RNA–Protein interactions for RNA: ENST00000533572.5

CTSB-229, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-229ENST00000533572 NEMFO60524 1076 aa19.42■□□□□ 0.7
CTSB-229ENST00000533572 FAM86B2P0C5J1 330 aa19.42■□□□□ 0.7
CTSB-229ENST00000533572 PRR16Q569H4 304 aa19.42■□□□□ 0.7
CTSB-229ENST00000533572 CAGE1Q8TC20 777 aa19.42■□□□□ 0.7
CTSB-229ENST00000533572 SEPT1Q8WYJ6 367 aa19.42■□□□□ 0.7
CTSB-229ENST00000533572 FAM20AQ96MK3 541 aa19.42■□□□□ 0.7
CTSB-229ENST00000533572 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.42■□□□□ 0.79e-8■■■■■ 55.1
CTSB-229ENST00000533572 WNT8AQ9H1J5 351 aa19.42■□□□□ 0.7
CTSB-229ENST00000533572 CFAP45Q9UL16 551 aa19.42■□□□□ 0.7
CTSB-229ENST00000533572 C17orf102A2RUQ5 167 aa19.41■□□□□ 0.7
CTSB-229ENST00000533572 EDIL3O43854 480 aa19.41■□□□□ 0.7
CTSB-229ENST00000533572 MARCH6O60337 910 aa19.41■□□□□ 0.7
CTSB-229ENST00000533572 TDP2O95551 362 aa19.41■□□□□ 0.7
CTSB-229ENST00000533572 ACRP10323 421 aa19.41■□□□□ 0.7
CTSB-229ENST00000533572 ATP2B1P20020 1258 aa19.41■□□□□ 0.7
CTSB-229ENST00000533572 TCF7P36402 384 aaPredicted RBP19.41■□□□□ 0.7
CTSB-229ENST00000533572 TOB1P50616 345 aaPredicted RBP19.41■□□□□ 0.7
CTSB-229ENST00000533572 SLFN12Q8IYM2 578 aa19.41■□□□□ 0.7
CTSB-229ENST00000533572 CYP2W1Q8TAV3 490 aa19.41■□□□□ 0.7
CTSB-229ENST00000533572 SCLYQ96I15 445 aa19.41■□□□□ 0.7
CTSB-229ENST00000533572 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.41■□□□□ 0.7
CTSB-229ENST00000533572 TBC1D22BQ9NU19 505 aa19.41■□□□□ 0.7
CTSB-229ENST00000533572 SLC9A2Q9UBY0 812 aa19.41■□□□□ 0.7
CTSB-229ENST00000533572 TCEAL9Q9UHQ7 104 aa19.41■□□□□ 0.7
CTSB-229ENST00000533572 ZDHHC9Q9Y397 364 aa19.41■□□□□ 0.7
CTSB-229ENST00000533572 PFKMP08237 780 aa19.4■□□□□ 0.7
CTSB-229ENST00000533572 ARP10275 920 aa19.4■□□□□ 0.7
CTSB-229ENST00000533572 GNAT1P11488 350 aa19.4■□□□□ 0.7
CTSB-229ENST00000533572 MCM7P33993 719 aa19.4■□□□□ 0.7
CTSB-229ENST00000533572 RFC2P35250 354 aa19.4■□□□□ 0.7
CTSB-229ENST00000533572 TMEM240Q5SV17 173 aa19.4■□□□□ 0.7
CTSB-229ENST00000533572 GPR153Q6NV75 609 aa19.4■□□□□ 0.7
CTSB-229ENST00000533572 ZNF365Q70YC5 407 aa19.4■□□□□ 0.7
CTSB-229ENST00000533572 TRIM50Q86XT4 487 aa19.4■□□□□ 0.7
CTSB-229ENST00000533572 GLG1Q92896 1179 aa19.4■□□□□ 0.7
CTSB-229ENST00000533572 ZNF577Q9BSK1 485 aa19.4■□□□□ 0.7
CTSB-229ENST00000533572 AZI2Q9H6S1 392 aa19.4■□□□□ 0.7
CTSB-229ENST00000533572 AGO4Q9HCK5 861 aaKnown RBP19.4■□□□□ 0.7
CTSB-229ENST00000533572 NFASCO94856 1347 aa19.4■□□□□ 0.7
CTSB-229ENST00000533572 LAMA3Q16787 3333 aa19.39■□□□□ 0.69
CTSB-229ENST00000533572 IPO5O00410 1097 aaKnown RBP19.39■□□□□ 0.69
CTSB-229ENST00000533572 FGBP02675 491 aa19.39■□□□□ 0.69
CTSB-229ENST00000533572 SMIM10L2AP0DMW4 78 aa19.39■□□□□ 0.69
CTSB-229ENST00000533572 SMIM10L2BP0DMW5 78 aa19.39■□□□□ 0.69
CTSB-229ENST00000533572 PTK7Q13308 1070 aa19.39■□□□□ 0.69
CTSB-229ENST00000533572 CALCRLQ16602 461 aa19.39■□□□□ 0.69
CTSB-229ENST00000533572 FOXD4L5Q5VV16 416 aaPredicted RBP19.39■□□□□ 0.69
CTSB-229ENST00000533572 AFAP1L1Q8TED9 768 aa19.39■□□□□ 0.69
CTSB-229ENST00000533572 FOXD4L4Q8WXT5 416 aaPredicted RBP19.39■□□□□ 0.69
CTSB-229ENST00000533572 LENG9Q96B70 501 aa19.39■□□□□ 0.69
CTSB-229ENST00000533572 RIT2Q99578 217 aa19.39■□□□□ 0.69
CTSB-229ENST00000533572 KCNMB3Q9NPA1 279 aa19.39■□□□□ 0.69
CTSB-229ENST00000533572 MORC2Q9Y6X9 1032 aaPredicted RBP19.39■□□□□ 0.69
CTSB-229ENST00000533572 PRPHP41219 470 aa19.38■□□□□ 0.69
CTSB-229ENST00000533572 KRT85P78386 507 aa19.38■□□□□ 0.69
CTSB-229ENST00000533572 ZNF174Q15697 407 aa19.38■□□□□ 0.69
CTSB-229ENST00000533572 DEFB128Q7Z7B8 93 aa19.38■□□□□ 0.69
CTSB-229ENST00000533572 ATP6V0A1Q93050 837 aa19.38■□□□□ 0.69
CTSB-229ENST00000533572 FTOQ9C0B1 505 aaKnown RBP eCLIP19.38■□□□□ 0.693e-19■□□□□ 9.3
CTSB-229ENST00000533572 SMARCAD1Q9H4L7 1026 aa19.38■□□□□ 0.69
CTSB-229ENST00000533572 ERAP1Q9NZ08 941 aa19.38■□□□□ 0.69
CTSB-229ENST00000533572 PCDHB6Q9Y5E3 794 aa19.38■□□□□ 0.69
CTSB-229ENST00000533572 GSTTP1A0A1W2PQM5 241 aa19.37■□□□□ 0.69
CTSB-229ENST00000533572 ZBBXA8MT70 800 aa19.37■□□□□ 0.69
CTSB-229ENST00000533572 DDX39AO00148 427 aaKnown RBP19.37■□□□□ 0.69
CTSB-229ENST00000533572 MSH4O15457 936 aa19.37■□□□□ 0.69
CTSB-229ENST00000533572 SLC37A4O43826 429 aa19.37■□□□□ 0.69
CTSB-229ENST00000533572 YEATS4O95619 227 aa19.37■□□□□ 0.69
CTSB-229ENST00000533572 OR52Z1P0C646 297 aa19.37■□□□□ 0.69
CTSB-229ENST00000533572 IQCF3P0C7M6 154 aa19.37■□□□□ 0.69
CTSB-229ENST00000533572 ACTN1P12814 892 aa19.37■□□□□ 0.69
CTSB-229ENST00000533572 SELPP16109 830 aa19.37■□□□□ 0.69
CTSB-229ENST00000533572 SMAD3P84022 425 aaKnown RBP19.37■□□□□ 0.69
CTSB-229ENST00000533572 SF3A1Q15459 793 aaKnown RBP19.37■□□□□ 0.69
CTSB-229ENST00000533572 ARL6IP4Q66PJ3 421 aaKnown RBP19.37■□□□□ 0.69
CTSB-229ENST00000533572 LRRC8DQ7L1W4 858 aa19.37■□□□□ 0.69
CTSB-229ENST00000533572 C16orf59Q7L2K0 433 aa19.37■□□□□ 0.69
CTSB-229ENST00000533572 ETNPPLQ8TBG4 499 aa19.37■□□□□ 0.69
CTSB-229ENST00000533572 SLC5A5Q92911 643 aa19.37■□□□□ 0.69
CTSB-229ENST00000533572 TNPO1Q92973 898 aaKnown RBP19.37■□□□□ 0.69
CTSB-229ENST00000533572 TELO2Q9Y4R8 837 aa19.37■□□□□ 0.69
CTSB-229ENST00000533572 EMSYQ7Z589 1322 aa19.36■□□□□ 0.69
CTSB-229ENST00000533572 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.36■□□□□ 0.69
CTSB-229ENST00000533572 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.36■□□□□ 0.69
CTSB-229ENST00000533572 PARNO95453 639 aaKnown RBP19.36■□□□□ 0.69
CTSB-229ENST00000533572 MARK3P27448 753 aa19.36■□□□□ 0.69
CTSB-229ENST00000533572 NASPP49321 788 aaPredicted RBP19.36■□□□□ 0.69
CTSB-229ENST00000533572 ACTR2P61160 394 aa19.36■□□□□ 0.69
CTSB-229ENST00000533572 ZNF200P98182 395 aaPredicted RBP19.36■□□□□ 0.69
CTSB-229ENST00000533572 ATP2C1P98194 919 aaPredicted RBP19.36■□□□□ 0.69
CTSB-229ENST00000533572 PTGDRQ13258 359 aa19.36■□□□□ 0.69
CTSB-229ENST00000533572 ITGB3BPQ13352 177 aaPredicted RBP19.36■□□□□ 0.69
CTSB-229ENST00000533572 TMEM266Q2M3C6 531 aa19.36■□□□□ 0.69
CTSB-229ENST00000533572 OTOP2Q7RTS6 562 aa19.36■□□□□ 0.69
CTSB-229ENST00000533572 POTEDQ86YR6 584 aa19.36■□□□□ 0.69
CTSB-229ENST00000533572 HERVK_113Q902F9 699 aa19.36■□□□□ 0.69
CTSB-229ENST00000533572 DHX38Q92620 1227 aaKnown RBP19.36■□□□□ 0.69
CTSB-229ENST00000533572 MTMR9Q96QG7 549 aa19.36■□□□□ 0.69
CTSB-229ENST00000533572 TEKT3Q9BXF9 490 aa19.36■□□□□ 0.69
CTSB-229ENST00000533572 RAB34Q9BZG1 259 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms