RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 FNTAP49354 379 aa18.22■□□□□ 0.51
CTSB-228ENST00000533455 KCNH2Q12809 1159 aa18.22■□□□□ 0.51
CTSB-228ENST00000533455 ADAM9Q13443 819 aa18.22■□□□□ 0.51
CTSB-228ENST00000533455 TRADDQ15628 312 aa18.22■□□□□ 0.51
CTSB-228ENST00000533455 GPBP1Q86WP2 473 aa18.22■□□□□ 0.51
CTSB-228ENST00000533455 LRRC47Q8N1G4 583 aaKnown RBP18.22■□□□□ 0.51
CTSB-228ENST00000533455 PRPF38AQ8NAV1 312 aaKnown RBP18.22■□□□□ 0.51
CTSB-228ENST00000533455 CEP89Q96ST8 783 aa18.22■□□□□ 0.51
CTSB-228ENST00000533455 SWAP70Q9UH65 585 aa18.22■□□□□ 0.51
CTSB-228ENST00000533455 UBAP1LF5GYI3 381 aa18.21■□□□□ 0.51
CTSB-228ENST00000533455 KCNK3O14649 394 aa18.21■□□□□ 0.51
CTSB-228ENST00000533455 SSBP05455 408 aaKnown RBP eCLIP18.21■□□□□ 0.51
CTSB-228ENST00000533455 PRKCIP41743 596 aa18.21■□□□□ 0.51
CTSB-228ENST00000533455 MRPL12P52815 198 aaKnown RBP18.21■□□□□ 0.51
CTSB-228ENST00000533455 ARID5AQ03989 594 aa18.21■□□□□ 0.51
CTSB-228ENST00000533455 PTK2Q05397 1052 aa18.21■□□□□ 0.51
CTSB-228ENST00000533455 GABPAQ06546 454 aa18.21■□□□□ 0.51
CTSB-228ENST00000533455 HERC4Q5GLZ8 1057 aaPredicted RBP18.21■□□□□ 0.51
CTSB-228ENST00000533455 CEP85LQ5SZL2 805 aa18.21■□□□□ 0.51
CTSB-228ENST00000533455 ZNF571Q7Z3V5 609 aaPredicted RBP18.21■□□□□ 0.51
CTSB-228ENST00000533455 FRMD5Q7Z6J6 570 aa18.21■□□□□ 0.51
CTSB-228ENST00000533455 NLRP14Q86W24 1093 aa18.21■□□□□ 0.51
CTSB-228ENST00000533455 KLHL7Q8IXQ5 586 aa18.21■□□□□ 0.51
CTSB-228ENST00000533455 ARFGAP2Q8N6H7 521 aa18.21■□□□□ 0.51
CTSB-228ENST00000533455 LRRC45Q96CN5 670 aa18.21■□□□□ 0.51
CTSB-228ENST00000533455 GPR101Q96P66 508 aaPredicted RBP18.21■□□□□ 0.51
CTSB-228ENST00000533455 ATF5Q9Y2D1 282 aaPredicted RBP18.21■□□□□ 0.51
CTSB-228ENST00000533455 MARCH6O60337 910 aa18.2■□□□□ 0.5
CTSB-228ENST00000533455 HNRNPH1P31943 449 aaKnown RBP18.2■□□□□ 0.5
CTSB-228ENST00000533455 USP8P40818 1118 aa18.2■□□□□ 0.5
CTSB-228ENST00000533455 KCNV1Q6PIU1 500 aa18.2■□□□□ 0.5
CTSB-228ENST00000533455 MAATS1Q7Z4T9 603 aa18.2■□□□□ 0.5
CTSB-228ENST00000533455 ADGRF4Q8IZF3 695 aa18.2■□□□□ 0.5
CTSB-228ENST00000533455 OTUD6BQ8N6M0 293 aa18.2■□□□□ 0.5
CTSB-228ENST00000533455 MYCBPAPQ8TBZ2 947 aa18.2■□□□□ 0.5
CTSB-228ENST00000533455 KANSL2Q9H9L4 492 aa18.2■□□□□ 0.5
CTSB-228ENST00000533455 GPCPD1Q9NPB8 672 aa18.2■□□□□ 0.5
CTSB-228ENST00000533455 HDAC9Q9UKV0 1011 aa18.2■□□□□ 0.5
CTSB-228ENST00000533455 KIAA1024Q9UPX6 916 aa18.2■□□□□ 0.5
CTSB-228ENST00000533455 H0YGN5 161 aa18.2■□□□□ 0.5
CTSB-228ENST00000533455 HSD17B3P37058 310 aa18.2■□□□□ 0.5
CTSB-228ENST00000533455 TRAF3IP3Q9Y228 551 aa18.2■□□□□ 0.5
CTSB-228ENST00000533455 NFS1Q9Y697 457 aa18.2■□□□□ 0.5
CTSB-228ENST00000533455 NPHP3-ACAD11A0A0J9YXS1 232 aa18.19■□□□□ 0.5
CTSB-228ENST00000533455 POTEB3A0JP26 581 aa18.19■□□□□ 0.5
CTSB-228ENST00000533455 GOLGA6L10A6NI86 522 aa18.19■□□□□ 0.5
CTSB-228ENST00000533455 POTECB2RU33 542 aa18.19■□□□□ 0.5
CTSB-228ENST00000533455 CCDC188H7C350 402 aa18.19■□□□□ 0.5
CTSB-228ENST00000533455 PGRMC1O00264 195 aaKnown RBP18.19■□□□□ 0.5
CTSB-228ENST00000533455 GNPATO15228 680 aa18.19■□□□□ 0.5
CTSB-228ENST00000533455 FAM107AO95990 144 aa18.19■□□□□ 0.5
CTSB-228ENST00000533455 AKR1B1P15121 316 aa18.19■□□□□ 0.5
CTSB-228ENST00000533455 SLC12A3P55017 1021 aa18.19■□□□□ 0.5
CTSB-228ENST00000533455 RNASE9P60153 205 aaKnown RBP18.19■□□□□ 0.5
CTSB-228ENST00000533455 GPSM2P81274 684 aa18.19■□□□□ 0.5
CTSB-228ENST00000533455 FBXW10Q5XX13 1052 aa18.19■□□□□ 0.5
CTSB-228ENST00000533455 POTEBQ6S5H4 581 aa18.19■□□□□ 0.5
CTSB-228ENST00000533455 C3orf20Q8ND61 904 aa18.19■□□□□ 0.5
CTSB-228ENST00000533455 GJA10Q969M2 543 aa18.19■□□□□ 0.5
CTSB-228ENST00000533455 CCT8L2Q96SF2 557 aa18.19■□□□□ 0.5
CTSB-228ENST00000533455 KCNMB3Q9NPA1 279 aa18.19■□□□□ 0.5
CTSB-228ENST00000533455 NAGPAQ9UK23 515 aa18.19■□□□□ 0.5
CTSB-228ENST00000533455 FBXL5Q9UKA1 691 aa18.19■□□□□ 0.5
CTSB-228ENST00000533455 BTAF1O14981 1849 aa18.19■□□□□ 0.5
CTSB-228ENST00000533455 TAF1LQ8IZX4 1826 aa18.18■□□□□ 0.5
CTSB-228ENST00000533455 A0A0A6YYK5 440 aaPredicted RBP18.18■□□□□ 0.5
CTSB-228ENST00000533455 AFPP02771 609 aaKnown RBP18.18■□□□□ 0.5
CTSB-228ENST00000533455 UCHL3P15374 230 aa18.18■□□□□ 0.5
CTSB-228ENST00000533455 ATP2B4P23634 1241 aa18.18■□□□□ 0.5
CTSB-228ENST00000533455 NR2F2P24468 414 aa18.18■□□□□ 0.5
CTSB-228ENST00000533455 HLTFQ14527 1009 aaKnown RBP eCLIP18.18■□□□□ 0.5
CTSB-228ENST00000533455 UAP1Q16222 522 aaPredicted RBP18.18■□□□□ 0.5
CTSB-228ENST00000533455 SLFN11Q7Z7L1 901 aa18.18■□□□□ 0.5
CTSB-228ENST00000533455 RASGEF1CQ8N431 466 aa18.18■□□□□ 0.5
CTSB-228ENST00000533455 MBOAT7Q96N66 472 aa18.18■□□□□ 0.5
CTSB-228ENST00000533455 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.18■□□□□ 0.51e-7■■■■■ 39.4
CTSB-228ENST00000533455 CAPN7Q9Y6W3 813 aa18.18■□□□□ 0.5
CTSB-228ENST00000533455 MYO3BQ8WXR4 1341 aa18.18■□□□□ 0.5
CTSB-228ENST00000533455 ZBTB5O15062 677 aa18.18■□□□□ 0.5
CTSB-228ENST00000533455 CEP104O60308 925 aa18.18■□□□□ 0.5
CTSB-228ENST00000533455 TTLL1O95922 423 aa18.18■□□□□ 0.5
CTSB-228ENST00000533455 ACTN1P12814 892 aa18.18■□□□□ 0.5
CTSB-228ENST00000533455 CACNB1Q02641 598 aaPredicted RBP18.18■□□□□ 0.5
CTSB-228ENST00000533455 BIRC3Q13489 604 aa18.18■□□□□ 0.5
CTSB-228ENST00000533455 ENOX2Q16206 610 aaKnown RBP18.18■□□□□ 0.5
CTSB-228ENST00000533455 ARSHQ5FYA8 562 aa18.18■□□□□ 0.5
CTSB-228ENST00000533455 TPCN2Q8NHX9 752 aa18.18■□□□□ 0.5
CTSB-228ENST00000533455 SPAG5Q96R06 1193 aa18.18■□□□□ 0.5
CTSB-228ENST00000533455 GLT8D2Q9H1C3 349 aa18.18■□□□□ 0.5
CTSB-228ENST00000533455 DHX36Q9H2U1 1008 aaKnown RBP18.18■□□□□ 0.5
CTSB-228ENST00000533455 STXBP5LQ9Y2K9 1186 aa18.18■□□□□ 0.5
CTSB-228ENST00000533455 CYP3A7-CYP3A51PA0A087WV96 503 aa18.17■□□□□ 0.5
CTSB-228ENST00000533455 GCOM1H8Y6P7 765 aaPredicted RBP18.17■□□□□ 0.5
CTSB-228ENST00000533455 MYZAPP0CAP1 466 aa18.17■□□□□ 0.5
CTSB-228ENST00000533455 SLC9A1P19634 815 aa18.17■□□□□ 0.5
CTSB-228ENST00000533455 CYP3A7P24462 503 aa18.17■□□□□ 0.5
CTSB-228ENST00000533455 MTMR3Q13615 1198 aa18.17■□□□□ 0.5
CTSB-228ENST00000533455 GPATCH4Q5T3I0 446 aaKnown RBP18.17■□□□□ 0.5
CTSB-228ENST00000533455 ALKBH5Q6P6C2 394 aaKnown RBP18.17■□□□□ 0.5
CTSB-228ENST00000533455 DPP8Q6V1X1 898 aaPredicted RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms