST00000536008 PCDHA10Q9Y5I2 948 aa18.39■□□□□ 0.53
CIT-206ENST00000536008 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.38■□□□□ 0.53
CIT-206ENST00000536008 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.38■□□□□ 0.53
CIT-206ENST00000536008 WDR64B1ANS9 1081 aa18.38■□□□□ 0.53
CIT-206ENST00000536008 PSMD10O75832 226 aa18.38■□□□□ 0.53
CIT-206ENST00000536008 PSAPP07602 524 aa18.38■□□□□ 0.53
CIT-206ENST00000536008 ACTN1P12814 892 aa18.38■□□□□ 0.53
CIT-206ENST00000536008 SFNP31947 248 aa18.38■□□□□ 0.53
CIT-206ENST00000536008 THPOP40225 353 aa18.38■□□□□ 0.53
CIT-206ENST00000536008 TRAF7Q6Q0C0 670 aa18.38■□□□□ 0.53
CIT-206ENST00000536008 RPAINQ86UA6 219 aa18.38■□□□□ 0.53
CIT-206ENST00000536008 ETNPPLQ8TBG4 499 aa18.38■□□□□ 0.53
CIT-206ENST00000536008 TUBE1Q9UJT0 475 aa18.38■□□□□ 0.53
CIT-206ENST00000536008 MAFBQ9Y5Q3 323 aaPredicted RBP18.38■□□□□ 0.53
CIT-206ENST00000536008 TRIP12Q14669 1992 aaPredicted RBP18.38■□□□□ 0.53
CIT-206ENST00000536008 SCN5AQ14524 2016 aa18.37■□□□□ 0.53
CIT-206ENST00000536008 POTEB3A0JP26 581 aa18.37■□□□□ 0.53
CIT-206ENST00000536008 BTBD18B2RXH4 712 aa18.37■□□□□ 0.53
CIT-206ENST00000536008 CXCL10P02778 98 aa18.37■□□□□ 0.53
CIT-206ENST00000536008 RPLP2P05387 115 aaKnown RBP18.37■□□□□ 0.53
CIT-206ENST00000536008 INSRRP14616 1297 aa18.37■□□□□ 0.53
CIT-206ENST00000536008 JAK3P52333 1124 aa18.37■□□□□ 0.53
CIT-206ENST00000536008 GPNMBQ14956 572 aa18.37■□□□□ 0.53
CIT-206ENST00000536008 SAFBQ15424 915 aaKnown RBP eCLIP18.37■□□□□ 0.53
CIT-206ENST00000536008 EARS2Q5JPH6 523 aaKnown RBP18.37■□□□□ 0.53
CIT-206ENST00000536008 SWSAP1Q6NVH7 229 aa18.37■□□□□ 0.53
CIT-206ENST00000536008 PDXDC2PQ6P474 469 aa18.37■□□□□ 0.53
CIT-206ENST00000536008 POTEBQ6S5H4 581 aa18.37■□□□□ 0.53
CIT-206ENST00000536008 OTOP2Q7RTS6 562 aa18.37■□□□□ 0.53
CIT-206ENST00000536008 FAM184AQ8NB25 1140 aa18.37■□□□□ 0.53
CIT-206ENST00000536008 RDM1Q8NG50 284 aa18.37■□□□□ 0.53
CIT-206ENST00000536008 ATP8B4Q8TF62 1192 aa18.37■□□□□ 0.53
CIT-206ENST00000536008 C8orf76Q96K31 380 aa18.37■□□□□ 0.53
CIT-206ENST00000536008 FTOQ9C0B1 505 aaKnown RBP eCLIP18.37■□□□□ 0.53
CIT-206ENST00000536008 DISC1Q9NRI5 854 aa18.37■□□□□ 0.53
CIT-206ENST00000536008 SAMM50Q9Y512 469 aa18.37■□□□□ 0.53
CIT-206ENST00000536008 RSPH10B2B2RC85 870 aa18.36■□□□□ 0.53
CIT-206ENST00000536008 TBX3O15119 743 aa18.36■□□□□ 0.53
CIT-206ENST00000536008 SLC37A4O43826 429 aa18.36■□□□□ 0.53
CIT-206ENST00000536008 HBP1O60381 514 aa18.36■□□□□ 0.53
CIT-206ENST00000536008 CCNT1O60563 726 aaKnown RBP18.36■□□□□ 0.53
CIT-206ENST00000536008 NBNO60934 754 aa18.36■□□□□ 0.53
CIT-206ENST00000536008 COL1A2P08123 1366 aa18.36■□□□□ 0.53
CIT-206ENST00000536008 RSPH10BP0C881 870 aa18.36■□□□□ 0.53
CIT-206ENST00000536008 FOSBP53539 338 aa18.36■□□□□ 0.53
CIT-206ENST00000536008 MARCH8Q5T0T0 291 aa18.36■□□□□ 0.53
CIT-206ENST00000536008 FAM109BQ6ICB4 259 aaPredicted RBP18.36■□□□□ 0.53
CIT-206ENST00000536008 FAM20AQ96MK3 541 aa18.36■□□□□ 0.53
CIT-206ENST00000536008 KCNMB3Q9NPA1 279 aa18.36■□□□□ 0.53
CIT-206ENST00000536008 CXXC1Q9P0U4 656 aaPredicted RBP18.36■□□□□ 0.53
CIT-206ENST00000536008 IGSF9BQ9UPX0 1349 aa18.36■□□□□ 0.53
CIT-206ENST00000536008 LAMA2P24043 3122 aaKnown RBP18.36■□□□□ 0.53
CIT-206ENST00000536008 KAT6AQ92794 2004 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms