RNA–Protein interactions for RNA: ENST00000534143.5

CMTM1-220, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 781 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-220ENST00000534143 EPB42P16452 691 aa7.04□□□□□ -1.28
CMTM1-220ENST00000534143 HOXA7P31268 230 aaPredicted RBP7.04□□□□□ -1.28
CMTM1-220ENST00000534143 IDH3AP50213 366 aa7.04□□□□□ -1.28
CMTM1-220ENST00000534143 GUCY1B3Q02153 619 aa7.04□□□□□ -1.28
CMTM1-220ENST00000534143 RESTQ13127 1097 aa7.04□□□□□ -1.28
CMTM1-220ENST00000534143 HSP90AA2PQ14568 343 aaPredicted RBP7.04□□□□□ -1.28
CMTM1-220ENST00000534143 QRICH1Q2TAL8 776 aa7.04□□□□□ -1.28
CMTM1-220ENST00000534143 PLA2G4EQ3MJ16 856 aa7.04□□□□□ -1.28
CMTM1-220ENST00000534143 WWC2Q6AWC2 1192 aa7.04□□□□□ -1.28
CMTM1-220ENST00000534143 GPAT2Q6NUI2 795 aa7.04□□□□□ -1.28
CMTM1-220ENST00000534143 CATSPERGQ6ZRH7 1159 aa7.04□□□□□ -1.28
CMTM1-220ENST00000534143 CLEC17AQ6ZS10 378 aa7.04□□□□□ -1.28
CMTM1-220ENST00000534143 PRPF38AQ8NAV1 312 aaKnown RBP7.04□□□□□ -1.28
CMTM1-220ENST00000534143 PIBF1Q8WXW3 757 aa7.04□□□□□ -1.28
CMTM1-220ENST00000534143 WNK4Q96J92 1243 aa7.04□□□□□ -1.28
CMTM1-220ENST00000534143 PHF20Q9BVI0 1012 aa7.04□□□□□ -1.28
CMTM1-220ENST00000534143 RANBP17Q9H2T7 1088 aaKnown RBP7.04□□□□□ -1.28
CMTM1-220ENST00000534143 RPAP3Q9H6T3 665 aaPredicted RBP7.04□□□□□ -1.28
CMTM1-220ENST00000534143 BARHL2Q9NY43 387 aa7.04□□□□□ -1.28
CMTM1-220ENST00000534143 TMOD4Q9NZQ9 345 aa7.04□□□□□ -1.28
CMTM1-220ENST00000534143 VPS54Q9P1Q0 977 aa7.04□□□□□ -1.28
CMTM1-220ENST00000534143 ADAMTS5Q9UNA0 930 aa7.04□□□□□ -1.28
CMTM1-220ENST00000534143 KCNJ14Q9UNX9 436 aa7.04□□□□□ -1.28
CMTM1-220ENST00000534143 COL11A1P12107 1806 aaPredicted RBP7.04□□□□□ -1.28
CMTM1-220ENST00000534143 MYPNQ86TC9 1320 aa7.03□□□□□ -1.28
CMTM1-220ENST00000534143 MYH15Q9Y2K3 1946 aa7.03□□□□□ -1.28
CMTM1-220ENST00000534143 ESYT2A0FGR8 921 aa7.03□□□□□ -1.28
CMTM1-220ENST00000534143 VPS37CA5D8V6 355 aaPredicted RBP7.03□□□□□ -1.28
CMTM1-220ENST00000534143 H3BQV1 296 aa7.03□□□□□ -1.28
CMTM1-220ENST00000534143 hCG_1984214I3L0E3 225 aa7.03□□□□□ -1.28
CMTM1-220ENST00000534143 FOXN1O15353 648 aa7.03□□□□□ -1.28
CMTM1-220ENST00000534143 MMP1P03956 469 aa7.03□□□□□ -1.28
CMTM1-220ENST00000534143 ITGB2P05107 769 aa7.03□□□□□ -1.28
CMTM1-220ENST00000534143 U2AF2P26368 475 aaKnown RBP eCLIP7.03□□□□□ -1.28
CMTM1-220ENST00000534143 GRNP28799 593 aaKnown RBP7.03□□□□□ -1.28
CMTM1-220ENST00000534143 ADH7P40394 386 aa7.03□□□□□ -1.28
CMTM1-220ENST00000534143 SNAP25P60880 206 aa7.03□□□□□ -1.28
CMTM1-220ENST00000534143 KIF23Q02241 960 aaPredicted RBP7.03□□□□□ -1.28
CMTM1-220ENST00000534143 CCINQ13939 588 aa7.03□□□□□ -1.28
CMTM1-220ENST00000534143 COG2Q14746 738 aa7.03□□□□□ -1.28
CMTM1-220ENST00000534143 NFKBIBQ15653 356 aa7.03□□□□□ -1.28
CMTM1-220ENST00000534143 CDC37Q16543 378 aaPredicted RBP7.03□□□□□ -1.28
CMTM1-220ENST00000534143 SAPCD2Q86UD0 394 aa7.03□□□□□ -1.28
CMTM1-220ENST00000534143 HOMER1Q86YM7 354 aa7.03□□□□□ -1.28
CMTM1-220ENST00000534143 ZNF713Q8N859 430 aaPredicted RBP7.03□□□□□ -1.28
CMTM1-220ENST00000534143 DAGLBQ8NCG7 672 aa7.03□□□□□ -1.28
CMTM1-220ENST00000534143 FOXD4L4Q8WXT5 416 aaPredicted RBP7.03□□□□□ -1.28
CMTM1-220ENST00000534143 TNPO1Q92973 898 aaKnown RBP7.03□□□□□ -1.28
CMTM1-220ENST00000534143 COL26A1Q96A83 441 aa7.03□□□□□ -1.28
CMTM1-220ENST00000534143 COA7Q96BR5 231 aa7.03□□□□□ -1.28
CMTM1-220ENST00000534143 NAP1L5Q96NT1 182 aaPredicted RBP7.03□□□□□ -1.28
CMTM1-220ENST00000534143 SLF1Q9BQI6 1058 aa7.03□□□□□ -1.28
CMTM1-220ENST00000534143 ZMYND12Q9H0C1 365 aa7.03□□□□□ -1.28
CMTM1-220ENST00000534143 ZSCAN16Q9H4T2 348 aaPredicted RBP7.03□□□□□ -1.28
CMTM1-220ENST00000534143 C11orf16Q9NQ32 467 aa7.03□□□□□ -1.28
CMTM1-220ENST00000534143 NOP53Q9NZM5 478 aaKnown RBP7.03□□□□□ -1.28
CMTM1-220ENST00000534143 SEC63Q9UGP8 760 aaKnown RBP7.03□□□□□ -1.28
CMTM1-220ENST00000534143 PPP1R9AQ9ULJ8 1098 aa7.03□□□□□ -1.28
CMTM1-220ENST00000534143 ISY1Q9ULR0 285 aaKnown RBP7.03□□□□□ -1.28
CMTM1-220ENST00000534143 ZNF536O15090 1300 aa7.02□□□□□ -1.28
CMTM1-220ENST00000534143 KRBA1A5PL33 1030 aa7.02□□□□□ -1.29
CMTM1-220ENST00000534143 BTBD18B2RXH4 712 aa7.02□□□□□ -1.29
CMTM1-220ENST00000534143 KIF28PB7ZC32 967 aa7.02□□□□□ -1.29
CMTM1-220ENST00000534143 ADAMTS3O15072 1205 aa7.02□□□□□ -1.29
CMTM1-220ENST00000534143 FLOT1O75955 427 aa7.02□□□□□ -1.29
CMTM1-220ENST00000534143 ZBTB48P10074 688 aaPredicted RBP7.02□□□□□ -1.29
CMTM1-220ENST00000534143 XBP1P17861 261 aa7.02□□□□□ -1.29
CMTM1-220ENST00000534143 ARSDP51689 593 aa7.02□□□□□ -1.29
CMTM1-220ENST00000534143 HUNKP57058 714 aa7.02□□□□□ -1.29
CMTM1-220ENST00000534143 NLRP5P59047 1200 aa7.02□□□□□ -1.29
CMTM1-220ENST00000534143 IKQ13123 557 aaPredicted RBP7.02□□□□□ -1.29
CMTM1-220ENST00000534143 SNAPC2Q13487 334 aa7.02□□□□□ -1.29
CMTM1-220ENST00000534143 TRIM29Q14134 588 aa7.02□□□□□ -1.29
CMTM1-220ENST00000534143 COX20Q5RI15 118 aa7.02□□□□□ -1.29
CMTM1-220ENST00000534143 TREML2Q5T2D2 321 aa7.02□□□□□ -1.29
CMTM1-220ENST00000534143 GALNT17Q6IS24 598 aa7.02□□□□□ -1.29
CMTM1-220ENST00000534143 GADL1Q6ZQY3 521 aa7.02□□□□□ -1.29
CMTM1-220ENST00000534143 FASTKD5Q7L8L6 764 aaKnown RBP7.02□□□□□ -1.29
CMTM1-220ENST00000534143 HEATR3Q7Z4Q2 680 aa7.02□□□□□ -1.29
CMTM1-220ENST00000534143 FERMT3Q86UX7 667 aa7.02□□□□□ -1.29
CMTM1-220ENST00000534143 FBXO11Q86XK2 927 aa7.02□□□□□ -1.29
CMTM1-220ENST00000534143 RASAL3Q86YV0 1011 aa7.02□□□□□ -1.29
CMTM1-220ENST00000534143 DIS3L2Q8IYB7 885 aaKnown RBP7.02□□□□□ -1.29
CMTM1-220ENST00000534143 REPS2Q8NFH8 660 aa7.02□□□□□ -1.29
CMTM1-220ENST00000534143 CCDC148Q8NFR7 591 aa7.02□□□□□ -1.29
CMTM1-220ENST00000534143 CLP1Q92989 425 aaKnown RBP7.02□□□□□ -1.29
CMTM1-220ENST00000534143 IFT43Q96FT9 208 aa7.02□□□□□ -1.29
CMTM1-220ENST00000534143 AMNQ9BXJ7 453 aa7.02□□□□□ -1.29
CMTM1-220ENST00000534143 TANGO6Q9C0B7 1094 aa7.02□□□□□ -1.29
CMTM1-220ENST00000534143 FOXP1Q9H334 677 aaPredicted RBP7.02□□□□□ -1.29
CMTM1-220ENST00000534143 SLC38A10Q9HBR0 1119 aa7.02□□□□□ -1.29
CMTM1-220ENST00000534143 CXXC1Q9P0U4 656 aaPredicted RBP7.02□□□□□ -1.29
CMTM1-220ENST00000534143 PCDHA4Q9UN74 947 aa7.02□□□□□ -1.29
CMTM1-220ENST00000534143 AGTPBP1Q9UPW5 1226 aa7.02□□□□□ -1.29
CMTM1-220ENST00000534143 STARD13Q9Y3M8 1113 aa7.02□□□□□ -1.29
CMTM1-220ENST00000534143 A0A0G2JMZ2 1700 aa7.01□□□□□ -1.29
CMTM1-220ENST00000534143 SMCO2A6NFE2 343 aa7.01□□□□□ -1.29
CMTM1-220ENST00000534143 RASSF10A6NK89 507 aa7.01□□□□□ -1.29
CMTM1-220ENST00000534143 VWA5AO00534 786 aa7.01□□□□□ -1.29
CMTM1-220ENST00000534143 OPLAHO14841 1288 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms