RNA–Protein interactions for RNA: ENST00000533682.1

CLP1-205, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLP1, Length 2,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-205ENST00000533682 TRIM14Q14142 442 aa13.21□□□□□ -0.29
CLP1-205ENST00000533682 KSR1Q8IVT5 923 aa13.21□□□□□ -0.29
CLP1-205ENST00000533682 TSG101Q99816 390 aa13.21□□□□□ -0.29
CLP1-205ENST00000533682 MMRN2Q9H8L6 949 aa13.21□□□□□ -0.29
CLP1-205ENST00000533682 SIK3Q9Y2K2 1263 aa13.21□□□□□ -0.29
CLP1-205ENST00000533682 PITPNM2Q9BZ72 1349 aa13.21□□□□□ -0.29
CLP1-205ENST00000533682 COL11A1P12107 1806 aaPredicted RBP13.21□□□□□ -0.29
CLP1-205ENST00000533682 VWA5AO00534 786 aa13.21□□□□□ -0.3
CLP1-205ENST00000533682 EYA4O95677 639 aa13.21□□□□□ -0.3
CLP1-205ENST00000533682 PLEKP08567 350 aaPredicted RBP13.21□□□□□ -0.3
CLP1-205ENST00000533682 NSMFQ6X4W1 530 aa13.21□□□□□ -0.3
CLP1-205ENST00000533682 SCYL3Q8IZE3 742 aa13.21□□□□□ -0.3
CLP1-205ENST00000533682 ZNF280CQ8ND82 737 aa13.21□□□□□ -0.3
CLP1-205ENST00000533682 TRERF1Q96PN7 1200 aa13.21□□□□□ -0.3
CLP1-205ENST00000533682 ERGIC2Q96RQ1 377 aa13.21□□□□□ -0.3
CLP1-205ENST00000533682 CRACR2AQ9BSW2 395 aa13.21□□□□□ -0.3
CLP1-205ENST00000533682 EPN1Q9Y6I3 576 aaPredicted RBP13.21□□□□□ -0.3
CLP1-205ENST00000533682 PHLPP2Q6ZVD8 1323 aa13.2□□□□□ -0.3
CLP1-205ENST00000533682 DDNO94850 711 aaPredicted RBP13.2□□□□□ -0.3
CLP1-205ENST00000533682 MYCLP12524 364 aaPredicted RBP13.2□□□□□ -0.3
CLP1-205ENST00000533682 ITGB3BPQ13352 177 aaPredicted RBP13.2□□□□□ -0.3
CLP1-205ENST00000533682 ADAM9Q13443 819 aa13.2□□□□□ -0.3
CLP1-205ENST00000533682 MAN2A1Q16706 1144 aa13.2□□□□□ -0.3
CLP1-205ENST00000533682 ZC2HC1CQ53FD0 456 aaPredicted RBP13.2□□□□□ -0.3
CLP1-205ENST00000533682 FKBP15Q5T1M5 1219 aa13.2□□□□□ -0.3
CLP1-205ENST00000533682 COL4A3BPQ9Y5P4 624 aa13.2□□□□□ -0.3
CLP1-205ENST00000533682 DHX15O43143 795 aaKnown RBP13.2□□□□□ -0.3
CLP1-205ENST00000533682 NDUFA10O95299 355 aa13.2□□□□□ -0.3
CLP1-205ENST00000533682 SLU7O95391 586 aaKnown RBP13.2□□□□□ -0.3
CLP1-205ENST00000533682 TFRCP02786 760 aaKnown RBP13.2□□□□□ -0.3
CLP1-205ENST00000533682 NMT1P30419 496 aaKnown RBP13.2□□□□□ -0.3
CLP1-205ENST00000533682 KCNMA1Q12791 1236 aa13.2□□□□□ -0.3
CLP1-205ENST00000533682 CCDC40Q4G0X9 1142 aa13.2□□□□□ -0.3
CLP1-205ENST00000533682 B3GNT9Q6UX72 402 aa13.2□□□□□ -0.3
CLP1-205ENST00000533682 C1orf186Q6ZWK4 172 aa13.2□□□□□ -0.3
CLP1-205ENST00000533682 MAEAQ7L5Y9 396 aa13.2□□□□□ -0.3
CLP1-205ENST00000533682 PLCD3Q8N3E9 789 aa13.2□□□□□ -0.3
CLP1-205ENST00000533682 ANKRD7Q92527 254 aa13.2□□□□□ -0.3
CLP1-205ENST00000533682 LXNQ9BS40 222 aa13.2□□□□□ -0.3
CLP1-205ENST00000533682 PICK1Q9NRD5 415 aa13.2□□□□□ -0.3
CLP1-205ENST00000533682 ZNF112Q9UJU3 913 aa13.2□□□□□ -0.3
CLP1-205ENST00000533682 TMEM150BA6NC51 233 aa13.19□□□□□ -0.3
CLP1-205ENST00000533682 ATP9AO75110 1047 aa13.19□□□□□ -0.3
CLP1-205ENST00000533682 CASQ1P31415 396 aa13.19□□□□□ -0.3
CLP1-205ENST00000533682 ARHGAP25P42331 645 aa13.19□□□□□ -0.3
CLP1-205ENST00000533682 TKFCQ3LXA3 575 aa13.19□□□□□ -0.3
CLP1-205ENST00000533682 RLFQ13129 1914 aa13.19□□□□□ -0.3
CLP1-205ENST00000533682 PARP14Q460N5 1801 aa13.19□□□□□ -0.3
CLP1-205ENST00000533682 MYH11P35749 1972 aa13.19□□□□□ -0.3
CLP1-205ENST00000533682 RPTORQ8N122 1335 aa13.19□□□□□ -0.3
CLP1-205ENST00000533682 DOCK1Q14185 1865 aa13.19□□□□□ -0.3
CLP1-205ENST00000533682 CLIC2O15247 247 aa13.19□□□□□ -0.3
CLP1-205ENST00000533682 GCNT3O95395 438 aa13.19□□□□□ -0.3
CLP1-205ENST00000533682 NR2F2P24468 414 aa13.19□□□□□ -0.3
CLP1-205ENST00000533682 CYP27A1Q02318 531 aa13.19□□□□□ -0.3
CLP1-205ENST00000533682 ELF2Q15723 593 aa13.19□□□□□ -0.3
CLP1-205ENST00000533682 ERCC6LQ2NKX8 1250 aa13.19□□□□□ -0.3
CLP1-205ENST00000533682 DCAF15Q66K64 600 aa13.19□□□□□ -0.3
CLP1-205ENST00000533682 EPM2AIP1Q7L775 607 aaPredicted RBP13.19□□□□□ -0.3
CLP1-205ENST00000533682 CNKSR2Q8WXI2 1034 aa13.19□□□□□ -0.3
CLP1-205ENST00000533682 UPF1Q92900 1129 aaKnown RBP eCLIP13.19□□□□□ -0.3
CLP1-205ENST00000533682 KLRG1Q96E93 195 aa13.19□□□□□ -0.3
CLP1-205ENST00000533682 TEKT3Q9BXF9 490 aa13.19□□□□□ -0.3
CLP1-205ENST00000533682 EHMT1Q9H9B1 1298 aa13.19□□□□□ -0.3
CLP1-205ENST00000533682 TUFT1Q9NNX1 390 aa13.19□□□□□ -0.3
CLP1-205ENST00000533682 OGFRQ9NZT2 677 aa13.19□□□□□ -0.3
CLP1-205ENST00000533682 CTDP1Q9Y5B0 961 aaPredicted RBP13.19□□□□□ -0.3
CLP1-205ENST00000533682 SSC5DA1L4H1 1573 aa13.18□□□□□ -0.3
CLP1-205ENST00000533682 GOLGA6L9A6NEM1 432 aa13.18□□□□□ -0.3
CLP1-205ENST00000533682 SLC26A4O43511 780 aa13.18□□□□□ -0.3
CLP1-205ENST00000533682 FGFR1OPO95684 399 aaKnown RBP13.18□□□□□ -0.3
CLP1-205ENST00000533682 IRX5P78411 483 aaPredicted RBP13.18□□□□□ -0.3
CLP1-205ENST00000533682 ZBED6P86452 979 aa13.18□□□□□ -0.3
CLP1-205ENST00000533682 GABPB1Q06547 395 aaPredicted RBP13.18□□□□□ -0.3
CLP1-205ENST00000533682 SLC20A2Q08357 652 aa13.18□□□□□ -0.3
CLP1-205ENST00000533682 BAATQ14032 418 aaPredicted RBP13.18□□□□□ -0.3
CLP1-205ENST00000533682 KNOP1Q1ED39 458 aaKnown RBP13.18□□□□□ -0.3
CLP1-205ENST00000533682 ZNF569Q5MCW4 686 aa13.18□□□□□ -0.3
CLP1-205ENST00000533682 MYCT1Q8N699 235 aa13.18□□□□□ -0.3
CLP1-205ENST00000533682 RMDN3Q96TC7 470 aa13.18□□□□□ -0.3
CLP1-205ENST00000533682 CARD6Q9BX69 1037 aa13.18□□□□□ -0.3
CLP1-205ENST00000533682 NHEJ1Q9H9Q4 299 aaPredicted RBP13.18□□□□□ -0.3
CLP1-205ENST00000533682 RCCD1A6NED2 376 aa13.18□□□□□ -0.3
CLP1-205ENST00000533682 ZBED4O75132 1171 aa13.18□□□□□ -0.3
CLP1-205ENST00000533682 TBCAO75347 108 aaKnown RBP13.18□□□□□ -0.3
CLP1-205ENST00000533682 CASP4P49662 377 aa13.18□□□□□ -0.3
CLP1-205ENST00000533682 HERVK_113P62684 666 aa13.18□□□□□ -0.3
CLP1-205ENST00000533682 SETQ01105 290 aaPredicted RBP13.18□□□□□ -0.3
CLP1-205ENST00000533682 MTMR1Q13613 665 aa13.18□□□□□ -0.3
CLP1-205ENST00000533682 PGM5Q15124 567 aa13.18□□□□□ -0.3
CLP1-205ENST00000533682 MEA1Q16626 185 aa13.18□□□□□ -0.3
CLP1-205ENST00000533682 TSR1Q2NL82 804 aaKnown RBP13.18□□□□□ -0.3
CLP1-205ENST00000533682 ARHGAP29Q52LW3 1261 aa13.18□□□□□ -0.3
CLP1-205ENST00000533682 RNF207Q6ZRF8 634 aa13.18□□□□□ -0.3
CLP1-205ENST00000533682 KRT26Q7Z3Y9 468 aa13.18□□□□□ -0.3
CLP1-205ENST00000533682 MCF2L2Q86YR7 1114 aa13.18□□□□□ -0.3
CLP1-205ENST00000533682 NLRC4Q9NPP4 1024 aa13.18□□□□□ -0.3
CLP1-205ENST00000533682 TELO2Q9Y4R8 837 aa13.18□□□□□ -0.3
CLP1-205ENST00000533682 SAMM50Q9Y512 469 aa13.18□□□□□ -0.3
CLP1-205ENST00000533682 DUSP10Q9Y6W6 482 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms