RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 MLLT6P55198 1093 aaPredicted RBP5.81□□□□□ -1.48
ITGB1-219ENST00000534049 SKIDA1Q1XH10 827 aa5.81□□□□□ -1.48
ITGB1-219ENST00000534049 TRIM61Q5EBN2 209 aa5.81□□□□□ -1.48
ITGB1-219ENST00000534049 FOXB2Q5VYV0 432 aa5.81□□□□□ -1.48
ITGB1-219ENST00000534049 DPP8Q6V1X1 898 aaPredicted RBP5.81□□□□□ -1.48
ITGB1-219ENST00000534049 ARHGAP36Q6ZRI8 547 aa5.81□□□□□ -1.48
ITGB1-219ENST00000534049 ZC3H7AQ8IWR0 971 aaKnown RBP5.81□□□□□ -1.48
ITGB1-219ENST00000534049 REXO1L1PQ8IX06 675 aa5.81□□□□□ -1.48
ITGB1-219ENST00000534049 PCDH19Q8TAB3 1148 aa5.81□□□□□ -1.48
ITGB1-219ENST00000534049 ZCCHC14Q8WYQ9 949 aaKnown RBP5.81□□□□□ -1.48
ITGB1-219ENST00000534049 MRPL4Q9BYD3 311 aaKnown RBP5.81□□□□□ -1.48
ITGB1-219ENST00000534049 PCGF6Q9BYE7 350 aa5.81□□□□□ -1.48
ITGB1-219ENST00000534049 INVSQ9Y283 1065 aa5.81□□□□□ -1.48
ITGB1-219ENST00000534049 PCDHA8Q9Y5H6 950 aa5.81□□□□□ -1.48
ITGB1-219ENST00000534049 ATP23Q9Y6H3 246 aa5.81□□□□□ -1.48
ITGB1-219ENST00000534049 FAM221BA6H8Z2 402 aa5.8□□□□□ -1.48
ITGB1-219ENST00000534049 NPTXRO95502 500 aa5.8□□□□□ -1.48
ITGB1-219ENST00000534049 CKMP06732 381 aa5.8□□□□□ -1.48
ITGB1-219ENST00000534049 GLB1LQ6UWU2 654 aa5.8□□□□□ -1.48
ITGB1-219ENST00000534049 GSTCDQ8NEC7 633 aa5.8□□□□□ -1.48
ITGB1-219ENST00000534049 MAGEB10Q96LZ2 347 aaPredicted RBP5.8□□□□□ -1.48
ITGB1-219ENST00000534049 SAMD11Q96NU1 681 aa5.8□□□□□ -1.48
ITGB1-219ENST00000534049 DNAJC7Q99615 494 aa5.8□□□□□ -1.48
ITGB1-219ENST00000534049 OSBPL2Q9H1P3 480 aa5.8□□□□□ -1.48
ITGB1-219ENST00000534049 SFMBT1Q9UHJ3 866 aa5.8□□□□□ -1.48
ITGB1-219ENST00000534049 ZFP69BQ9UJL9 534 aa5.8□□□□□ -1.48
ITGB1-219ENST00000534049 ZNF536O15090 1300 aa5.79□□□□□ -1.48
ITGB1-219ENST00000534049 KCNQ2O43526 872 aa5.79□□□□□ -1.48
ITGB1-219ENST00000534049 CUTAO60888 179 aa5.79□□□□□ -1.48
ITGB1-219ENST00000534049 CRTAMO95727 393 aa5.79□□□□□ -1.48
ITGB1-219ENST00000534049 LTFP02788 710 aa5.79□□□□□ -1.48
ITGB1-219ENST00000534049 PDE6AP16499 860 aa5.79□□□□□ -1.48
ITGB1-219ENST00000534049 PTPN1P18031 435 aaKnown RBP5.79□□□□□ -1.48
ITGB1-219ENST00000534049 HERVK_113P62684 666 aa5.79□□□□□ -1.48
ITGB1-219ENST00000534049 LACTBP83111 547 aaPredicted RBP5.79□□□□□ -1.48
ITGB1-219ENST00000534049 PFKPQ01813 784 aa5.79□□□□□ -1.48
ITGB1-219ENST00000534049 DBPQ10586 325 aaPredicted RBP5.79□□□□□ -1.48
ITGB1-219ENST00000534049 NFATC3Q12968 1075 aa5.79□□□□□ -1.48
ITGB1-219ENST00000534049 TBC1D10BQ4KMP7 808 aaPredicted RBP5.79□□□□□ -1.48
ITGB1-219ENST00000534049 C2orf27AQ580R0 203 aa5.79□□□□□ -1.48
ITGB1-219ENST00000534049 TAF7LQ5H9L4 462 aa5.79□□□□□ -1.48
ITGB1-219ENST00000534049 BTBD8Q5XKL5 378 aa5.79□□□□□ -1.48
ITGB1-219ENST00000534049 PMFBP1Q8TBY8 1022 aa5.79□□□□□ -1.48
ITGB1-219ENST00000534049 MBD6Q96DN6 1003 aa5.79□□□□□ -1.48
ITGB1-219ENST00000534049 CELF4Q9BZC1 486 aaKnown RBP5.79□□□□□ -1.48
ITGB1-219ENST00000534049 CD244Q9BZW8 370 aa5.79□□□□□ -1.48
ITGB1-219ENST00000534049 KCND1Q9NSA2 647 aa5.79□□□□□ -1.48
ITGB1-219ENST00000534049 RIC8BQ9NVN3 520 aa5.79□□□□□ -1.48
ITGB1-219ENST00000534049 ARHGAP28Q9P2N2 729 aa5.79□□□□□ -1.48
ITGB1-219ENST00000534049 NDOR1Q9UHB4 597 aa5.79□□□□□ -1.48
ITGB1-219ENST00000534049 ADAM29Q9UKF5 820 aa5.79□□□□□ -1.48
ITGB1-219ENST00000534049 WASF3Q9UPY6 502 aa5.79□□□□□ -1.48
ITGB1-219ENST00000534049 TELO2Q9Y4R8 837 aa5.79□□□□□ -1.48
ITGB1-219ENST00000534049 EIF4G3O43432 1585 aaKnown RBP5.79□□□□□ -1.48
ITGB1-219ENST00000534049 TOPBP1Q92547 1522 aa5.79□□□□□ -1.48
ITGB1-219ENST00000534049 ZNF608Q9ULD9 1512 aaPredicted RBP5.79□□□□□ -1.48
ITGB1-219ENST00000534049 CCDC66A2RUB6 948 aa5.78□□□□□ -1.48
ITGB1-219ENST00000534049 H0Y858 1186 aa5.78□□□□□ -1.48
ITGB1-219ENST00000534049 CLASP2O75122 1294 aaKnown RBP5.78□□□□□ -1.48
ITGB1-219ENST00000534049 KNG1P01042 644 aa5.78□□□□□ -1.48
ITGB1-219ENST00000534049 COL6A1P12109 1028 aa5.78□□□□□ -1.48
ITGB1-219ENST00000534049 DNMBPQ6XZF7 1577 aa5.78□□□□□ -1.48
ITGB1-219ENST00000534049 ARHGEF18Q6ZSZ5 1173 aa5.78□□□□□ -1.48
ITGB1-219ENST00000534049 Q6ZUG5 572 aa5.78□□□□□ -1.48
ITGB1-219ENST00000534049 RBM12BQ8IXT5 1001 aaKnown RBP5.78□□□□□ -1.48
ITGB1-219ENST00000534049 KBTBD2Q8IY47 623 aa5.78□□□□□ -1.48
ITGB1-219ENST00000534049 IFNL2Q8IZJ0 200 aa5.78□□□□□ -1.48
ITGB1-219ENST00000534049 SH3RF2Q8TEC5 729 aa5.78□□□□□ -1.48
ITGB1-219ENST00000534049 RBM15Q96T37 977 aaKnown RBP eCLIP5.78□□□□□ -1.48
ITGB1-219ENST00000534049 SMPD4Q9NXE4 827 aa5.78□□□□□ -1.48
ITGB1-219ENST00000534049 FBXO10Q9UK96 956 aa5.78□□□□□ -1.48
ITGB1-219ENST00000534049 PCDHA9Q9Y5H5 950 aa5.78□□□□□ -1.48
ITGB1-219ENST00000534049 IFT140Q96RY7 1462 aa5.77□□□□□ -1.49
ITGB1-219ENST00000534049 TCRBV5S4A2TA0A5A2 114 aa5.77□□□□□ -1.49
ITGB1-219ENST00000534049 ZNF561-AS1K7EIQ3 104 aa5.77□□□□□ -1.49
ITGB1-219ENST00000534049 ACOT7O00154 380 aa5.77□□□□□ -1.49
ITGB1-219ENST00000534049 MAN2B1O00754 1011 aa5.77□□□□□ -1.49
ITGB1-219ENST00000534049 B4GALT3O60512 393 aa5.77□□□□□ -1.49
ITGB1-219ENST00000534049 KLHL18O94889 574 aa5.77□□□□□ -1.49
ITGB1-219ENST00000534049 SRGAP2CP0DJJ0 459 aa5.77□□□□□ -1.49
ITGB1-219ENST00000534049 PYGMP11217 842 aa5.77□□□□□ -1.49
ITGB1-219ENST00000534049 MAGEA10P43363 369 aaPredicted RBP5.77□□□□□ -1.49
ITGB1-219ENST00000534049 EPHB4P54760 987 aa5.77□□□□□ -1.49
ITGB1-219ENST00000534049 PPP2CBP62714 309 aa5.77□□□□□ -1.49
ITGB1-219ENST00000534049 PPP2CAP67775 309 aa5.77□□□□□ -1.49
ITGB1-219ENST00000534049 ZNF568Q3ZCX4 644 aa5.77□□□□□ -1.49
ITGB1-219ENST00000534049 HHIPL2Q6UWX4 724 aa5.77□□□□□ -1.49
ITGB1-219ENST00000534049 CXXC5Q7LFL8 322 aaKnown RBP5.77□□□□□ -1.49
ITGB1-219ENST00000534049 RALYLQ86SE5 291 aaKnown RBP5.77□□□□□ -1.49
ITGB1-219ENST00000534049 AJUBAQ96IF1 538 aa5.77□□□□□ -1.49
ITGB1-219ENST00000534049 SLC52A2Q9HAB3 445 aa5.77□□□□□ -1.49
ITGB1-219ENST00000534049 RBPJLQ9UBG7 517 aa5.77□□□□□ -1.49
ITGB1-219ENST00000534049 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.76□□□□□ -1.49
ITGB1-219ENST00000534049 B4E1Z4 1266 aa5.76□□□□□ -1.49
ITGB1-219ENST00000534049 AMY2AP04746 511 aa5.76□□□□□ -1.49
ITGB1-219ENST00000534049 KRT15P19012 456 aa5.76□□□□□ -1.49
ITGB1-219ENST00000534049 AMY2BP19961 511 aa5.76□□□□□ -1.49
ITGB1-219ENST00000534049 DNM2P50570 870 aa5.76□□□□□ -1.49
ITGB1-219ENST00000534049 SLFN13Q68D06 897 aa5.76□□□□□ -1.49
ITGB1-219ENST00000534049 OSTM1Q86WC4 334 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms