RNA–Protein interactions for RNA: ENST00000535147.5

DDB1-204, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,789 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-204ENST00000535147 POTEGQ6S5H5 508 aa11.24□□□□□ -0.61
DDB1-204ENST00000535147 POTEEQ6S8J3 1075 aa11.24□□□□□ -0.61
DDB1-204ENST00000535147 WHAMMQ8TF30 809 aa11.24□□□□□ -0.61
DDB1-204ENST00000535147 SPAG5Q96R06 1193 aa11.24□□□□□ -0.61
DDB1-204ENST00000535147 EPN3Q9H201 632 aa11.24□□□□□ -0.61
DDB1-204ENST00000535147 TAF1DQ9H5J8 278 aaPredicted RBP11.24□□□□□ -0.61
DDB1-204ENST00000535147 TMCO5BA8MYB1 307 aa11.24□□□□□ -0.61
DDB1-204ENST00000535147 hCG_1984214I3L0E3 225 aa11.24□□□□□ -0.61
DDB1-204ENST00000535147 MED24O75448 989 aa11.24□□□□□ -0.61
DDB1-204ENST00000535147 FLT3P36888 993 aa11.24□□□□□ -0.61
DDB1-204ENST00000535147 HSD17B3P37058 310 aa11.24□□□□□ -0.61
DDB1-204ENST00000535147 MDH1P40925 334 aaKnown RBP11.24□□□□□ -0.61
DDB1-204ENST00000535147 CLK2P49760 499 aaKnown RBP11.24□□□□□ -0.61
DDB1-204ENST00000535147 ZNF543Q08ER8 600 aa11.24□□□□□ -0.61
DDB1-204ENST00000535147 ITGB3BPQ13352 177 aaPredicted RBP11.24□□□□□ -0.61
DDB1-204ENST00000535147 PTGISQ16647 500 aa11.24□□□□□ -0.61
DDB1-204ENST00000535147 ARHGAP27Q6ZUM4 889 aa11.24□□□□□ -0.61
DDB1-204ENST00000535147 B4GALNT4Q76KP1 1039 aa11.24□□□□□ -0.61
DDB1-204ENST00000535147 OTUD6BQ8N6M0 293 aa11.24□□□□□ -0.61
DDB1-204ENST00000535147 ZNF713Q8N859 430 aaPredicted RBP11.24□□□□□ -0.61
DDB1-204ENST00000535147 ZNF473Q8WTR7 871 aaKnown RBP11.24□□□□□ -0.61
DDB1-204ENST00000535147 CUL5Q93034 780 aa11.24□□□□□ -0.61
DDB1-204ENST00000535147 PSTPIP2Q9H939 334 aa11.24□□□□□ -0.61
DDB1-204ENST00000535147 PPANQ9NQ55 473 aaKnown RBP11.24□□□□□ -0.61
DDB1-204ENST00000535147 TMEM59LQ9UK28 342 aa11.24□□□□□ -0.61
DDB1-204ENST00000535147 HDAC9Q9UKV0 1011 aa11.24□□□□□ -0.61
DDB1-204ENST00000535147 SBF2Q86WG5 1849 aa11.24□□□□□ -0.61
DDB1-204ENST00000535147 CDK5RAP2Q96SN8 1893 aa11.24□□□□□ -0.61
DDB1-204ENST00000535147 CETN3O15182 167 aa11.23□□□□□ -0.61
DDB1-204ENST00000535147 SART1O43290 800 aaKnown RBP11.23□□□□□ -0.61
DDB1-204ENST00000535147 KIAA0754O94854 1291 aa11.23□□□□□ -0.61
DDB1-204ENST00000535147 GNA14O95837 355 aa11.23□□□□□ -0.61
DDB1-204ENST00000535147 SNHG28P0DPA3 235 aa11.23□□□□□ -0.61
DDB1-204ENST00000535147 MYBP10242 640 aa11.23□□□□□ -0.61
DDB1-204ENST00000535147 ITGA4P13612 1032 aa11.23□□□□□ -0.61
DDB1-204ENST00000535147 UCHL3P15374 230 aa11.23□□□□□ -0.61
DDB1-204ENST00000535147 GUCY2CP25092 1073 aa11.23□□□□□ -0.61
DDB1-204ENST00000535147 HSPA9P38646 679 aaKnown RBP11.23□□□□□ -0.61
DDB1-204ENST00000535147 MARSP56192 900 aaKnown RBP11.23□□□□□ -0.61
DDB1-204ENST00000535147 PSMC6P62333 389 aa11.23□□□□□ -0.61
DDB1-204ENST00000535147 SEPT2Q15019 361 aa11.23□□□□□ -0.61
DDB1-204ENST00000535147 UAP1Q16222 522 aaPredicted RBP11.23□□□□□ -0.61
DDB1-204ENST00000535147 DCAF17Q5H9S7 520 aaPredicted RBP11.23□□□□□ -0.61
DDB1-204ENST00000535147 FOXR2Q6PJQ5 311 aa11.23□□□□□ -0.61
DDB1-204ENST00000535147 CD302Q8IX05 232 aa11.23□□□□□ -0.61
DDB1-204ENST00000535147 RBM46Q8TBY0 533 aaKnown RBP11.23□□□□□ -0.61
DDB1-204ENST00000535147 CCT8L2Q96SF2 557 aa11.23□□□□□ -0.61
DDB1-204ENST00000535147 NT5C3AQ9H0P0 336 aa11.23□□□□□ -0.61
DDB1-204ENST00000535147 NAGPAQ9UK23 515 aa11.23□□□□□ -0.61
DDB1-204ENST00000535147 AJAP1Q9UKB5 411 aaPredicted RBP11.23□□□□□ -0.61
DDB1-204ENST00000535147 RTCBQ9Y3I0 505 aaKnown RBP11.23□□□□□ -0.61
DDB1-204ENST00000535147 TNRC6CQ9HCJ0 1690 aaKnown RBP11.23□□□□□ -0.61
DDB1-204ENST00000535147 MYH7BA7E2Y1 1941 aa11.23□□□□□ -0.61
DDB1-204ENST00000535147 E7EVH7 732 aa11.23□□□□□ -0.61
DDB1-204ENST00000535147 BACH1O14867 736 aa11.23□□□□□ -0.61
DDB1-204ENST00000535147 MEFVO15553 781 aaPredicted RBP11.23□□□□□ -0.61
DDB1-204ENST00000535147 RFC4P35249 363 aa11.23□□□□□ -0.61
DDB1-204ENST00000535147 USP11P51784 963 aa11.23□□□□□ -0.61
DDB1-204ENST00000535147 DPY19L2P1Q6NXN4 242 aa11.23□□□□□ -0.61
DDB1-204ENST00000535147 ALKBH5Q6P6C2 394 aaKnown RBP11.23□□□□□ -0.61
DDB1-204ENST00000535147 GJB7Q6PEY0 223 aa11.23□□□□□ -0.61
DDB1-204ENST00000535147 NLRP14Q86W24 1093 aa11.23□□□□□ -0.61
DDB1-204ENST00000535147 METTL13Q8N6R0 699 aa11.23□□□□□ -0.61
DDB1-204ENST00000535147 MYCBPAPQ8TBZ2 947 aa11.23□□□□□ -0.61
DDB1-204ENST00000535147 ISCUQ9H1K1 167 aa11.23□□□□□ -0.61
DDB1-204ENST00000535147 AMACRQ9UHK6 382 aa11.23□□□□□ -0.61
DDB1-204ENST00000535147 MYH4Q9Y623 1939 aa11.23□□□□□ -0.61
DDB1-204ENST00000535147 A6NNZ2 444 aa11.22□□□□□ -0.61
DDB1-204ENST00000535147 H0YHG0 523 aa11.22□□□□□ -0.61
DDB1-204ENST00000535147 PLCG2P16885 1265 aa11.22□□□□□ -0.61
DDB1-204ENST00000535147 MRPL12P52815 198 aaKnown RBP11.22□□□□□ -0.61
DDB1-204ENST00000535147 PABPC4Q13310 644 aaKnown RBP eCLIP11.22□□□□□ -0.61
DDB1-204ENST00000535147 TUBB8Q3ZCM7 444 aa11.22□□□□□ -0.61
DDB1-204ENST00000535147 RNF187Q5TA31 235 aaPredicted RBP11.22□□□□□ -0.61
DDB1-204ENST00000535147 TCERG1LQ5VWI1 586 aa11.22□□□□□ -0.61
DDB1-204ENST00000535147 PIAS4Q8N2W9 510 aaPredicted RBP11.22□□□□□ -0.61
DDB1-204ENST00000535147 LRRC57Q8N9N7 239 aa11.22□□□□□ -0.61
DDB1-204ENST00000535147 SCFD2Q8WU76 684 aa11.22□□□□□ -0.61
DDB1-204ENST00000535147 TMBIM4Q9HC24 238 aa11.22□□□□□ -0.61
DDB1-204ENST00000535147 DDX4Q9NQI0 724 aaKnown RBP11.22□□□□□ -0.61
DDB1-204ENST00000535147 ARMCX3Q9UH62 379 aaPredicted RBP11.22□□□□□ -0.61
DDB1-204ENST00000535147 DAGLAQ9Y4D2 1042 aa11.22□□□□□ -0.61
DDB1-204ENST00000535147 HMGB1P1B2RPK0 211 aaPredicted RBP11.22□□□□□ -0.61
DDB1-204ENST00000535147 PON1P27169 355 aa11.22□□□□□ -0.61
DDB1-204ENST00000535147 HOXD13P35453 343 aa11.22□□□□□ -0.61
DDB1-204ENST00000535147 IFT88Q13099 833 aa11.22□□□□□ -0.61
DDB1-204ENST00000535147 HYIQ5T013 277 aa11.22□□□□□ -0.61
DDB1-204ENST00000535147 SUGP1Q8IWZ8 645 aaKnown RBP11.22□□□□□ -0.61
DDB1-204ENST00000535147 ZNF526Q8TF50 670 aaPredicted RBP11.22□□□□□ -0.61
DDB1-204ENST00000535147 IKZF4Q9H2S9 585 aa11.22□□□□□ -0.61
DDB1-204ENST00000535147 LRRC4CQ9HCJ2 640 aa11.22□□□□□ -0.61
DDB1-204ENST00000535147 NOC2LQ9Y3T9 749 aaKnown RBP11.22□□□□□ -0.61
DDB1-204ENST00000535147 KDM3AQ9Y4C1 1321 aa11.22□□□□□ -0.61
DDB1-204ENST00000535147 MPHOSPH10O00566 681 aaKnown RBP11.22□□□□□ -0.61
DDB1-204ENST00000535147 DAPK3O43293 454 aa11.22□□□□□ -0.61
DDB1-204ENST00000535147 TTLL1O95922 423 aa11.22□□□□□ -0.61
DDB1-204ENST00000535147 TMOD1P28289 359 aa11.22□□□□□ -0.61
DDB1-204ENST00000535147 CTNNA1P35221 906 aaKnown RBP11.22□□□□□ -0.61
DDB1-204ENST00000535147 FNTAP49354 379 aa11.22□□□□□ -0.61
DDB1-204ENST00000535147 CASP4P49662 377 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms