RNA–Protein interactions for RNA: ENST00000533145.5

HIF3A-215, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-215ENST00000533145 COPS5Q92905 334 aa15.79■□□□□ 0.12
HIF3A-215ENST00000533145 SYAP1Q96A49 352 aaPredicted RBP15.79■□□□□ 0.12
HIF3A-215ENST00000533145 CDK5RAP3Q96JB5 506 aa15.79■□□□□ 0.12
HIF3A-215ENST00000533145 GPR20Q99678 358 aa15.79■□□□□ 0.12
HIF3A-215ENST00000533145 CLSTN2Q9H4D0 955 aa15.79■□□□□ 0.12
HIF3A-215ENST00000533145 PRDM10Q9NQV6 1147 aa15.79■□□□□ 0.12
HIF3A-215ENST00000533145 BLOC1S4Q9NUP1 217 aa15.79■□□□□ 0.12
HIF3A-215ENST00000533145 RGL1Q9NZL6 768 aa15.79■□□□□ 0.12
HIF3A-215ENST00000533145 SERTAD1Q9UHV2 236 aa15.79■□□□□ 0.12
HIF3A-215ENST00000533145 SAMM50Q9Y512 469 aa15.79■□□□□ 0.12
HIF3A-215ENST00000533145 TRIM17Q9Y577 477 aa15.79■□□□□ 0.12
HIF3A-215ENST00000533145 POTEB3A0JP26 581 aa15.78■□□□□ 0.12
HIF3A-215ENST00000533145 CTAGE5O15320 804 aa15.78■□□□□ 0.12
HIF3A-215ENST00000533145 LGR5O75473 907 aa15.78■□□□□ 0.12
HIF3A-215ENST00000533145 HSPA8P11142 646 aaKnown RBP15.78■□□□□ 0.12
HIF3A-215ENST00000533145 HOXD8P13378 290 aaPredicted RBP15.78■□□□□ 0.12
HIF3A-215ENST00000533145 AKR1A1P14550 325 aa15.78■□□□□ 0.12
HIF3A-215ENST00000533145 STAT6P42226 847 aa15.78■□□□□ 0.12
HIF3A-215ENST00000533145 PSMC5P62195 406 aa15.78■□□□□ 0.12
HIF3A-215ENST00000533145 MDM2Q00987 491 aaPredicted RBP15.78■□□□□ 0.12
HIF3A-215ENST00000533145 HSDL1Q3SXM5 330 aa15.78■□□□□ 0.12
HIF3A-215ENST00000533145 PDXDC2PQ6P474 469 aa15.78■□□□□ 0.12
HIF3A-215ENST00000533145 POTEBQ6S5H4 581 aa15.78■□□□□ 0.12
HIF3A-215ENST00000533145 CNNM3Q8NE01 707 aa15.78■□□□□ 0.12
HIF3A-215ENST00000533145 PPTC7Q8NI37 304 aa15.78■□□□□ 0.12
HIF3A-215ENST00000533145 AFAP1L1Q8TED9 768 aa15.78■□□□□ 0.12
HIF3A-215ENST00000533145 LRRC15Q8TF66 581 aa15.78■□□□□ 0.12
HIF3A-215ENST00000533145 DHX58Q96C10 678 aa15.78■□□□□ 0.12
HIF3A-215ENST00000533145 CCDC34Q96HJ3 373 aa15.78■□□□□ 0.12
HIF3A-215ENST00000533145 SPATA33Q96N06 139 aa15.78■□□□□ 0.12
HIF3A-215ENST00000533145 NACC1Q96RE7 527 aa15.78■□□□□ 0.12
HIF3A-215ENST00000533145 ZSWIM4Q9H7M6 989 aa15.78■□□□□ 0.12
HIF3A-215ENST00000533145 KBTBD4Q9NVX7 518 aa15.78■□□□□ 0.12
HIF3A-215ENST00000533145 TMEM63CQ9P1W3 806 aa15.78■□□□□ 0.12
HIF3A-215ENST00000533145 KIAA1024Q9UPX6 916 aa15.78■□□□□ 0.12
HIF3A-215ENST00000533145 TELO2Q9Y4R8 837 aa15.78■□□□□ 0.12
HIF3A-215ENST00000533145 MAFBQ9Y5Q3 323 aaPredicted RBP15.78■□□□□ 0.12
HIF3A-215ENST00000533145 POTEFA5A3E0 1075 aa15.77■□□□□ 0.12
HIF3A-215ENST00000533145 SEPT4O43236 478 aa15.77■□□□□ 0.12
HIF3A-215ENST00000533145 ADCY6O43306 1168 aa15.77■□□□□ 0.12
HIF3A-215ENST00000533145 DUSP11O75319 330 aaKnown RBP15.77■□□□□ 0.12
HIF3A-215ENST00000533145 PPFIA4O75335 1185 aa15.77■□□□□ 0.12
HIF3A-215ENST00000533145 ELNP15502 786 aa15.77■□□□□ 0.12
HIF3A-215ENST00000533145 NKX3-2P78367 333 aa15.77■□□□□ 0.12
HIF3A-215ENST00000533145 CTTNQ14247 550 aaKnown RBP15.77■□□□□ 0.12
HIF3A-215ENST00000533145 CCDC183Q5T5S1 534 aa15.77■□□□□ 0.12
HIF3A-215ENST00000533145 TPH2Q8IWU9 490 aa15.77■□□□□ 0.12
HIF3A-215ENST00000533145 CEP57L1Q8IYX8 460 aa15.77■□□□□ 0.12
HIF3A-215ENST00000533145 RASSF8Q8NHQ8 419 aa15.77■□□□□ 0.12
HIF3A-215ENST00000533145 ABHD8Q96I13 439 aa15.77■□□□□ 0.12
HIF3A-215ENST00000533145 LXNQ9BS40 222 aa15.77■□□□□ 0.12
HIF3A-215ENST00000533145 NUP62CLQ9H1M0 184 aa15.77■□□□□ 0.12
HIF3A-215ENST00000533145 DNM3Q9UQ16 869 aa15.77■□□□□ 0.12
HIF3A-215ENST00000533145 PTPN22Q9Y2R2 807 aa15.77■□□□□ 0.12
HIF3A-215ENST00000533145 EMSYQ7Z589 1322 aa15.76■□□□□ 0.11
HIF3A-215ENST00000533145 IGSF9BQ9UPX0 1349 aa15.76■□□□□ 0.11
HIF3A-215ENST00000533145 A6NJR5 290 aa15.76■□□□□ 0.11
HIF3A-215ENST00000533145 NOP56O00567 594 aaKnown RBP15.76■□□□□ 0.11
HIF3A-215ENST00000533145 LETM1O95202 739 aaPredicted RBP15.76■□□□□ 0.11
HIF3A-215ENST00000533145 EYA4O95677 639 aa15.76■□□□□ 0.11
HIF3A-215ENST00000533145 GRK4P32298 578 aa15.76■□□□□ 0.11
HIF3A-215ENST00000533145 CYP4A11Q02928 519 aa15.76■□□□□ 0.11
HIF3A-215ENST00000533145 TRIM32Q13049 653 aa15.76■□□□□ 0.11
HIF3A-215ENST00000533145 GJC2Q5T442 439 aaPredicted RBP15.76■□□□□ 0.11
HIF3A-215ENST00000533145 SWSAP1Q6NVH7 229 aa15.76■□□□□ 0.11
HIF3A-215ENST00000533145 CAVIN1Q6NZI2 390 aaKnown RBP15.76■□□□□ 0.11
HIF3A-215ENST00000533145 RBM43Q6ZSC3 357 aaKnown RBP15.76■□□□□ 0.11
HIF3A-215ENST00000533145 PLPPR4Q7Z2D5 763 aa15.76■□□□□ 0.11
HIF3A-215ENST00000533145 KCNK18Q7Z418 384 aa15.76■□□□□ 0.11
HIF3A-215ENST00000533145 CCDC60Q8IWA6 550 aaPredicted RBP15.76■□□□□ 0.11
HIF3A-215ENST00000533145 BANK1Q8NDB2 785 aa15.76■□□□□ 0.11
HIF3A-215ENST00000533145 LARP4BQ92615 738 aaKnown RBP15.76■□□□□ 0.11
HIF3A-215ENST00000533145 RAD54LQ92698 747 aa15.76■□□□□ 0.11
HIF3A-215ENST00000533145 ATP6V0A1Q93050 837 aa15.76■□□□□ 0.11
HIF3A-215ENST00000533145 PAGE5Q96GU1 130 aa15.76■□□□□ 0.11
HIF3A-215ENST00000533145 PCYT2Q99447 389 aa15.76■□□□□ 0.11
HIF3A-215ENST00000533145 PLIN2Q99541 437 aa15.76■□□□□ 0.11
HIF3A-215ENST00000533145 TNMDQ9H2S6 317 aa15.76■□□□□ 0.11
HIF3A-215ENST00000533145 WRAP73Q9P2S5 460 aaPredicted RBP15.76■□□□□ 0.11
HIF3A-215ENST00000533145 GABBR1Q9UBS5 961 aa15.76■□□□□ 0.11
HIF3A-215ENST00000533145 HOOK1Q9UJC3 728 aaKnown RBP15.76■□□□□ 0.11
HIF3A-215ENST00000533145 DBR1Q9UK59 544 aaKnown RBP15.76■□□□□ 0.11
HIF3A-215ENST00000533145 PTCH2Q9Y6C5 1203 aa15.76■□□□□ 0.11
HIF3A-215ENST00000533145 E9PMD0 336 aa15.75■□□□□ 0.11
HIF3A-215ENST00000533145 SORBS3O60504 671 aa15.75■□□□□ 0.11
HIF3A-215ENST00000533145 STBD1O95210 358 aa15.75■□□□□ 0.11
HIF3A-215ENST00000533145 MYL1P05976 194 aa15.75■□□□□ 0.11
HIF3A-215ENST00000533145 PRKAR2AP13861 404 aaKnown RBP15.75■□□□□ 0.11
HIF3A-215ENST00000533145 TCF7P36402 384 aaPredicted RBP15.75■□□□□ 0.11
HIF3A-215ENST00000533145 SLC26A2P50443 739 aa15.75■□□□□ 0.11
HIF3A-215ENST00000533145 PSMC6P62333 389 aa15.75■□□□□ 0.11
HIF3A-215ENST00000533145 AMPD3Q01432 767 aa15.75■□□□□ 0.11
HIF3A-215ENST00000533145 SP4Q02446 784 aa15.75■□□□□ 0.11
HIF3A-215ENST00000533145 ZRSR1Q15695 479 aaKnown RBP15.75■□□□□ 0.11
HIF3A-215ENST00000533145 FAM160B1Q5W0V3 765 aa15.75■□□□□ 0.11
HIF3A-215ENST00000533145 CNNM4Q6P4Q7 775 aa15.75■□□□□ 0.11
HIF3A-215ENST00000533145 POTEGQ6S5H5 508 aa15.75■□□□□ 0.11
HIF3A-215ENST00000533145 SV2BQ7L1I2 683 aa15.75■□□□□ 0.11
HIF3A-215ENST00000533145 SYT2Q8N9I0 419 aaPredicted RBP15.75■□□□□ 0.11
HIF3A-215ENST00000533145 OR6J1Q8NGC5 347 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms