RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 CEP55Q53EZ4 464 aa15.09■□□□□ 0.01
CLSTN3-205ENST00000535452 MIS18BP1Q6P0N0 1132 aa15.09■□□□□ 0.01
CLSTN3-205ENST00000535452 TSHZ1Q6ZSZ6 1077 aa15.09■□□□□ 0.01
CLSTN3-205ENST00000535452 TMEM192Q8IY95 271 aa15.09■□□□□ 0.01
CLSTN3-205ENST00000535452 BANK1Q8NDB2 785 aa15.09■□□□□ 0.01
CLSTN3-205ENST00000535452 BICD2Q8TD16 824 aa15.09■□□□□ 0.01
CLSTN3-205ENST00000535452 DNAJB3Q8WWF6 145 aa15.09■□□□□ 0.01
CLSTN3-205ENST00000535452 C17orf80Q9BSJ5 609 aa15.09■□□□□ 0.01
CLSTN3-205ENST00000535452 ANO3Q9BYT9 981 aa15.09■□□□□ 0.01
CLSTN3-205ENST00000535452 UBE2ZQ9H832 354 aaPredicted RBP15.09■□□□□ 0.01
CLSTN3-205ENST00000535452 HCN4Q9Y3Q4 1203 aa15.09■□□□□ 0.01
CLSTN3-205ENST00000535452 NFASCO94856 1347 aa15.09■□□□□ 0.01
CLSTN3-205ENST00000535452 ATP9AO75110 1047 aa15.08■□□□□ 0
CLSTN3-205ENST00000535452 KCNA5P22460 613 aa15.08■□□□□ 0
CLSTN3-205ENST00000535452 PSMA5P28066 241 aa15.08■□□□□ 0
CLSTN3-205ENST00000535452 MRPS6P82932 125 aaKnown RBP15.08■□□□□ 0
CLSTN3-205ENST00000535452 SETQ01105 290 aaPredicted RBP15.08■□□□□ 0
CLSTN3-205ENST00000535452 HIC1Q14526 733 aa15.08■□□□□ 0
CLSTN3-205ENST00000535452 WWC2Q6AWC2 1192 aa15.08■□□□□ 0
CLSTN3-205ENST00000535452 PLPPR4Q7Z2D5 763 aa15.08■□□□□ 0
CLSTN3-205ENST00000535452 NME8Q8N427 588 aa15.08■□□□□ 0
CLSTN3-205ENST00000535452 CCDC148Q8NFR7 591 aa15.08■□□□□ 0
CLSTN3-205ENST00000535452 SP7Q8TDD2 431 aaPredicted RBP15.08■□□□□ 0
CLSTN3-205ENST00000535452 LMAN2LQ9H0V9 348 aa15.08■□□□□ 0
CLSTN3-205ENST00000535452 NSUN3Q9H649 340 aaKnown RBP15.08■□□□□ 0
CLSTN3-205ENST00000535452 BCAS3Q9H6U6 928 aa15.08■□□□□ 0
CLSTN3-205ENST00000535452 CDY2AQ9Y6F7 541 aa15.08■□□□□ 0
CLSTN3-205ENST00000535452 GSTTP1A0A1W2PQM5 241 aa15.07■□□□□ 0
CLSTN3-205ENST00000535452 POTEB3A0JP26 581 aa15.07■□□□□ 0
CLSTN3-205ENST00000535452 H3BNC9 293 aa15.07■□□□□ 0
CLSTN3-205ENST00000535452 LPXNO60711 386 aa15.07■□□□□ 0
CLSTN3-205ENST00000535452 ARHGEF15O94989 841 aa15.07■□□□□ 0
CLSTN3-205ENST00000535452 REC8O95072 547 aa15.07■□□□□ 0
CLSTN3-205ENST00000535452 INSRRP14616 1297 aa15.07■□□□□ 0
CLSTN3-205ENST00000535452 ACTR2P61160 394 aa15.07■□□□□ 0
CLSTN3-205ENST00000535452 BLOC1S2Q6QNY1 142 aa15.07■□□□□ 0
CLSTN3-205ENST00000535452 POTEBQ6S5H4 581 aa15.07■□□□□ 0
CLSTN3-205ENST00000535452 BARHL2Q9NY43 387 aa15.07■□□□□ 0
CLSTN3-205ENST00000535452 CEP131Q9UPN4 1083 aa15.07■□□□□ 0
CLSTN3-205ENST00000535452 GINS2Q9Y248 185 aa15.07■□□□□ 0
CLSTN3-205ENST00000535452 TRPV2Q9Y5S1 764 aa15.07■□□□□ 0
CLSTN3-205ENST00000535452 SQORQ9Y6N5 450 aa15.07■□□□□ 0
CLSTN3-205ENST00000535452 ADGRA3Q8IWK6 1321 aa15.07■□□□□ 0
CLSTN3-205ENST00000535452 CNTNAP5Q8WYK1 1306 aa15.07■□□□□ 0
CLSTN3-205ENST00000535452 CDH23Q9H251 3354 aa15.06■□□□□ 0
CLSTN3-205ENST00000535452 DDX39AO00148 427 aaKnown RBP15.06■□□□□ 0
CLSTN3-205ENST00000535452 HBP1O60381 514 aa15.06■□□□□ 0
CLSTN3-205ENST00000535452 SPOUT1Q5T280 376 aaKnown RBP15.06■□□□□ 0
CLSTN3-205ENST00000535452 PLA2G4DQ86XP0 818 aa15.06■□□□□ 0
CLSTN3-205ENST00000535452 REXO1Q8N1G1 1221 aaKnown RBP15.06■□□□□ 0
CLSTN3-205ENST00000535452 TET1Q8NFU7 2136 aa15.06■□□□□ 0
CLSTN3-205ENST00000535452 CCDC136Q96JN2 1154 aa15.06■□□□□ 0
CLSTN3-205ENST00000535452 NECAB3Q96P71 396 aaPredicted RBP15.06■□□□□ 0
CLSTN3-205ENST00000535452 AAASQ9NRG9 546 aa15.06■□□□□ 0
CLSTN3-205ENST00000535452 TBC1D22BQ9NU19 505 aa15.06■□□□□ 0
CLSTN3-205ENST00000535452 SAMM50Q9Y512 469 aa15.06■□□□□ 0
CLSTN3-205ENST00000535452 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.05■□□□□ -0
CLSTN3-205ENST00000535452 DENND3A2RUS2 1198 aa15.05■□□□□ -0
CLSTN3-205ENST00000535452 MBLAC1A4D2B0 266 aaPredicted RBP15.05■□□□□ -0
CLSTN3-205ENST00000535452 CHRNA1P02708 482 aa15.05■□□□□ -0
CLSTN3-205ENST00000535452 SCG2P13521 617 aa15.05■□□□□ -0
CLSTN3-205ENST00000535452 IBSPP21815 317 aaPredicted RBP15.05■□□□□ -0
CLSTN3-205ENST00000535452 SREBF1P36956 1147 aa15.05■□□□□ -0
CLSTN3-205ENST00000535452 ADAM17P78536 824 aa15.05■□□□□ -0
CLSTN3-205ENST00000535452 KRT76Q01546 638 aa15.05■□□□□ -0
CLSTN3-205ENST00000535452 LPIN1Q14693 890 aa15.05■□□□□ -0
CLSTN3-205ENST00000535452 CSPP1Q1MSJ5 1256 aa15.05■□□□□ -0
CLSTN3-205ENST00000535452 TCTN1Q2MV58 587 aa15.05■□□□□ -0
CLSTN3-205ENST00000535452 TSGA10IPQ3SY00 556 aa15.05■□□□□ -0
CLSTN3-205ENST00000535452 LEXMQ3ZCV2 418 aa15.05■□□□□ -0
CLSTN3-205ENST00000535452 FBXO47Q5MNV8 452 aa15.05■□□□□ -0
CLSTN3-205ENST00000535452 PTCRAQ6ISU1 281 aaPredicted RBP15.05■□□□□ -0
CLSTN3-205ENST00000535452 PDXDC2PQ6P474 469 aa15.05■□□□□ -0
CLSTN3-205ENST00000535452 CPLX2Q6PUV4 134 aaKnown RBP15.05■□□□□ -0
CLSTN3-205ENST00000535452 RUFY4Q6ZNE9 571 aa15.05■□□□□ -0
CLSTN3-205ENST00000535452 NIPA1Q7RTP0 329 aa15.05■□□□□ -0
CLSTN3-205ENST00000535452 TRIM22Q8IYM9 498 aa15.05■□□□□ -0
CLSTN3-205ENST00000535452 TCEANC2Q96MN5 208 aa15.05■□□□□ -0
CLSTN3-205ENST00000535452 JAKMIP1Q96N16 626 aaKnown RBP15.05■□□□□ -0
CLSTN3-205ENST00000535452 ZNF577Q9BSK1 485 aa15.05■□□□□ -0
CLSTN3-205ENST00000535452 PLVAPQ9BX97 442 aa15.05■□□□□ -0
CLSTN3-205ENST00000535452 AGO4Q9HCK5 861 aaKnown RBP15.05■□□□□ -0
CLSTN3-205ENST00000535452 ZNF302Q9NR11 478 aa15.05■□□□□ -0
CLSTN3-205ENST00000535452 PCDHA2Q9Y5H9 948 aa15.05■□□□□ -0
CLSTN3-205ENST00000535452 KAT6AQ92794 2004 aa15.05■□□□□ -0
CLSTN3-205ENST00000535452 SMIM35A0A1B0GVV1 85 aa15.04■□□□□ -0
CLSTN3-205ENST00000535452 STXBP3O00186 592 aa15.04■□□□□ -0
CLSTN3-205ENST00000535452 ALADP13716 330 aa15.04■□□□□ -0
CLSTN3-205ENST00000535452 TMOD1P28289 359 aa15.04■□□□□ -0
CLSTN3-205ENST00000535452 NFX1Q12986 1120 aaKnown RBP15.04■□□□□ -0
CLSTN3-205ENST00000535452 PFKFB3Q16875 520 aaPredicted RBP15.04■□□□□ -0
CLSTN3-205ENST00000535452 ZNF484Q5JVG2 852 aa15.04■□□□□ -0
CLSTN3-205ENST00000535452 TMEM31Q5JXX7 168 aa15.04■□□□□ -0
CLSTN3-205ENST00000535452 JAKMIP3Q5VZ66 844 aa15.04■□□□□ -0
CLSTN3-205ENST00000535452 NPAS4Q8IUM7 802 aa15.04■□□□□ -0
CLSTN3-205ENST00000535452 PGBD1Q96JS3 809 aa15.04■□□□□ -0
CLSTN3-205ENST00000535452 CELF4Q9BZC1 486 aaKnown RBP15.04■□□□□ -0
CLSTN3-205ENST00000535452 C22orf23Q9BZE7 217 aa15.04■□□□□ -0
CLSTN3-205ENST00000535452 CLDND1Q9NY35 253 aa15.04■□□□□ -0
CLSTN3-205ENST00000535452 PCDHB7Q9Y5E2 793 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms