RNA–Protein interactions for RNA: ENST00000533595.5

SF3B2-214, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-214ENST00000533595 EML1O00423 815 aa16.41■□□□□ 0.22
SF3B2-214ENST00000533595 LAD1O00515 517 aa16.41■□□□□ 0.22
SF3B2-214ENST00000533595 TLR3O15455 904 aaKnown RBP16.41■□□□□ 0.22
SF3B2-214ENST00000533595 MARK3P27448 753 aa16.41■□□□□ 0.22
SF3B2-214ENST00000533595 SLC26A2P50443 739 aa16.41■□□□□ 0.22
SF3B2-214ENST00000533595 SPIRE1Q08AE8 756 aa16.41■□□□□ 0.22
SF3B2-214ENST00000533595 PDXDC2PQ6P474 469 aa16.41■□□□□ 0.22
SF3B2-214ENST00000533595 FAM126BQ8IXS8 530 aa16.41■□□□□ 0.22
SF3B2-214ENST00000533595 C7orf61Q8IZ16 206 aa16.41■□□□□ 0.22
SF3B2-214ENST00000533595 RNPEPQ9H4A4 650 aa16.41■□□□□ 0.22
SF3B2-214ENST00000533595 HDAC6Q9UBN7 1215 aa16.41■□□□□ 0.22
SF3B2-214ENST00000533595 GABBR1Q9UBS5 961 aa16.41■□□□□ 0.22
SF3B2-214ENST00000533595 GTF2IRD1Q9UHL9 959 aa16.41■□□□□ 0.22
SF3B2-214ENST00000533595 MAFBQ9Y5Q3 323 aaPredicted RBP16.41■□□□□ 0.22
SF3B2-214ENST00000533595 CEP290O15078 2479 aa16.41■□□□□ 0.22
SF3B2-214ENST00000533595 B4GALT4O60513 344 aa16.4■□□□□ 0.22
SF3B2-214ENST00000533595 SMIM10L2AP0DMW4 78 aa16.4■□□□□ 0.22
SF3B2-214ENST00000533595 SMIM10L2BP0DMW5 78 aa16.4■□□□□ 0.22
SF3B2-214ENST00000533595 PKP1Q13835 747 aa16.4■□□□□ 0.22
SF3B2-214ENST00000533595 PLCB4Q15147 1175 aa16.4■□□□□ 0.22
SF3B2-214ENST00000533595 FOXD4L5Q5VV16 416 aaPredicted RBP16.4■□□□□ 0.22
SF3B2-214ENST00000533595 NCAPH2Q6IBW4 605 aa16.4■□□□□ 0.22
SF3B2-214ENST00000533595 FAM173BQ6P4H8 233 aa16.4■□□□□ 0.22
SF3B2-214ENST00000533595 FOXD4L4Q8WXT5 416 aaPredicted RBP16.4■□□□□ 0.22
SF3B2-214ENST00000533595 TNPO1Q92973 898 aaKnown RBP16.4■□□□□ 0.22
SF3B2-214ENST00000533595 TRPV6Q9H1D0 765 aa16.4■□□□□ 0.22
SF3B2-214ENST00000533595 DAXXQ9UER7 740 aaPredicted RBP16.4■□□□□ 0.22
SF3B2-214ENST00000533595 NR2E3Q9Y5X4 410 aa16.4■□□□□ 0.22
SF3B2-214ENST00000533595 MYH9P35579 1960 aaKnown RBP16.4■□□□□ 0.22
SF3B2-214ENST00000533595 IGSF9BQ9UPX0 1349 aa16.4■□□□□ 0.22
SF3B2-214ENST00000533595 C17orf102A2RUQ5 167 aa16.39■□□□□ 0.21
SF3B2-214ENST00000533595 BMP15O95972 392 aa16.39■□□□□ 0.21
SF3B2-214ENST00000533595 F13A1P00488 732 aa16.39■□□□□ 0.21
SF3B2-214ENST00000533595 CD4P01730 458 aa16.39■□□□□ 0.21
SF3B2-214ENST00000533595 CLTBP09497 229 aa16.39■□□□□ 0.21
SF3B2-214ENST00000533595 PRPHP41219 470 aa16.39■□□□□ 0.21
SF3B2-214ENST00000533595 TECP42680 631 aa16.39■□□□□ 0.21
SF3B2-214ENST00000533595 ATP2C1P98194 919 aaPredicted RBP16.39■□□□□ 0.21
SF3B2-214ENST00000533595 FAAP100Q0VG06 881 aa16.39■□□□□ 0.21
SF3B2-214ENST00000533595 EPHA7Q15375 998 aa16.39■□□□□ 0.21
SF3B2-214ENST00000533595 TMEM266Q2M3C6 531 aa16.39■□□□□ 0.21
SF3B2-214ENST00000533595 GDF6Q6KF10 455 aaPredicted RBP16.39■□□□□ 0.21
SF3B2-214ENST00000533595 CKAP2LQ8IYA6 745 aa16.39■□□□□ 0.21
SF3B2-214ENST00000533595 ATP6V0A1Q93050 837 aa16.39■□□□□ 0.21
SF3B2-214ENST00000533595 TRMT13Q9NUP7 481 aaKnown RBP16.39■□□□□ 0.21
SF3B2-214ENST00000533595 CEP131Q9UPN4 1083 aa16.39■□□□□ 0.21
SF3B2-214ENST00000533595 TRPC6Q9Y210 931 aa16.39■□□□□ 0.21
SF3B2-214ENST00000533595 POTEB3A0JP26 581 aa16.38■□□□□ 0.21
SF3B2-214ENST00000533595 POTEMA6NI47 508 aa16.38■□□□□ 0.21
SF3B2-214ENST00000533595 P4HBP07237 508 aaKnown RBP16.38■□□□□ 0.21
SF3B2-214ENST00000533595 GNAT1P11488 350 aa16.38■□□□□ 0.21
SF3B2-214ENST00000533595 FXR2P51116 673 aaKnown RBP eCLIP16.38■□□□□ 0.213e-8■■■□□ 15.1
SF3B2-214ENST00000533595 PPFIA1Q13136 1202 aa16.38■□□□□ 0.21
SF3B2-214ENST00000533595 SF3A1Q15459 793 aaKnown RBP16.38■□□□□ 0.21
SF3B2-214ENST00000533595 PTGISQ16647 500 aa16.38■□□□□ 0.21
SF3B2-214ENST00000533595 UGCGQ16739 394 aa16.38■□□□□ 0.21
SF3B2-214ENST00000533595 POTEBQ6S5H4 581 aa16.38■□□□□ 0.21
SF3B2-214ENST00000533595 DTHD1Q6ZMT9 781 aa16.38■□□□□ 0.21
SF3B2-214ENST00000533595 BANK1Q8NDB2 785 aa16.38■□□□□ 0.21
SF3B2-214ENST00000533595 ATP8B4Q8TF62 1192 aa16.38■□□□□ 0.21
SF3B2-214ENST00000533595 PDLIM7Q9NR12 457 aa16.38■□□□□ 0.21
SF3B2-214ENST00000533595 TMEM39AQ9NV64 488 aa16.38■□□□□ 0.21
SF3B2-214ENST00000533595 SETD4Q9NVD3 440 aa16.38■□□□□ 0.21
SF3B2-214ENST00000533595 PRKAG2Q9UGJ0 569 aa16.38■□□□□ 0.21
SF3B2-214ENST00000533595 NOD1Q9Y239 953 aa16.38■□□□□ 0.21
SF3B2-214ENST00000533595 WDR81Q562E7 1941 aa16.38■□□□□ 0.21
SF3B2-214ENST00000533595 NRCAMQ92823 1304 aa16.38■□□□□ 0.21
SF3B2-214ENST00000533595 KAT6AQ92794 2004 aa16.38■□□□□ 0.21
SF3B2-214ENST00000533595 ZNF862O60290 1169 aa16.37■□□□□ 0.21
SF3B2-214ENST00000533595 HBP1O60381 514 aa16.37■□□□□ 0.21
SF3B2-214ENST00000533595 BRD1O95696 1058 aa16.37■□□□□ 0.21
SF3B2-214ENST00000533595 INSRRP14616 1297 aa16.37■□□□□ 0.21
SF3B2-214ENST00000533595 ATP4AP20648 1035 aa16.37■□□□□ 0.21
SF3B2-214ENST00000533595 HOXC8P31273 242 aa16.37■□□□□ 0.21
SF3B2-214ENST00000533595 QARSP47897 775 aaKnown RBP16.37■□□□□ 0.21
SF3B2-214ENST00000533595 PSMC5P62195 406 aa16.37■□□□□ 0.21
SF3B2-214ENST00000533595 PRKCEQ02156 737 aa16.37■□□□□ 0.21
SF3B2-214ENST00000533595 GRIK4Q16099 956 aa16.37■□□□□ 0.21
SF3B2-214ENST00000533595 ARL6IP4Q66PJ3 421 aaKnown RBP16.37■□□□□ 0.21
SF3B2-214ENST00000533595 LMBR1Q8WVP7 490 aa16.37■□□□□ 0.21
SF3B2-214ENST00000533595 BBXQ8WY36 941 aaPredicted RBP16.37■□□□□ 0.21
SF3B2-214ENST00000533595 FAM167AQ96KS9 214 aa16.37■□□□□ 0.21
SF3B2-214ENST00000533595 EIF2AK1Q9BQI3 630 aaKnown RBP16.37■□□□□ 0.21
SF3B2-214ENST00000533595 RAB34Q9BZG1 259 aa16.37■□□□□ 0.21
SF3B2-214ENST00000533595 PRDM5Q9NQX1 630 aaPredicted RBP16.37■□□□□ 0.21
SF3B2-214ENST00000533595 CLIC4Q9Y696 253 aa16.37■□□□□ 0.21
SF3B2-214ENST00000533595 RRN3P2A6NIE6 340 aa16.36■□□□□ 0.21
SF3B2-214ENST00000533595 DKC1O60832 514 aaKnown RBP eCLIP16.36■□□□□ 0.21
SF3B2-214ENST00000533595 OATP04181 439 aa16.36■□□□□ 0.21
SF3B2-214ENST00000533595 ZNF200P98182 395 aaPredicted RBP16.36■□□□□ 0.21
SF3B2-214ENST00000533595 CEBPZQ03701 1054 aaKnown RBP16.36■□□□□ 0.21
SF3B2-214ENST00000533595 HIC1Q14526 733 aa16.36■□□□□ 0.21
SF3B2-214ENST00000533595 PDIA5Q14554 519 aa16.36■□□□□ 0.21
SF3B2-214ENST00000533595 TRMT1LQ7Z2T5 733 aaKnown RBP16.36■□□□□ 0.21
SF3B2-214ENST00000533595 SH3RF1Q7Z6J0 888 aa16.36■□□□□ 0.21
SF3B2-214ENST00000533595 NEK9Q8TD19 979 aa16.36■□□□□ 0.21
SF3B2-214ENST00000533595 DYDC2Q96IM9 177 aa16.36■□□□□ 0.21
SF3B2-214ENST00000533595 ZNF396Q96N95 335 aaPredicted RBP16.36■□□□□ 0.21
SF3B2-214ENST00000533595 LXNQ9BS40 222 aa16.36■□□□□ 0.21
SF3B2-214ENST00000533595 FTOQ9C0B1 505 aaKnown RBP eCLIP16.36■□□□□ 0.217e-6■□□□□ 10.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms