RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 LRRC26Q2I0M4 334 aa3.84□□□□□ -1.79
CHMP4A-208ENST00000534106 CCDC152Q4G0S7 254 aa3.84□□□□□ -1.79
CHMP4A-208ENST00000534106 C9orf50Q5SZB4 431 aa3.84□□□□□ -1.79
CHMP4A-208ENST00000534106 PCNX4Q63HM2 1172 aa3.84□□□□□ -1.79
CHMP4A-208ENST00000534106 LETMD1Q6P1Q0 360 aa3.84□□□□□ -1.79
CHMP4A-208ENST00000534106 LRFN4Q6PJG9 635 aa3.84□□□□□ -1.79
CHMP4A-208ENST00000534106 CDH24Q86UP0 819 aa3.84□□□□□ -1.79
CHMP4A-208ENST00000534106 ZBTB38Q8NAP3 1195 aaPredicted RBP3.84□□□□□ -1.79
CHMP4A-208ENST00000534106 C3orf58Q8NDZ4 430 aa3.84□□□□□ -1.79
CHMP4A-208ENST00000534106 TTLL11Q8NHH1 800 aa3.84□□□□□ -1.79
CHMP4A-208ENST00000534106 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.84□□□□□ -1.79
CHMP4A-208ENST00000534106 RIN3Q8TB24 985 aa3.84□□□□□ -1.79
CHMP4A-208ENST00000534106 TRAIPQ9BWF2 469 aa3.84□□□□□ -1.79
CHMP4A-208ENST00000534106 SRCIN1Q9C0H9 1055 aa3.84□□□□□ -1.79
CHMP4A-208ENST00000534106 WNT10AQ9GZT5 417 aa3.84□□□□□ -1.79
CHMP4A-208ENST00000534106 FBRSQ9HAH7 460 aa3.84□□□□□ -1.79
CHMP4A-208ENST00000534106 C19orf73Q9NVV2 129 aa3.84□□□□□ -1.79
CHMP4A-208ENST00000534106 CACNA2D2Q9NY47 1150 aa3.84□□□□□ -1.79
CHMP4A-208ENST00000534106 PPM1HQ9ULR3 514 aa3.84□□□□□ -1.79
CHMP4A-208ENST00000534106 LAS1LQ9Y4W2 734 aaKnown RBP3.84□□□□□ -1.79
CHMP4A-208ENST00000534106 CAPN6Q9Y6Q1 641 aa3.84□□□□□ -1.79
CHMP4A-208ENST00000534106 ZNF804BA4D1E1 1349 aa3.84□□□□□ -1.79
CHMP4A-208ENST00000534106 NCANO14594 1321 aa3.84□□□□□ -1.79
CHMP4A-208ENST00000534106 SOWAHDA6NJG2 315 aa3.83□□□□□ -1.8
CHMP4A-208ENST00000534106 UNCXA6NJT0 531 aa3.83□□□□□ -1.8
CHMP4A-208ENST00000534106 PATL2C9JE40 543 aaKnown RBP3.83□□□□□ -1.8
CHMP4A-208ENST00000534106 ETV2O00321 342 aaPredicted RBP3.83□□□□□ -1.8
CHMP4A-208ENST00000534106 ELL2O00472 640 aaPredicted RBP3.83□□□□□ -1.8
CHMP4A-208ENST00000534106 PLIN1O60240 522 aa3.83□□□□□ -1.8
CHMP4A-208ENST00000534106 PEX10O60683 326 aa3.83□□□□□ -1.8
CHMP4A-208ENST00000534106 PCCAP05165 728 aaPredicted RBP3.83□□□□□ -1.8
CHMP4A-208ENST00000534106 CTSWP56202 376 aa3.83□□□□□ -1.8
CHMP4A-208ENST00000534106 RIPK4P57078 832 aa3.83□□□□□ -1.8
CHMP4A-208ENST00000534106 TRIM26Q12899 539 aaPredicted RBP3.83□□□□□ -1.8
CHMP4A-208ENST00000534106 SLBPQ14493 270 aaKnown RBP eCLIP3.83□□□□□ -1.8
CHMP4A-208ENST00000534106 ENOX2Q16206 610 aaKnown RBP3.83□□□□□ -1.8
CHMP4A-208ENST00000534106 RALGPS1Q5JS13 557 aa3.83□□□□□ -1.8
CHMP4A-208ENST00000534106 SCARA3Q6AZY7 606 aa3.83□□□□□ -1.8
CHMP4A-208ENST00000534106 FAM109BQ6ICB4 259 aaPredicted RBP3.83□□□□□ -1.8
CHMP4A-208ENST00000534106 C22orf34Q6ZV56 151 aa3.83□□□□□ -1.8
CHMP4A-208ENST00000534106 TTLL10Q6ZVT0 673 aa3.83□□□□□ -1.8
CHMP4A-208ENST00000534106 THAP5Q7Z6K1 395 aa3.83□□□□□ -1.8
CHMP4A-208ENST00000534106 ANKRD23Q86SG2 305 aa3.83□□□□□ -1.8
CHMP4A-208ENST00000534106 ERO1BQ86YB8 467 aa3.83□□□□□ -1.8
CHMP4A-208ENST00000534106 CREG2Q8IUH2 290 aa3.83□□□□□ -1.8
CHMP4A-208ENST00000534106 HID1Q8IV36 788 aa3.83□□□□□ -1.8
CHMP4A-208ENST00000534106 PLPPR2Q96GM1 343 aa3.83□□□□□ -1.8
CHMP4A-208ENST00000534106 CFAP53Q96M91 514 aa3.83□□□□□ -1.8
CHMP4A-208ENST00000534106 WRNIP1Q96S55 665 aa3.83□□□□□ -1.8
CHMP4A-208ENST00000534106 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.83□□□□□ -1.8
CHMP4A-208ENST00000534106 C11orf49Q9H6J7 331 aa3.83□□□□□ -1.8
CHMP4A-208ENST00000534106 SMG5Q9UPR3 1016 aaKnown RBP3.83□□□□□ -1.8
CHMP4A-208ENST00000534106 PPP2R3BQ9Y5P8 575 aa3.83□□□□□ -1.8
CHMP4A-208ENST00000534106 ST14Q9Y5Y6 855 aa3.83□□□□□ -1.8
CHMP4A-208ENST00000534106 MYO3BQ8WXR4 1341 aa3.83□□□□□ -1.8
CHMP4A-208ENST00000534106 ADGRA2Q96PE1 1338 aa3.83□□□□□ -1.8
CHMP4A-208ENST00000534106 SIPA1L3O60292 1781 aaPredicted RBP3.83□□□□□ -1.8
CHMP4A-208ENST00000534106 ZSWIM8A7E2V4 1837 aa3.83□□□□□ -1.8
CHMP4A-208ENST00000534106 NUP98P52948 1817 aa3.83□□□□□ -1.8
CHMP4A-208ENST00000534106 XIRP2A4UGR9 3374 aa3.83□□□□□ -1.8
CHMP4A-208ENST00000534106 PIEZO1Q92508 2521 aa3.82□□□□□ -1.8
CHMP4A-208ENST00000534106 MED23Q9ULK4 1368 aa3.82□□□□□ -1.8
CHMP4A-208ENST00000534106 PFASO15067 1338 aa3.82□□□□□ -1.8
CHMP4A-208ENST00000534106 DNAJC25-GNG10A0A024R161 153 aa3.82□□□□□ -1.8
CHMP4A-208ENST00000534106 CHL1O00533 1208 aa3.82□□□□□ -1.8
CHMP4A-208ENST00000534106 MYO1BO43795 1136 aa3.82□□□□□ -1.8
CHMP4A-208ENST00000534106 WDHD1O75717 1129 aaPredicted RBP3.82□□□□□ -1.8
CHMP4A-208ENST00000534106 KRT1P04264 644 aa3.82□□□□□ -1.8
CHMP4A-208ENST00000534106 IGKV5-2P06315 115 aa3.82□□□□□ -1.8
CHMP4A-208ENST00000534106 CELA3AP09093 270 aa3.82□□□□□ -1.8
CHMP4A-208ENST00000534106 BUD31P41223 144 aaPredicted RBP3.82□□□□□ -1.8
CHMP4A-208ENST00000534106 KIR3DL1P43629 444 aa3.82□□□□□ -1.8
CHMP4A-208ENST00000534106 ERVFC1P60507 584 aa3.82□□□□□ -1.8
CHMP4A-208ENST00000534106 ATP2B2Q01814 1243 aa3.82□□□□□ -1.8
CHMP4A-208ENST00000534106 CHRNDQ07001 517 aa3.82□□□□□ -1.8
CHMP4A-208ENST00000534106 TNK2Q07912 1038 aa3.82□□□□□ -1.8
CHMP4A-208ENST00000534106 PPIL2Q13356 520 aa3.82□□□□□ -1.8
CHMP4A-208ENST00000534106 NKG7Q16617 165 aa3.82□□□□□ -1.8
CHMP4A-208ENST00000534106 WIPI1Q5MNZ9 446 aaPredicted RBP3.82□□□□□ -1.8
CHMP4A-208ENST00000534106 RASIP1Q5U651 963 aa3.82□□□□□ -1.8
CHMP4A-208ENST00000534106 PRAMEF13Q5VWM6 474 aa3.82□□□□□ -1.8
CHMP4A-208ENST00000534106 CCDC84Q86UT8 332 aaPredicted RBP3.82□□□□□ -1.8
CHMP4A-208ENST00000534106 COX4I2Q96KJ9 171 aa3.82□□□□□ -1.8
CHMP4A-208ENST00000534106 KRTAP4-11Q9BYQ6 195 aa3.82□□□□□ -1.8
CHMP4A-208ENST00000534106 IRF2BPLQ9H1B7 796 aa3.82□□□□□ -1.8
CHMP4A-208ENST00000534106 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.82□□□□□ -1.8
CHMP4A-208ENST00000534106 TMEM59LQ9UK28 342 aa3.82□□□□□ -1.8
CHMP4A-208ENST00000534106 TTF2Q9UNY4 1162 aaKnown RBP3.82□□□□□ -1.8
CHMP4A-208ENST00000534106 TNPO2O14787 897 aaKnown RBP3.81□□□□□ -1.8
CHMP4A-208ENST00000534106 GIPC1O14908 333 aa3.81□□□□□ -1.8
CHMP4A-208ENST00000534106 IL1R1P14778 569 aa3.81□□□□□ -1.8
CHMP4A-208ENST00000534106 FOSL2P15408 326 aa3.81□□□□□ -1.8
CHMP4A-208ENST00000534106 GLDCP23378 1020 aa3.81□□□□□ -1.8
CHMP4A-208ENST00000534106 TPP2P29144 1249 aaPredicted RBP3.81□□□□□ -1.8
CHMP4A-208ENST00000534106 CRKP46108 304 aa3.81□□□□□ -1.8
CHMP4A-208ENST00000534106 GYG1P46976 350 aa3.81□□□□□ -1.8
CHMP4A-208ENST00000534106 KCNJ4P48050 445 aa3.81□□□□□ -1.8
CHMP4A-208ENST00000534106 LINC00310P59036 64 aa3.81□□□□□ -1.8
CHMP4A-208ENST00000534106 PTPN11Q06124 597 aaPredicted RBP3.81□□□□□ -1.8
CHMP4A-208ENST00000534106 PPATQ06203 517 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms