RNA–Protein interactions for RNA: ENST00000533730.5

CASP4-212, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 1,214 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-212ENST00000533730 ESYT3A0FGR9 886 aa8.99□□□□□ -0.97
CASP4-212ENST00000533730 TRIM75PA6NK02 468 aa8.99□□□□□ -0.97
CASP4-212ENST00000533730 SGSM2O43147 1006 aa8.99□□□□□ -0.97
CASP4-212ENST00000533730 MMP20O60882 483 aa8.99□□□□□ -0.97
CASP4-212ENST00000533730 TRPA1O75762 1119 aa8.99□□□□□ -0.97
CASP4-212ENST00000533730 ACPPP15309 386 aa8.99□□□□□ -0.97
CASP4-212ENST00000533730 TFE3P19532 575 aaPredicted RBP8.99□□□□□ -0.97
CASP4-212ENST00000533730 USP14P54578 494 aa8.99□□□□□ -0.97
CASP4-212ENST00000533730 BACE1P56817 501 aa8.99□□□□□ -0.97
CASP4-212ENST00000533730 PABPC4Q13310 644 aaKnown RBP eCLIP8.99□□□□□ -0.97
CASP4-212ENST00000533730 RAB3GAP1Q15042 981 aa8.99□□□□□ -0.97
CASP4-212ENST00000533730 KIAA1211Q6ZU35 1233 aa8.99□□□□□ -0.97
CASP4-212ENST00000533730 CCNJLQ8IV13 435 aa8.99□□□□□ -0.97
CASP4-212ENST00000533730 ZNF444Q8N0Y2 327 aaPredicted RBP8.99□□□□□ -0.97
CASP4-212ENST00000533730 SLC44A5Q8NCS7 719 aa8.99□□□□□ -0.97
CASP4-212ENST00000533730 PNMA5Q96PV4 448 aa8.99□□□□□ -0.97
CASP4-212ENST00000533730 FEZ1Q99689 392 aa8.99□□□□□ -0.97
CASP4-212ENST00000533730 ZKSCAN3Q9BRR0 538 aa8.99□□□□□ -0.97
CASP4-212ENST00000533730 RNF41Q9H4P4 317 aaPredicted RBP8.99□□□□□ -0.97
CASP4-212ENST00000533730 TMOD4Q9NZQ9 345 aa8.99□□□□□ -0.97
CASP4-212ENST00000533730 SLC45A1Q9Y2W3 748 aa8.99□□□□□ -0.97
CASP4-212ENST00000533730 MYH8P13535 1937 aa8.98□□□□□ -0.97
CASP4-212ENST00000533730 ELOA3CA0A087WX78 387 aaPredicted RBP8.98□□□□□ -0.97
CASP4-212ENST00000533730 ELOA3DA6NLF2 546 aaPredicted RBP8.98□□□□□ -0.97
CASP4-212ENST00000533730 IGF2BP3O00425 579 aaKnown RBP eCLIP8.98□□□□□ -0.97
CASP4-212ENST00000533730 ZNF213O14771 459 aa8.98□□□□□ -0.97
CASP4-212ENST00000533730 PPP1R12AO14974 1030 aaPredicted RBP8.98□□□□□ -0.97
CASP4-212ENST00000533730 FOXN1O15353 648 aa8.98□□□□□ -0.97
CASP4-212ENST00000533730 ORC4O43929 436 aa8.98□□□□□ -0.97
CASP4-212ENST00000533730 HOXB4P17483 251 aaPredicted RBP8.98□□□□□ -0.97
CASP4-212ENST00000533730 JAG1P78504 1218 aa8.98□□□□□ -0.97
CASP4-212ENST00000533730 IMMTQ16891 758 aaKnown RBP8.98□□□□□ -0.97
CASP4-212ENST00000533730 ELOA3BQ3SY89 546 aa8.98□□□□□ -0.97
CASP4-212ENST00000533730 SEZ6Q53EL9 994 aa8.98□□□□□ -0.97
CASP4-212ENST00000533730 TTBK2Q6IQ55 1244 aa8.98□□□□□ -0.97
CASP4-212ENST00000533730 GADL1Q6ZQY3 521 aa8.98□□□□□ -0.97
CASP4-212ENST00000533730 SLITRK4Q8IW52 837 aa8.98□□□□□ -0.97
CASP4-212ENST00000533730 RPUSD2Q8IZ73 545 aaKnown RBP8.98□□□□□ -0.97
CASP4-212ENST00000533730 ELOA3Q8NG57 546 aa8.98□□□□□ -0.97
CASP4-212ENST00000533730 FBXO27Q8NI29 283 aa8.98□□□□□ -0.97
CASP4-212ENST00000533730 CEP44Q9C0F1 390 aa8.98□□□□□ -0.97
CASP4-212ENST00000533730 KIAA1683Q9H0B3 1180 aa8.98□□□□□ -0.97
CASP4-212ENST00000533730 CCDC113Q9H0I3 377 aa8.98□□□□□ -0.97
CASP4-212ENST00000533730 SLKQ9H2G2 1235 aaPredicted RBP8.98□□□□□ -0.97
CASP4-212ENST00000533730 ST7Q9NRC1 585 aa8.98□□□□□ -0.97
CASP4-212ENST00000533730 AGTPBP1Q9UPW5 1226 aa8.98□□□□□ -0.97
CASP4-212ENST00000533730 PRKAB1Q9Y478 270 aa8.98□□□□□ -0.97
CASP4-212ENST00000533730 PLIN4Q96Q06 1357 aa8.98□□□□□ -0.97
CASP4-212ENST00000533730 PHIPQ8WWQ0 1821 aa8.97□□□□□ -0.97
CASP4-212ENST00000533730 ZBTB42B2RXF5 422 aa8.97□□□□□ -0.97
CASP4-212ENST00000533730 BTBD19C9JJ37 291 aa8.97□□□□□ -0.97
CASP4-212ENST00000533730 PDHXO00330 501 aa8.97□□□□□ -0.97
CASP4-212ENST00000533730 TLR3O15455 904 aaKnown RBP8.97□□□□□ -0.97
CASP4-212ENST00000533730 TSPY3P0CV98 308 aa8.97□□□□□ -0.97
CASP4-212ENST00000533730 TSPY8P0CW00 308 aa8.97□□□□□ -0.97
CASP4-212ENST00000533730 RARAP10276 462 aa8.97□□□□□ -0.97
CASP4-212ENST00000533730 HSPA8P11142 646 aaKnown RBP8.97□□□□□ -0.97
CASP4-212ENST00000533730 AKR1B1P15121 316 aa8.97□□□□□ -0.97
CASP4-212ENST00000533730 GRIA4P48058 902 aa8.97□□□□□ -0.97
CASP4-212ENST00000533730 HMGCS2P54868 508 aa8.97□□□□□ -0.97
CASP4-212ENST00000533730 ICA1Q05084 483 aa8.97□□□□□ -0.97
CASP4-212ENST00000533730 MOGSQ13724 837 aa8.97□□□□□ -0.97
CASP4-212ENST00000533730 SEPT2Q15019 361 aa8.97□□□□□ -0.97
CASP4-212ENST00000533730 AKNAD1Q5T1N1 836 aa8.97□□□□□ -0.97
CASP4-212ENST00000533730 AGMOQ6ZNB7 445 aa8.97□□□□□ -0.97
CASP4-212ENST00000533730 MFSD6Q6ZSS7 791 aa8.97□□□□□ -0.97
CASP4-212ENST00000533730 DHX32Q7L7V1 743 aaKnown RBP8.97□□□□□ -0.97
CASP4-212ENST00000533730 CCDC84Q86UT8 332 aaPredicted RBP8.97□□□□□ -0.97
CASP4-212ENST00000533730 SKAP1Q86WV1 359 aa8.97□□□□□ -0.97
CASP4-212ENST00000533730 FAM43AQ8N2R8 423 aa8.97□□□□□ -0.97
CASP4-212ENST00000533730 STAG1Q8WVM7 1258 aa8.97□□□□□ -0.97
CASP4-212ENST00000533730 BTBD6Q96KE9 485 aa8.97□□□□□ -0.97
CASP4-212ENST00000533730 C12orf42Q96LP6 360 aa8.97□□□□□ -0.97
CASP4-212ENST00000533730 PARK7Q99497 189 aaKnown RBP8.97□□□□□ -0.97
CASP4-212ENST00000533730 OSMRQ99650 979 aa8.97□□□□□ -0.97
CASP4-212ENST00000533730 PTPN18Q99952 460 aa8.97□□□□□ -0.97
CASP4-212ENST00000533730 PRDM10Q9NQV6 1147 aa8.97□□□□□ -0.97
CASP4-212ENST00000533730 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.97□□□□□ -0.97
CASP4-212ENST00000533730 SYNPO2Q9UMS6 1093 aa8.97□□□□□ -0.97
CASP4-212ENST00000533730 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.97□□□□□ -0.97
CASP4-212ENST00000533730 TSPY2A6NKD2 308 aa8.96□□□□□ -0.98
CASP4-212ENST00000533730 SMIM22K7EJ46 135 aa8.96□□□□□ -0.98
CASP4-212ENST00000533730 ENC1O14682 589 aa8.96□□□□□ -0.98
CASP4-212ENST00000533730 PAGE1O75459 146 aa8.96□□□□□ -0.98
CASP4-212ENST00000533730 PARNO95453 639 aaKnown RBP8.96□□□□□ -0.98
CASP4-212ENST00000533730 HOXD8P13378 290 aaPredicted RBP8.96□□□□□ -0.98
CASP4-212ENST00000533730 GUCY1A2P33402 732 aa8.96□□□□□ -0.98
CASP4-212ENST00000533730 CRHR2Q13324 411 aa8.96□□□□□ -0.98
CASP4-212ENST00000533730 DDR2Q16832 855 aa8.96□□□□□ -0.98
CASP4-212ENST00000533730 SHROOM1Q2M3G4 852 aaPredicted RBP8.96□□□□□ -0.98
CASP4-212ENST00000533730 COL13A1Q5TAT6 717 aaPredicted RBP8.96□□□□□ -0.98
CASP4-212ENST00000533730 GPAT2Q6NUI2 795 aa8.96□□□□□ -0.98
CASP4-212ENST00000533730 NCAPG2Q86XI2 1143 aa8.96□□□□□ -0.98
CASP4-212ENST00000533730 STK11IPQ8N1F8 1099 aa8.96□□□□□ -0.98
CASP4-212ENST00000533730 NEDD1Q8NHV4 660 aa8.96□□□□□ -0.98
CASP4-212ENST00000533730 LPAR1Q92633 364 aa8.96□□□□□ -0.98
CASP4-212ENST00000533730 NECAB3Q96P71 396 aaPredicted RBP8.96□□□□□ -0.98
CASP4-212ENST00000533730 CNNM2Q9H8M5 875 aa8.96□□□□□ -0.98
CASP4-212ENST00000533730 ENAMQ9NRM1 1142 aa8.96□□□□□ -0.98
CASP4-212ENST00000533730 TOMM22Q9NS69 142 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms