RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 TMEM192Q8IY95 271 aa11.57□□□□□ -0.56
CLSTN3-203ENST00000534830 CUL5Q93034 780 aa11.57□□□□□ -0.56
CLSTN3-203ENST00000534830 GPR20Q99678 358 aa11.57□□□□□ -0.56
CLSTN3-203ENST00000534830 USP26Q9BXU7 913 aa11.57□□□□□ -0.56
CLSTN3-203ENST00000534830 TUT1Q9H6E5 874 aaKnown RBP11.57□□□□□ -0.56
CLSTN3-203ENST00000534830 PSTPIP2Q9H939 334 aa11.57□□□□□ -0.56
CLSTN3-203ENST00000534830 FAM217BQ9NTX9 383 aaPredicted RBP11.57□□□□□ -0.56
CLSTN3-203ENST00000534830 BRPF3Q9ULD4 1205 aa11.57□□□□□ -0.56
CLSTN3-203ENST00000534830 TELO2Q9Y4R8 837 aa11.57□□□□□ -0.56
CLSTN3-203ENST00000534830 CACNA1HO95180 2353 aa11.57□□□□□ -0.56
CLSTN3-203ENST00000534830 CNTNAP5Q8WYK1 1306 aa11.57□□□□□ -0.56
CLSTN3-203ENST00000534830 ATP9AO75110 1047 aa11.56□□□□□ -0.56
CLSTN3-203ENST00000534830 CDC45O75419 566 aa11.56□□□□□ -0.56
CLSTN3-203ENST00000534830 LGR5O75473 907 aa11.56□□□□□ -0.56
CLSTN3-203ENST00000534830 UPP2O95045 317 aa11.56□□□□□ -0.56
CLSTN3-203ENST00000534830 ADAM17P78536 824 aa11.56□□□□□ -0.56
CLSTN3-203ENST00000534830 HTRA4P83105 476 aaPredicted RBP11.56□□□□□ -0.56
CLSTN3-203ENST00000534830 MKRN4PQ13434 485 aaPredicted RBP11.56□□□□□ -0.56
CLSTN3-203ENST00000534830 MBTPS1Q14703 1052 aa11.56□□□□□ -0.56
CLSTN3-203ENST00000534830 ZNF618Q5T7W0 954 aa11.56□□□□□ -0.56
CLSTN3-203ENST00000534830 SERINC5Q86VE9 423 aa11.56□□□□□ -0.56
CLSTN3-203ENST00000534830 NLRC5Q86WI3 1866 aa11.56□□□□□ -0.56
CLSTN3-203ENST00000534830 KMT2EQ8IZD2 1858 aa11.56□□□□□ -0.56
CLSTN3-203ENST00000534830 FBXL6Q8N531 539 aa11.56□□□□□ -0.56
CLSTN3-203ENST00000534830 SP7Q8TDD2 431 aaPredicted RBP11.56□□□□□ -0.56
CLSTN3-203ENST00000534830 GPRASP2Q96D09 838 aa11.56□□□□□ -0.56
CLSTN3-203ENST00000534830 IRF2BPLQ9H1B7 796 aa11.56□□□□□ -0.56
CLSTN3-203ENST00000534830 RNPEPQ9H4A4 650 aa11.56□□□□□ -0.56
CLSTN3-203ENST00000534830 RBM28Q9NW13 759 aaKnown RBP11.56□□□□□ -0.56
CLSTN3-203ENST00000534830 UBIAD1Q9Y5Z9 338 aa11.56□□□□□ -0.56
CLSTN3-203ENST00000534830 hCG_1642624A0A1W2PR95 340 aa11.55□□□□□ -0.56
CLSTN3-203ENST00000534830 CSPG5O95196 566 aa11.55□□□□□ -0.56
CLSTN3-203ENST00000534830 SMIM10L2AP0DMW4 78 aa11.55□□□□□ -0.56
CLSTN3-203ENST00000534830 SMIM10L2BP0DMW5 78 aa11.55□□□□□ -0.56
CLSTN3-203ENST00000534830 KCNA2P16389 499 aa11.55□□□□□ -0.56
CLSTN3-203ENST00000534830 ITGB5P18084 799 aa11.55□□□□□ -0.56
CLSTN3-203ENST00000534830 RCAN1P53805 252 aa11.55□□□□□ -0.56
CLSTN3-203ENST00000534830 SMAD4Q13485 552 aaKnown RBP11.55□□□□□ -0.56
CLSTN3-203ENST00000534830 CTC1Q2NKJ3 1217 aa11.55□□□□□ -0.56
CLSTN3-203ENST00000534830 TYW1BQ6NUM6 668 aa11.55□□□□□ -0.56
CLSTN3-203ENST00000534830 MICU3Q86XE3 530 aa11.55□□□□□ -0.56
CLSTN3-203ENST00000534830 TEX2Q8IWB9 1127 aa11.55□□□□□ -0.56
CLSTN3-203ENST00000534830 FBXL16Q8N461 479 aa11.55□□□□□ -0.56
CLSTN3-203ENST00000534830 CCDC82Q8N4S0 544 aa11.55□□□□□ -0.56
CLSTN3-203ENST00000534830 DBF4BQ8NFT6 615 aa11.55□□□□□ -0.56
CLSTN3-203ENST00000534830 TCEANC2Q96MN5 208 aa11.55□□□□□ -0.56
CLSTN3-203ENST00000534830 IGFLR1Q9H665 355 aa11.55□□□□□ -0.56
CLSTN3-203ENST00000534830 PCDHA6Q9UN73 950 aa11.55□□□□□ -0.56
CLSTN3-203ENST00000534830 PCDHA8Q9Y5H6 950 aa11.55□□□□□ -0.56
CLSTN3-203ENST00000534830 C17orf102A2RUQ5 167 aa11.54□□□□□ -0.56
CLSTN3-203ENST00000534830 MAFGO15525 162 aa11.54□□□□□ -0.56
CLSTN3-203ENST00000534830 TREHO43280 583 aa11.54□□□□□ -0.56
CLSTN3-203ENST00000534830 CDC27P30260 824 aa11.54□□□□□ -0.56
CLSTN3-203ENST00000534830 CTNNB1P35222 781 aa11.54□□□□□ -0.56
CLSTN3-203ENST00000534830 VCPP55072 806 aaKnown RBP11.54□□□□□ -0.56
CLSTN3-203ENST00000534830 ZXDAP98168 799 aa11.54□□□□□ -0.56
CLSTN3-203ENST00000534830 HYAL1Q12794 435 aa11.54□□□□□ -0.56
CLSTN3-203ENST00000534830 KRT32Q14532 448 aa11.54□□□□□ -0.56
CLSTN3-203ENST00000534830 UBE2SQ16763 222 aa11.54□□□□□ -0.56
CLSTN3-203ENST00000534830 WWC2Q6AWC2 1192 aa11.54□□□□□ -0.56
CLSTN3-203ENST00000534830 SYNE3Q6ZMZ3 975 aa11.54□□□□□ -0.56
CLSTN3-203ENST00000534830 NLRX1Q86UT6 975 aa11.54□□□□□ -0.56
CLSTN3-203ENST00000534830 GIMAP8Q8ND71 665 aaPredicted RBP11.54□□□□□ -0.56
CLSTN3-203ENST00000534830 RIC8AQ9NPQ8 531 aa11.54□□□□□ -0.56
CLSTN3-203ENST00000534830 JADE2Q9NQC1 790 aa11.54□□□□□ -0.56
CLSTN3-203ENST00000534830 CD207Q9UJ71 328 aa11.54□□□□□ -0.56
CLSTN3-203ENST00000534830 EMSYQ7Z589 1322 aa11.54□□□□□ -0.56
CLSTN3-203ENST00000534830 RIF1Q5UIP0 2472 aaKnown RBP11.53□□□□□ -0.56
CLSTN3-203ENST00000534830 FAM186AA6NE01 2351 aa11.53□□□□□ -0.56
CLSTN3-203ENST00000534830 ATG2AQ2TAZ0 1938 aa11.53□□□□□ -0.56
CLSTN3-203ENST00000534830 GSTTP1A0A1W2PQM5 241 aa11.53□□□□□ -0.56
CLSTN3-203ENST00000534830 H0Y858 1186 aa11.53□□□□□ -0.56
CLSTN3-203ENST00000534830 NOP56O00567 594 aaKnown RBP11.53□□□□□ -0.56
CLSTN3-203ENST00000534830 ZBTB43O43298 467 aa11.53□□□□□ -0.56
CLSTN3-203ENST00000534830 CAND2O75155 1236 aa11.53□□□□□ -0.56
CLSTN3-203ENST00000534830 TBX10O75333 385 aa11.53□□□□□ -0.56
CLSTN3-203ENST00000534830 HMGB1P09429 215 aaKnown RBP11.53□□□□□ -0.56
CLSTN3-203ENST00000534830 HSPA4P34932 840 aa11.53□□□□□ -0.56
CLSTN3-203ENST00000534830 GTF2F1P35269 517 aaKnown RBP eCLIP11.53□□□□□ -0.56
CLSTN3-203ENST00000534830 CLK2P49760 499 aaKnown RBP11.53□□□□□ -0.56
CLSTN3-203ENST00000534830 RTN1Q16799 776 aa11.53□□□□□ -0.56
CLSTN3-203ENST00000534830 ERMP1Q7Z2K6 904 aa11.53□□□□□ -0.56
CLSTN3-203ENST00000534830 ATP6V0A1Q93050 837 aa11.53□□□□□ -0.56
CLSTN3-203ENST00000534830 CDHR1Q96JP9 859 aa11.53□□□□□ -0.56
CLSTN3-203ENST00000534830 AGXT2Q9BYV1 514 aa11.53□□□□□ -0.56
CLSTN3-203ENST00000534830 OSBPL7Q9BZF2 842 aa11.53□□□□□ -0.56
CLSTN3-203ENST00000534830 TLR9Q9NR96 1032 aa11.53□□□□□ -0.56
CLSTN3-203ENST00000534830 PLXNA3P51805 1871 aa11.53□□□□□ -0.56
CLSTN3-203ENST00000534830 NID2Q14112 1375 aa11.53□□□□□ -0.56
CLSTN3-203ENST00000534830 RALGAPA2Q2PPJ7 1873 aa11.53□□□□□ -0.56
CLSTN3-203ENST00000534830 WDR81Q562E7 1941 aa11.52□□□□□ -0.56
CLSTN3-203ENST00000534830 LOXHD1Q8IVV2 1947 aa11.52□□□□□ -0.56
CLSTN3-203ENST00000534830 MYO15AQ9UKN7 3530 aa11.52□□□□□ -0.57
CLSTN3-203ENST00000534830 SPDYE3A6NKU9 549 aa11.52□□□□□ -0.57
CLSTN3-203ENST00000534830 RSPH10B2B2RC85 870 aa11.52□□□□□ -0.57
CLSTN3-203ENST00000534830 hCG_1984214I3L0E3 225 aa11.52□□□□□ -0.57
CLSTN3-203ENST00000534830 LINC01565O15544 149 aa11.52□□□□□ -0.57
CLSTN3-203ENST00000534830 RSPH10BP0C881 870 aa11.52□□□□□ -0.57
CLSTN3-203ENST00000534830 AVPR2P30518 371 aa11.52□□□□□ -0.57
CLSTN3-203ENST00000534830 THPOP40225 353 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms