RNA–Protein interactions for RNA: ENST00000534663.1

RAG1-203, Transcript of recombination activating 1, humanhuman

TSL 1 (best)

Gene RAG1, Length 3,707 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-203ENST00000534663 CLTAP09496 248 aa7.47□□□□□ -1.21
RAG1-203ENST00000534663 H2AFZP0C0S5 128 aa7.47□□□□□ -1.21
RAG1-203ENST00000534663 GSTO1P78417 241 aa7.47□□□□□ -1.21
RAG1-203ENST00000534663 CDK17Q00537 523 aa7.47□□□□□ -1.21
RAG1-203ENST00000534663 TBC1D10BQ4KMP7 808 aaPredicted RBP7.47□□□□□ -1.21
RAG1-203ENST00000534663 SBK1Q52WX2 424 aa7.47□□□□□ -1.21
RAG1-203ENST00000534663 KCNV1Q6PIU1 500 aa7.47□□□□□ -1.21
RAG1-203ENST00000534663 RUFY4Q6ZNE9 571 aa7.47□□□□□ -1.21
RAG1-203ENST00000534663 LRRC55Q6ZSA7 311 aa7.47□□□□□ -1.21
RAG1-203ENST00000534663 H2AFVQ71UI9 128 aa7.47□□□□□ -1.21
RAG1-203ENST00000534663 CCDC13Q8IYE1 715 aa7.47□□□□□ -1.21
RAG1-203ENST00000534663 IQCKQ8N0W5 287 aa7.47□□□□□ -1.21
RAG1-203ENST00000534663 TCP11Q8WWU5 503 aa7.47□□□□□ -1.21
RAG1-203ENST00000534663 CYFIP2Q96F07 1278 aa7.47□□□□□ -1.21
RAG1-203ENST00000534663 LAMB4A4D0S4 1761 aa7.47□□□□□ -1.21
RAG1-203ENST00000534663 PHRF1Q9P1Y6 1649 aaKnown RBP7.47□□□□□ -1.21
RAG1-203ENST00000534663 SSU72P8A0A1W2PR75 194 aa7.47□□□□□ -1.21
RAG1-203ENST00000534663 GMNCA6NCL1 334 aa7.47□□□□□ -1.21
RAG1-203ENST00000534663 SPDYE3A6NKU9 549 aa7.47□□□□□ -1.21
RAG1-203ENST00000534663 DCDC2CA8MYV0 355 aa7.47□□□□□ -1.21
RAG1-203ENST00000534663 TBCAO75347 108 aaKnown RBP7.47□□□□□ -1.21
RAG1-203ENST00000534663 PRLRP16471 622 aa7.47□□□□□ -1.21
RAG1-203ENST00000534663 IFI16Q16666 785 aaKnown RBP7.47□□□□□ -1.21
RAG1-203ENST00000534663 NBPF9Q3BBW0 867 aa7.47□□□□□ -1.21
RAG1-203ENST00000534663 HGSNATQ68CP4 663 aa7.47□□□□□ -1.21
RAG1-203ENST00000534663 KDM7AQ6ZMT4 941 aa7.47□□□□□ -1.21
RAG1-203ENST00000534663 ZNF804AQ7Z570 1209 aa7.47□□□□□ -1.21
RAG1-203ENST00000534663 CCDC26Q8TAB7 109 aa7.47□□□□□ -1.21
RAG1-203ENST00000534663 CAVIN3Q969G5 261 aa7.47□□□□□ -1.21
RAG1-203ENST00000534663 IQCDQ96DY2 449 aa7.47□□□□□ -1.21
RAG1-203ENST00000534663 LZTS2Q9BRK4 669 aa7.47□□□□□ -1.21
RAG1-203ENST00000534663 MLXIPLQ9NP71 852 aa7.47□□□□□ -1.21
RAG1-203ENST00000534663 KLC4Q9NSK0 619 aa7.47□□□□□ -1.21
RAG1-203ENST00000534663 PTPN22Q9Y2R2 807 aa7.47□□□□□ -1.21
RAG1-203ENST00000534663 SNX24Q9Y343 169 aa7.47□□□□□ -1.21
RAG1-203ENST00000534663 PKD1L3Q7Z443 1732 aa7.47□□□□□ -1.21
RAG1-203ENST00000534663 GBP2P32456 591 aaPredicted RBP7.47□□□□□ -1.21
RAG1-203ENST00000534663 SCNN1DP51172 638 aa7.47□□□□□ -1.21
RAG1-203ENST00000534663 RBM5P52756 815 aaKnown RBP eCLIP7.47□□□□□ -1.21
RAG1-203ENST00000534663 MRPL12P52815 198 aaKnown RBP7.47□□□□□ -1.21
RAG1-203ENST00000534663 TCP10Q12799 353 aa7.47□□□□□ -1.21
RAG1-203ENST00000534663 CCDC38Q502W7 563 aa7.47□□□□□ -1.21
RAG1-203ENST00000534663 FAM133BQ5BKY9 247 aaKnown RBP7.47□□□□□ -1.21
RAG1-203ENST00000534663 GKAP1Q5VSY0 366 aaPredicted RBP7.47□□□□□ -1.21
RAG1-203ENST00000534663 HIBCHQ6NVY1 386 aaPredicted RBP7.47□□□□□ -1.21
RAG1-203ENST00000534663 METTL13Q8N6R0 699 aa7.47□□□□□ -1.21
RAG1-203ENST00000534663 FAM212AQ96EL1 285 aa7.47□□□□□ -1.21
RAG1-203ENST00000534663 NUCKS1Q9H1E3 243 aaKnown RBP7.47□□□□□ -1.21
RAG1-203ENST00000534663 GCNT4Q9P109 453 aa7.47□□□□□ -1.21
RAG1-203ENST00000534663 TAF1P21675 1872 aa7.46□□□□□ -1.21
RAG1-203ENST00000534663 NUP188Q5SRE5 1749 aa7.46□□□□□ -1.21
RAG1-203ENST00000534663 A6NNZ2 444 aa7.46□□□□□ -1.21
RAG1-203ENST00000534663 USP17L10C9JJH3 530 aa7.46□□□□□ -1.21
RAG1-203ENST00000534663 FGRP09769 529 aa7.46□□□□□ -1.21
RAG1-203ENST00000534663 PDHBP11177 359 aa7.46□□□□□ -1.21
RAG1-203ENST00000534663 TAL1P17542 331 aaPredicted RBP7.46□□□□□ -1.21
RAG1-203ENST00000534663 KCNA4P22459 653 aa7.46□□□□□ -1.21
RAG1-203ENST00000534663 CYP2J2P51589 502 aa7.46□□□□□ -1.21
RAG1-203ENST00000534663 TUBB8Q3ZCM7 444 aa7.46□□□□□ -1.21
RAG1-203ENST00000534663 MEI1Q5TIA1 1274 aa7.46□□□□□ -1.21
RAG1-203ENST00000534663 ZNF571Q7Z3V5 609 aaPredicted RBP7.46□□□□□ -1.21
RAG1-203ENST00000534663 GLYCTKQ8IVS8 523 aa7.46□□□□□ -1.21
RAG1-203ENST00000534663 RPGRQ92834 1020 aaKnown RBP7.46□□□□□ -1.21
RAG1-203ENST00000534663 GLG1Q92896 1179 aa7.46□□□□□ -1.21
RAG1-203ENST00000534663 CUL5Q93034 780 aa7.46□□□□□ -1.21
RAG1-203ENST00000534663 IKZF4Q9H2S9 585 aa7.46□□□□□ -1.21
RAG1-203ENST00000534663 CXorf56Q9H5V9 222 aa7.46□□□□□ -1.21
RAG1-203ENST00000534663 OSGEPQ9NPF4 335 aa7.46□□□□□ -1.21
RAG1-203ENST00000534663 DNAJC17Q9NVM6 304 aaKnown RBP7.46□□□□□ -1.21
RAG1-203ENST00000534663 TMOD4Q9NZQ9 345 aa7.46□□□□□ -1.21
RAG1-203ENST00000534663 RNF14Q9UBS8 474 aa7.46□□□□□ -1.21
RAG1-203ENST00000534663 PNMA2Q9UL42 364 aa7.46□□□□□ -1.21
RAG1-203ENST00000534663 ADAMTS7Q9UKP4 1686 aa7.46□□□□□ -1.22
RAG1-203ENST00000534663 FAM107AO95990 144 aa7.46□□□□□ -1.22
RAG1-203ENST00000534663 CCDC172P0C7W6 258 aa7.46□□□□□ -1.22
RAG1-203ENST00000534663 UCHL3P15374 230 aa7.46□□□□□ -1.22
RAG1-203ENST00000534663 PDE6BP35913 854 aa7.46□□□□□ -1.22
RAG1-203ENST00000534663 GTF2IP78347 998 aa7.46□□□□□ -1.22
RAG1-203ENST00000534663 QPCTQ16769 361 aa7.46□□□□□ -1.22
RAG1-203ENST00000534663 OTUD6AQ7L8S5 288 aa7.46□□□□□ -1.22
RAG1-203ENST00000534663 SFR1Q86XK3 245 aa7.46□□□□□ -1.22
RAG1-203ENST00000534663 N4BP2L2Q92802 583 aaPredicted RBP7.46□□□□□ -1.22
RAG1-203ENST00000534663 CEP89Q96ST8 783 aa7.46□□□□□ -1.22
RAG1-203ENST00000534663 NEUROG2Q9H2A3 272 aa7.46□□□□□ -1.22
RAG1-203ENST00000534663 GDF3Q9NR23 364 aa7.46□□□□□ -1.22
RAG1-203ENST00000534663 AMFRQ9UKV5 643 aa7.46□□□□□ -1.22
RAG1-203ENST00000534663 TRPM3Q9HCF6 1732 aaPredicted RBP7.46□□□□□ -1.22
RAG1-203ENST00000534663 EIF4E1BA6NMX2 242 aaKnown RBP7.45□□□□□ -1.22
RAG1-203ENST00000534663 M0R2N6 131 aa7.45□□□□□ -1.22
RAG1-203ENST00000534663 PPP1R12BO60237 982 aaPredicted RBP7.45□□□□□ -1.22
RAG1-203ENST00000534663 NOL4O94818 638 aa7.45□□□□□ -1.22
RAG1-203ENST00000534663 AKR1B1P15121 316 aa7.45□□□□□ -1.22
RAG1-203ENST00000534663 CASP4P49662 377 aa7.45□□□□□ -1.22
RAG1-203ENST00000534663 CASP5P51878 434 aa7.45□□□□□ -1.22
RAG1-203ENST00000534663 SKOR1P84550 965 aa7.45□□□□□ -1.22
RAG1-203ENST00000534663 NAA25Q14CX7 972 aa7.45□□□□□ -1.22
RAG1-203ENST00000534663 SF3B3Q15393 1217 aaKnown RBP7.45□□□□□ -1.22
RAG1-203ENST00000534663 ZNF662Q6ZS27 426 aa7.45□□□□□ -1.22
RAG1-203ENST00000534663 PIGOQ8TEQ8 1089 aa7.45□□□□□ -1.22
RAG1-203ENST00000534663 CTNNBL1Q8WYA6 563 aaPredicted RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms